miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51315_osa-miRf12100-akr:pmrd
Length = 105
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 4 tgaaaagtgtgcgcgcggaaaatgagagaggtggattgcagtgccgaactgccccttttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaaagtgtgcgcgcggaaaatgagagaggtggattgcagtgccgaactgccccttttc 60
Query: 64 ccaacccttctccacctctctcgttttccacgcgcacgcttttta 108
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaacccttctccacctctctcgttttccacgcgcacgcttttta 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 74 tccacctctctcgttttccacgcgcacgctttt 106
|||||||||||| |||||| ||||||| |||||
Sbjct: 35 tccacctctctcattttccgcgcgcacactttt 3
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 6 aaaagtgtgcgcgcggaaaatgagagaggtgga 38
||||| ||||||| |||||| ||||||||||||
Sbjct: 103 aaaagcgtgcgcgtggaaaacgagagaggtgga 71
>51152_osa-miRf11937-akr:pmrd
Length = 112
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 gtttgaaaagtgtgcgcgcggaaaa 25
|||||||||| ||||||||||||||
Sbjct: 112 gtttgaaaagcgtgcgcgcggaaaa 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 ctcgttttccacgcgcacgctttt 106
|||||||||| |||||||||||||
Sbjct: 84 ctcgttttccgcgcgcacgctttt 107
>51151_osa-miRf11936-akr:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 gtttgaaaagtgtgcgcgcggaaaa 25
|||||||||| ||||||||||||||
Sbjct: 114 gtttgaaaagcgtgcgcgcggaaaa 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 ctcgttttccacgcgcacgctttt 106
|||||||||| |||||||||||||
Sbjct: 86 ctcgttttccgcgcgcacgctttt 109
