miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccg 65
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||
Sbjct: 73 gttattaaacccggcccggcccggcgggtcgacccgggacccggtggctggaccggttcg 14
Query: 66 ggtttaataaaag 78
|||||||||||||
Sbjct: 13 ggtttaataaaag 1
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 101 bits (51), Expect = 8e-23
Identities = 73/81 (90%), Gaps = 7/81 (8%)
Strand = Plus / Minus
Query: 1 gcactgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccg 60
||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 74 gcactgttattaaacccggcccggcctggcgggtcgaccc-------ggtggctggaccg 22
Query: 61 gtccgggtttaataaaagacc 81
|||||||||||||||||||||
Sbjct: 21 gtccgggtttaataaaagacc 1
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 95.6 bits (48), Expect = 5e-21
Identities = 70/75 (93%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtc 63
||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||||||
Sbjct: 1 ctgttattaaacccggcccggcccggcgggtcgacccg--acc-ggtggctggaccggtc 57
Query: 64 cgggtttaataaaag 78
|||||||||||||||
Sbjct: 58 cgggtttaataaaag 72
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 93.7 bits (47), Expect = 2e-20
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtc 63
|||||||||||||||| |||||| || |||||||||| |||| ||||||| ||||||||
Sbjct: 75 ctgttattaaacccggtccggcccggcgggtcgacccaagacccggtggctagaccggtc 16
Query: 64 cgggtttaataaaag 78
|||||||||||||||
Sbjct: 15 cgggtttaataaaag 1
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 91.7 bits (46), Expect = 7e-20
Identities = 74/84 (88%), Gaps = 7/84 (8%)
Strand = Plus / Minus
Query: 1 gcactgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccg 60
||||||||||||||| |||||||||| || |||||||||||| |||||||||||
Sbjct: 77 gcactgttattaaactcggcccggcccggcgggtcgacccgg-------tggctggaccg 25
Query: 61 gtccgggtttaataaaagaccggc 84
||||||||||||||||||||||||
Sbjct: 24 gtccgggtttaataaaagaccggc 1
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccg 65
|||||||||||| |||||||| | || |||||||||||| ||||||||||||||||||
Sbjct: 76 gttattaaaccctgcccggcccgaccggccgacccgggacccggtggctggaccggtccg 17
Query: 66 ggtttaataaaa 77
||||||||||||
Sbjct: 16 ggtttaataaaa 5
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 87.7 bits (44), Expect = 1e-18
Identities = 76/88 (86%), Gaps = 9/88 (10%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctggt---------ggctgg 56
||||||||||||||||||||| || |||||||||||||||| ||| ||||||
Sbjct: 88 gttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgg 29
Query: 57 accggtccgggtttaataaaagaccggc 84
||||||||||||||||||||||||||||
Sbjct: 28 accggtccgggtttaataaaagaccggc 1
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 87.7 bits (44), Expect = 1e-18
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 10 ttaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccgggtt 69
||||||| || |||||| || |||||||||||||||| ||||||||||||||||||||||
Sbjct: 72 ttaaacctggaccggcccggcgggtcgacccgggacccggtggctggaccggtccgggtt 13
Query: 70 taataaaa 77
|| |||||
Sbjct: 12 tactaaaa 5
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 83.8 bits (42), Expect = 2e-17
Identities = 64/69 (92%), Gaps = 3/69 (4%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccgg 66
|||||||||||||||||||| || ||||||||||| ||| |||||||||||||||||||
Sbjct: 66 ttattaaacccggcccggcccggcgggtcgacccg--acc-ggtggctggaccggtccgg 10
Query: 67 gtttaataa 75
|||||||||
Sbjct: 9 gtttaataa 1
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 83.8 bits (42), Expect = 2e-17
Identities = 77/90 (85%), Gaps = 9/90 (10%)
Strand = Plus / Minus
Query: 1 gcactgttattaaacccggcccggcctggtgggtcgacccgg---------gacctggtg 51
|||||||||||||||||||||||||| || |||||||||||| |||| ||||
Sbjct: 90 gcactgttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtg 31
Query: 52 gctggaccggtccgggtttaataaaagacc 81
||||||||||||||||||||| ||||||||
Sbjct: 30 gctggaccggtccgggtttaacaaaagacc 1
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/76 (88%), Gaps = 7/76 (9%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccg 65
||||||||||||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 69 gttattaaacccggcccggcccggcgggtcgacccgg-------tggctggaccggtccg 17
Query: 66 ggtttaataaaagacc 81
||||||||||||||||
Sbjct: 16 ggtttaataaaagacc 1
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 79.8 bits (40), Expect = 3e-16
Identities = 72/84 (85%), Gaps = 9/84 (10%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggt---------ggctgga 57
|||||||||||||||||||| || |||||||||||||||| ||| |||||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 58 ccggtccgggtttaataaaagacc 81
