miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52678_ptc-miRf10856-akr:pmrd
          Length = 135

 Score =  268 bits (135), Expect = 1e-72
 Identities = 135/135 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgatgcgtgagcatcagtgcaatgcctgtggtctactagccattggatttgaaattagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgatgcgtgagcatcagtgcaatgcctgtggtctactagccattggatttgaaattagt 60

                                                                       
Query: 61  gggtctccttttactatttatttaatccaattacccaaatagccataggctttgtgctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gggtctccttttactatttatttaatccaattacccaaatagccataggctttgtgctga 120

                          
Query: 121 tgttcaaagcatcgg 135
           |||||||||||||||
Sbjct: 121 tgttcaaagcatcgg 135




>52679_ptc-miRf10857-akr:pmrd
          Length = 129

 Score =  256 bits (129), Expect = 4e-69
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                       
Query: 4   atgcgtgagcatcagtgcaatgcctgtggtctactagccattggatttgaaattagtggg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgcgtgagcatcagtgcaatgcctgtggtctactagccattggatttgaaattagtggg 60

                                                                       
Query: 64  tctccttttactatttatttaatccaattacccaaatagccataggctttgtgctgatgt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctccttttactatttatttaatccaattacccaaatagccataggctttgtgctgatgt 120

                    
Query: 124 tcaaagcat 132
           |||||||||
Sbjct: 121 tcaaagcat 129