miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51549_psi-miR172:pmrd
Length = 68
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 217 tatttggggtgagaatcctgatgatgctgcac 248
||||||||||||||||||||||||||||||||
Sbjct: 37 tatttggggtgagaatcctgatgatgctgcac 68
>55047_zma-miR172n:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 60 gagaatcctgatgatgctgca 80
>54641_sof-miR172a:pmrd
Length = 300
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 279 gagaatcctgatgatgctgca 299
>51706_ptc-miR172i:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 96 gagaatcctgatgatgctgca 116
>48913_osa-miR172p:pmrd
Length = 318
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 297 gagaatcctgatgatgctgca 317
>48911_osa-miR172n:pmrd
Length = 62
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 41 gagaatcctgatgatgctgca 61
>48910_osa-miR172m:pmrd
Length = 297
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 276 gagaatcctgatgatgctgca 296
>48667_hvv-miR172d:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 251 gagaatcctgatgatgctgca 271
>48666_hvv-miR172c:pmrd
Length = 137
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 100 gagaatcctgatgatgctgca 120
>48665_hvv-miR172b:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 69 gagaatcctgatgatgctgca 89
>48664_hvv-miR172a:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 234 gagaatcctgatgatgctgca 254
>48314_bdi-miR172d:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 227 gagaatcctgatgatgctgca 247
|||||||||||||||||||||
Sbjct: 71 gagaatcctgatgatgctgca 91
>55046_zma-miR172m:pmrd
Length = 455
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
>54755_tca-miR172:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
>54684_tae-miR172b:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
>54683_tae-miR172a:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
>52946_ptc-miRf11124-akr:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 224 ggtgagaatcctgatgatgctgca 247
|||||||||| |||||||||||||
Sbjct: 100 ggtgagaatcttgatgatgctgca 123
>51947_ptc-miRf10125-akr:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 224 ggtgagaatcctgatgatgctgca 247
|||||||||| |||||||||||||
Sbjct: 99 ggtgagaatcttgatgatgctgca 122
>51700_ptc-miR172c:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 224 ggtgagaatcctgatgatgctgca 247
|||||||||| |||||||||||||
Sbjct: 95 ggtgagaatcttgatgatgctgca 118
>51698_ptc-miR172a:pmrd
Length = 129
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 224 ggtgagaatcctgatgatgctgca 247
|||||||||| |||||||||||||
Sbjct: 96 ggtgagaatcttgatgatgctgca 119
>48912_osa-miR172o:pmrd
Length = 53
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
>46989_ath-miR172m:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 228 agaatcctgatgatgctgca 247
||||||||||||||||||||
Sbjct: 1 agaatcctgatgatgctgca 20