||||||||||||||||||||||||
Sbjct: 24 ccggtccgggtttaataaaagacc 1
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 79.8 bits (40), Expect = 3e-16
Identities = 71/82 (86%), Gaps = 7/82 (8%)
Strand = Plus / Minus
Query: 1 gcactgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccg 60
||||||||||||||| |||||||| | || |||||||||||| |||||||||||
Sbjct: 75 gcactgttattaaactcggcccggtccggcgggtcgacccgg-------tggctggaccg 23
Query: 61 gtccgggtttaataaaagaccg 82
||||||||||||||||||||||
Sbjct: 22 gtccgggtttaataaaagaccg 1
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 75/88 (85%), Gaps = 9/88 (10%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctg---------gtggctgg 56
||||||||||||| ||||||| || |||||||||||||||| | ||||||||
Sbjct: 88 gttattaaacccgacccggcccggcgggtcgacccgggacccgatcgacccggtggctgg 29
Query: 57 accggtccgggtttaataaaagaccggc 84
||||||||||||||||||||||||||||
Sbjct: 28 accggtccgggtttaataaaagaccggc 1
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 79.8 bits (40), Expect = 3e-16
Identities = 75/88 (85%), Gaps = 9/88 (10%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacctggt---------ggctgg 56
|||||||||||||| |||||| || |||||||||||||||| ||| ||||||
Sbjct: 89 gttattaaacccggtccggcccggcgggtcgacccgggacccggtcgacccggtggctgg 30
Query: 57 accggtccgggtttaataaaagaccggc 84
||||||||||||||||||||||||||||
Sbjct: 29 accggtccgggtttaataaaagaccggc 2
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 79.8 bits (40), Expect = 3e-16
Identities = 72/84 (85%), Gaps = 9/84 (10%)
Strand = Plus / Plus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccggg---------acctggtggct 54
|||||||||||||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 1 ctgttattaaacccggcccggcctggtgggtcgaatcgggacccggtcaacccggtggct 60
Query: 55 ggaccggtccgggtttaataaaag 78
||||||||||||||||||||||||
Sbjct: 61 ggaccggtccgggtttaataaaag 84
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 77.8 bits (39), Expect = 1e-15
Identities = 69/80 (86%), Gaps = 8/80 (10%)
Strand = Plus / Minus
Query: 1 gcactgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccg 60
|||||||||||||||||||||||||| || ||| ||||| |||||||||||||
Sbjct: 73 gcactgttattaaacccggcccggcccgg--------cccaggacccggtggctggaccg 22
Query: 61 gtccgggtttaataaaagac 80
||||||||||||||||||||
Sbjct: 21 gtccgggtttaataaaagac 2
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagaccggc 84
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 42 gacccggtggctggaccggtccgggtttaataaaagaccggc 1
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagaccggc 84
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 37 gacccggtggctggaccggtccgggtttaataaaagaccggc 78
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagaccggc 84
|||| |||||||||||||||||||||||||||||||||||||
Sbjct: 47 gacccggtggctggaccggtccgggtttaataaaagaccggc 88
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagacc 81
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 39 gacccggtggctggaccggtccgggtttaataaaagacc 1
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagacc 81
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 40 gacccggtggctggaccggtccgggtttaataaaagacc 78
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 69.9 bits (35), Expect = 3e-13
Identities = 60/69 (86%), Gaps = 7/69 (10%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccgg 66
|||||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgacccgg-------tggctggaccggtccgg 10
Query: 67 gtttaataa 75
|||||||||
Sbjct: 9 gtttaataa 1
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 69.9 bits (35), Expect = 3e-13
Identities = 60/69 (86%), Gaps = 7/69 (10%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccgg 66
|||||||||||||||||||| || |||||||||||| |||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgacccgg-------tggctggaccggtccgg 10
Query: 67 gtttaataa 75
|||||||||
Sbjct: 9 gtttaataa 1
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccgggacc 46
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1 ctgttattaaacccggcccggcccggcgggtcgacccgggacc 43
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/78 (84%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgg---------gacctggtggctgga 57
|||||||||||||||||||| || |||||||||||| |||| ||||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/78 (84%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgg---------gacctggtggctgga 57
