miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51414_ppt-miR533a:pmrd
Length = 102
Score = 202 bits (102), Expect = 4e-53
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 1 atggggagctggccaggctgtgagggacggagcagagttggcttgtggctccttgtggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggggagctggccaggctgtgagggacggagcagagttggcttgtggctccttgtggcc 60
Query: 61 ccctccagcagcttcctcctcacagtctgcacagctctccgt 102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccctccagcagcttcctcctcacagtctgcacagctctccgt 102
>51416_ppt-miR533d:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 ctcacagtctgcacagctctc 99
|||||||||||||||||||||
Sbjct: 92 ctcacagtctgcacagctctc 112
>51415_ppt-miR533c:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 ctcacagtctgcacagctctc 99
|||||||||||||||||||||
Sbjct: 125 ctcacagtctgcacagctctc 145
>51417_ppt-miR533e:pmrd
Length = 153
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 gagctggccaggctgtgagggacggagc 33
||||||||||| |||||||||| |||||
Sbjct: 34 gagctggccagactgtgagggatggagc 61
