miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51825_ptc-miRf10003-akr:pmrd
Length = 119
Score = 236 bits (119), Expect = 3e-63
Identities = 119/119 (100%)
Strand = Plus / Plus
Query: 1 tgaaatccaagtggacttcccttacaatctactctttcagtttcacagaagatccagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaaatccaagtggacttcccttacaatctactctttcagtttcacagaagatccagatt 60
Query: 61 agattttaaggcaaacaaattgatagagcagattgtaagggaagcccacatggatttca 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agattttaaggcaaacaaattgatagagcagattgtaagggaagcccacatggatttca 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 85 agagcagattgtaagggaagcccacatggatttca 119
|||| ||||||||||||||| |||| |||||||||
Sbjct: 35 agagtagattgtaagggaagtccacttggatttca 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 tgaaatccaagtggacttcccttacaatctactct 35
||||||||| |||| ||||||||||||||| ||||
Sbjct: 119 tgaaatccatgtgggcttcccttacaatctgctct 85
>53629_ptc-miRf11807-akr:pmrd
Length = 99
Score = 196 bits (99), Expect = 3e-51
Identities = 99/99 (100%)
Strand = Plus / Minus
Query: 11 gtggacttcccttacaatctactctttcagtttcacagaagatccagattagattttaag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gtggacttcccttacaatctactctttcagtttcacagaagatccagattagattttaag 40
Query: 71 gcaaacaaattgatagagcagattgtaagggaagcccac 109
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 gcaaacaaattgatagagcagattgtaagggaagcccac 1