|||||||||||||||||||| || |||||||||||| |||| ||||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/78 (84%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgg---------gacctggtggctgga 57
|||||||||||||||||||| || |||||||||||| |||| ||||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 66/78 (84%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgg---------gacctggtggctgga 57
|||||||||||||||||||| || |||||||||||| |||| ||||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 65.9 bits (33), Expect = 4e-12
Identities = 74/89 (83%), Gaps = 9/89 (10%)
Strand = Plus / Minus
Query: 2 cactgttattaaacccggcccggcctggtgggtcgacccgggacctggt---------gg 52
|||||||||||||||||| | |||| || |||||||||||||||| ||| ||
Sbjct: 89 cactgttattaaacccggtctggcccggcgggtcgacccgggacccggtcgacccggtgg 30
Query: 53 ctggaccggtccgggtttaataaaagacc 81
|||||||||||||||||||| ||||||||
Sbjct: 29 ctggaccggtccgggtttaacaaaagacc 1
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 6 gttattaaacccggcccggcctggtgggtcgacccgggacc 46
||||||||||||||||||||| || ||||||||||||||||
Sbjct: 85 gttattaaacccggcccggcccggcgggtcgacccgggacc 45
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 65.9 bits (33), Expect = 4e-12
Identities = 64/75 (85%), Gaps = 7/75 (9%)
Strand = Plus / Minus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtc 63
||||||||||||||||||||||| || ||||||| |||| ||||| ||||||||
Sbjct: 68 ctgttattaaacccggcccggcccggcgggtcgatccgg-------tggctagaccggtc 16
Query: 64 cgggtttaataaaag 78
|||||||||||||||
Sbjct: 15 cgggtttaataaaag 1
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 65.9 bits (33), Expect = 4e-12
Identities = 64/75 (85%), Gaps = 7/75 (9%)
Strand = Plus / Plus
Query: 4 ctgttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtc 63
||||||||||||||||||||||| || ||||||||||| ||| ||||||||||
Sbjct: 1 ctgttattaaacccggcccggcccggcaggtcgacccgg-------tggttggaccggtc 53
Query: 64 cgggtttaataaaag 78
|||||||||||||||
Sbjct: 54 cgggtttaataaaag 68
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 63.9 bits (32), Expect = 2e-11
Identities = 70/84 (83%), Gaps = 9/84 (10%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggt---------ggctgga 57
||||||||||||||||| || | |||||||||||||||||||| |||||||
Sbjct: 84 ttattaaacccggcccgacccagcgggtcgacccgggacctggtcgatccggtggctgga 25
Query: 58 ccggtccgggtttaataaaagacc 81
|||||||||||||| |||||||||
Sbjct: 24 ccggtccgggtttactaaaagacc 1
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 63.9 bits (32), Expect = 2e-11
Identities = 57/66 (86%), Gaps = 7/66 (10%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctggtggctggaccggtccgg 66
|||||||||||||||||||| || |||||||||| |||||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgaccc-------ggtggctggaccggtccgg 10
Query: 67 gtttaa 72
||||||
Sbjct: 9 gtttaa 4
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 49 gtggctggaccggtccgggtttaataaaagac 80
||||||||||||||||||||||||||||||||
Sbjct: 36 gtggctggaccggtccgggtttaataaaagac 5
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggtttaataaaag 78
|||| |||||||||||||||||||||||||||||||
Sbjct: 33 gacccggtggctggaccggtccgggtttaataaaag 68
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 21 ccggcctggtgggtcgacccgggacctggtggctggaccggtccgggtttaataaaagac 80
|||||||||||||| |||||| ||| ||||||||||||||| || ||||| |||||||
Sbjct: 5 ccggcctggtgggttgacccgagactcggtggctggaccggttcgagtttattaaaagat 64
Query: 81 cggc 84
||||
Sbjct: 65 cggc 68
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 61.9 bits (31), Expect = 7e-11
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 48 ggtggctggaccggtccgggtttaataaaag 78
|||||||||||||||||||||||||||||||
Sbjct: 31 ggtggctggaccggtccgggtttaataaaag 1
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 65/78 (83%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacctg---------gtggctgga 57
||||||||||||| |||||| || |||||||||||||||| | |||||||||
Sbjct: 78 ttattaaacccggtccggcccggcgggtcgacccgggacccgatcgacccagtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggtttaataaa 76
|||| |||||||||||||||||||||||||||||
Sbjct: 42 gacccggtggctggaccggtccgggtttaataaa 9
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 3e-10
Identities = 65/78 (83%), Gaps = 9/78 (11%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacct---------ggtggctgga 57
||||||||| |||||||||| || |||||||||||||||| ||||||||||
Sbjct: 78 ttattaaactcggcccggcccggcgggtcgacccgggacccagtcgacccggtggctgga 19
Query: 58 ccggtccgggtttaataa 75
||||||||||||||||||
Sbjct: 18 ccggtccgggtttaataa 1
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 42 ggacctggtggctggaccggtccgggtttaataa 75
||||| ||||||||||||||||||||||||||||
