miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51572_pta-miR946a:pmrd
Length = 172
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 cagagtgtatggatgtggatagagaagggttagtaaacggtagaaaacccatttattgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagagtgtatggatgtggatagagaagggttagtaaacggtagaaaacccatttattgta 60
Query: 61 tgtcattggctgttcgagattaagcagctgtaattcgatggccatactcattaaatgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtcattggctgttcgagattaagcagctgtaattcgatggccatactcattaaatgggt 120
Query: 121 tggctgtttgctctgtaccagcccttctcctatccacaattgtactagtttg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggctgtttgctctgtaccagcccttctcctatccacaattgtactagtttg 172
>51574_pta-miR946b:pmrd
Length = 261
Score = 89.7 bits (45), Expect = 6e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 88 ctgtaattcgatggccatactcattaaatgggttggctgtttgctctgtaccagcccttc 147
||||| || ||||||||| ||||||||||||||| ||||| ||| | |||||||||||
Sbjct: 177 ctgtattttgatggccatgctcattaaatgggttacctgttagctattcaccagcccttc 236
Query: 148 tcctatccacaattgtactagtttg 172
|||||||||||| ||||||||||||
Sbjct: 237 tcctatccacaactgtactagtttg 261
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 1 cagagtgtatggatgtggatagagaagggttagtaaacggtagaaaacccattta 55
||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||
Sbjct: 1 cagagtgtatggatgtggatatggaagggttagtaaacagtacaaaacccattta 55
