miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51314_osa-miRf12099-akr:pmrd
Length = 111
Score = 208 bits (105), Expect = 6e-55
Identities = 105/105 (100%)
Strand = Plus / Plus
Query: 1 tgaaaagtgtgcgcgcggaaaatgagagaggtggattgcagtgccgaactgccccttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgaaaagtgtgcgcgcggaaaatgagagaggtggattgcagtgccgaactgccccttttc 63
Query: 61 ccaacccttctccacctctctcgttttccacgcgcacgcttttta 105
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ccaacccttctccacctctctcgttttccacgcgcacgcttttta 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 71 tccacctctctcgttttccacgcgcacgctttt 103
|||||||||||| |||||| ||||||| |||||
Sbjct: 38 tccacctctctcattttccgcgcgcacactttt 6
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 aaaagtgtgcgcgcggaaaatgagagaggtgga 35
||||| ||||||| |||||| ||||||||||||
Sbjct: 106 aaaagcgtgcgcgtggaaaacgagagaggtgga 74
>51152_osa-miRf11937-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 ctcgttttccacgcgcacgctttt 103
|||||||||| |||||||||||||
Sbjct: 84 ctcgttttccgcgcgcacgctttt 107
>51151_osa-miRf11936-akr:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 ctcgttttccacgcgcacgctttt 103
|||||||||| |||||||||||||
Sbjct: 86 ctcgttttccgcgcgcacgctttt 109