Sbjct: 34 ggaccgggtggctggaccggtccgggtttaataa 1
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcc 26
||||||||||||||||||||
Sbjct: 56 ttattaaacccggcccggcc 37
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggtttaataaaagaccggc 84
|||| |||||||||||||||| ||||||| ||||||||||||
Sbjct: 106 gacccggtggctggaccggtctgggtttattaaaagaccggc 65
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggtttaataa 75
|||| ||||||||||||||||||||||||||||
Sbjct: 33 gacccggtggctggaccggtccgggtttaataa 1
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 48 ggtggctggaccggtccgggtttaataaaagaccggc 84
|||||||||||||||| ||||||||||||||| ||||
Sbjct: 94 ggtggctggaccggtctgggtttaataaaagatcggc 58
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacc 46
|||||||||||||||||||| || ||||| ||||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcaacccgggacc 39
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggac 45
|||||||||||||||| ||| || |||||||||||||||
Sbjct: 78 ttattaaacccggcccagcccggcgggtcgacccgggac 40
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 43 gacctggtggctggaccggtccgggttta 71
|||| ||||||||||||||||||||||||
Sbjct: 39 gacccggtggctggaccggtccgggttta 11
Score = 50.1 bits (25), Expect = 2e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 10 ttaaacccggcccggcctggtgggtcgacccgggacc 46
|||||||||| |||||| || ||||||||||||||||
Sbjct: 81 ttaaacccggaccggcccggcgggtcgacccgggacc 45
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggtttaataa 75
|||| ||| ||||||||||||||||||||||||
Sbjct: 46 gacccggtagctggaccggtccgggtttaataa 78
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 49 gtggctggaccggtccgggtttaataaaagaccggc 84
|||||||||||||| ||||||| ||||||||||||
Sbjct: 61 gtggctggaccggttcgggtttgttaaaagaccggc 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacc 46
||||||||||||| ||||| || |||||||||||||||
Sbjct: 10 ttattaaacccggatcggcccggcaggtcgacccgggacc 49
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 7 ttattaaacccggcccggcctggtgggtcgacccgggacc 46
||||||||||||| |||||| || |||||||| |||||||
Sbjct: 1 ttattaaacccggaccggcccggcgggtcgactcgggacc 40
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgg 66
||||||||||||||||||||||||
Sbjct: 23 gacctggtggctggaccggtccgg 46
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 56 gaccggtccgggtttaataaaag 78
|||||||||||||||||||||||
Sbjct: 23 gaccggtccgggtttaataaaag 1
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 4 ctgttattaaacccggcccggcc 26
|||||||||||||||||||||||
Sbjct: 71 ctgttattaaacccggcccggcc 49
>52447_ptc-miRf10625-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ccggcctggtgggtcgacccgggacctgg 49
|||||| |||||||||||| |||||||||
Sbjct: 7 ccggcccggtgggtcgacctgggacctgg 35
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 48 ggtggctggaccggtccgggt 68
|||||||||||||||||||||
Sbjct: 18 ggtggctggaccggtccgggt 38
>52394_ptc-miRf10572-akr:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 48 ggtggctggaccggtccgggtttaataaaagaccgg 83
||||||| ||||||||| ||||| |||||||||||
Sbjct: 25 ggtggctagaccggtcctggtttgttaaaagaccgg 60
>52275_ptc-miRf10453-akr:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 gggtcgacccgggacctggt 50
||||||||||||||||||||
Sbjct: 1 gggtcgacccgggacctggt 20
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 43 gacctggtggctggaccggtccgggttt 70
|||| |||||||||||| ||||||||||
Sbjct: 15 gacccggtggctggaccagtccgggttt 42
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 50 tggctggaccggtccgggtttaataaaagac 80
|||||||||||||||| |||| ||||||||
Sbjct: 31 tggctggaccggtccgagtttgttaaaagac 1
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 12 aaacccggcccggcctggtgggtcgacccgggacc 46
||||||| |||||| || ||||||||||||||||
Sbjct: 136 aaacccgaaccggcccggcgggtcgacccgggacc 102
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 gtggctggaccggtccgggtttaataa 75
||||||||| |||| ||||||||||||
Sbjct: 52 gtggctggatcggttcgggtttaataa 78
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 49 gtggctggaccggtccgggtttaataa 75
||||||||| |||| ||||||||||||
Sbjct: 52 gtggctggatcggttcgggtttaataa 78
>52345_ptc-miRf10523-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 0.001
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 30 tgggtcgacccgggacctggtggctggaccggtccgggtttaataaaagaccggc 84
|||||| |||||| ||| ||| ||||||||| | ||||||| |||||||||||
Sbjct: 116 tgggtcaacccggaacccggtagctggaccgattcgggtttgccaaaagaccggc 62
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 55 ggaccggtccgggtttaataaaa 77
||||||||||||||||| |||||
Sbjct: 59 ggaccggtccgggtttactaaaa 81
