miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49299_osa-miRf10084-akr:pmrd
Length = 101
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Minus
Query: 8 gttagggttccgtccattccacgccgttaagttctataggatgaacagtgtatttaacgg 67
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 92 gttagggttccgtccattccgcgccgttaagttctataggatgaatagtgtatttaacgg 33
Query: 68 catggaatggacggaaccctaacgacgatg 97
|||||||||||||||||||||||| |||||
Sbjct: 32 catggaatggacggaaccctaacggcgatg 3
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 1 catcgccgttagggttccgtccattccacgccgttaa 37
|||||||||||||||||||||||||||| ||||||||
Sbjct: 3 catcgccgttagggttccgtccattccatgccgttaa 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 61 ttaacggcatggaatggacggaaccctaac 90
|||||||| ||||||||||||||||||||
Sbjct: 63 ttaacggcgcggaatggacggaaccctaac 92
>49782_osa-miRf10567-akr:pmrd
Length = 95
Score = 153 bits (77), Expect = 3e-38
Identities = 86/89 (96%)
Strand = Plus / Minus
Query: 2 atcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtatt 61
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atcgcctttagggttccgtccattccacgccgttaagttctataggatgaacagtgtatt 36
Query: 62 taacggcatggaatggacggaaccctaac 90
||||||| ||||||||||||||||||||
Sbjct: 35 taacggcgcggaatggacggaaccctaac 7
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 8 gttagggttccgtccattccacgccgttaa 37
|||||||||||||||||||| |||||||||
Sbjct: 7 gttagggttccgtccattccgcgccgttaa 36
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 61 ttaacggcatggaatggacggaaccctaa 89
|||||||| ||||||||||||||||||||
Sbjct: 60 ttaacggcgtggaatggacggaaccctaa 88
>50994_osa-miRf11779-akr:pmrd
Length = 107
Score = 135 bits (68), Expect = 6e-33
Identities = 89/96 (92%)
Strand = Plus / Plus
Query: 1 catcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtat 60
|||| |||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||
Sbjct: 6 catcaccgttagggttccgtccattccgcgctgttaagttatatagaatgaacagtgtat 65
Query: 61 ttaacggcatggaatggacggaaccctaacgacgat 96
||||||||| ||||||||||||||||||||| ||||
Sbjct: 66 ttaacggcacggaatggacggaaccctaacggcgat 101
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 2 atcgccgttagggttccgtccattccacgccgttaa 37
|||||||||||||||||||||||||| ||||||||
Sbjct: 101 atcgccgttagggttccgtccattccgtgccgttaa 66
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 71 ggaatggacggaaccctaacg 91
|||||||||||||||||||||
Sbjct: 32 ggaatggacggaaccctaacg 12
>50691_osa-miRf11476-akr:pmrd
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 1 catcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtat 60
||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||
Sbjct: 2 catcgccgttagggttccgtccattccacaccgttaagttctataggatgaacaatatat 61
Query: 61 ttaacggcatggaatggacggaaccctaacgacgatg 97
|||||||| |||||| ||||||||||||||||||
Sbjct: 62 ttaacggcgcaaaatggatggaaccctaacgacgatg 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 61 ttaacggcatggaatggacggaaccctaacgacgatg 97
||||||| |||||||||||||||||||||| |||||
Sbjct: 38 ttaacggtgtggaatggacggaaccctaacggcgatg 2
>51074_osa-miRf11859-akr:pmrd
Length = 91
Score = 125 bits (63), Expect = 6e-30
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 7 cgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtatttaacg 66
||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 4 cgttagggttccgaccattccacgccattaagttctataggatgaacactgtatttaacg 63
Query: 67 gcatggaatggacggaaccctaa 89
||| |||||||| ||||||||||
Sbjct: 64 gcacggaatggatggaaccctaa 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 61 ttaacggcatggaatggacggaaccctaacgacg 94
|||| ||| |||||||| ||||||||||||||||
Sbjct: 34 ttaatggcgtggaatggtcggaaccctaacgacg 1
>49579_osa-miRf10364-akr:pmrd
Length = 98
Score = 113 bits (57), Expect = 2e-26
Identities = 88/97 (90%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 1 catcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtat 60
||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 97 catcgccgttaaggttccgtccattcc-cgccgttaagttctataggatgaatagtgtat 39
Query: 61 ttaacggcatggaatggacggaaccctaacgacgatg 97
||||||| |||||||||||||||||| ||||||
Sbjct: 38 ttaacggtgcaaaatggacggaaccctaacaacgatg 2
>50463_osa-miRf11248-akr:pmrd
Length = 107
Score = 97.6 bits (49), Expect = 1e-21
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 1 catcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtat 60
|||||||||||||||||||||||| || || |||||||| ||||| ||||||||||||||
Sbjct: 102 catcgccgttagggttccgtccatcccgcgtcgttaagtgctatatgatgaacagtgtat 43
Query: 61 ttaacggcatggaatggacggaaccctaacgacgatg 97
||||| || ||| ||| |||||||||||| |||||
Sbjct: 42 ttaacagcgtggggaggatggaaccctaacggcgatg 6
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 74 atggacggaaccctaacgacgatg 97
|||||||||||||||||| |||||
Sbjct: 79 atggacggaaccctaacggcgatg 102
>50488_osa-miRf11273-akr:pmrd
Length = 123
Score = 81.8 bits (41), Expect = 8e-17
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 1 catcgccgttagggttccgtccattccacgccgttaagttctataggatgaacagtgtat 60
||||||| |||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 14 catcgccattagggttccgttcactcagtaccgttaagttctataggatgaacagtgtat 73
Query: 61 ttaacggcatggaatggacggaaccctaa 89
|||||||| ||| |||||||||||||
Sbjct: 74 ttaacggcgcaaaatagacggaaccctaa 102
>50042_osa-miRf10827-akr:pmrd
Length = 122
Score = 75.8 bits (38), Expect = 5e-15
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 1 catcgccgttagggttccgtccattccacgccgttaag-ttctataggatgaacagtgta 59
|||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||
Sbjct: 110 catcgccgttagggttccattcattccacgatattaaaattctataggatgaacagtgta 51
Query: 60 tttaacggcatggaatggacggaaccctaacgacgatg 97
||||||||| |||||| ||||||||| |||||||
Sbjct: 50 tttaacggcgcaaaatggatagaaccctaatgacgatg 13
>50001_osa-miRf10786-akr:pmrd
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 catcgccgttagggttccgtccattcc 27
|||||||||||||||||||||||||||
Sbjct: 60 catcgccgttagggttccgtccattcc 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 71 ggaatggacggaaccctaacgacgatg 97
||||||||||||||||||||| |||||
Sbjct: 86 ggaatggacggaaccctaacggcgatg 60
