miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53514_ptc-miRf11692-akr:pmrd
Length = 105
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 64
Query: 61 tgacgtagttttgctgccaatttctgaatcggtagcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgacgtagttttgctgccaatttctgaatcggtagcg 101
>52211_ptc-miRf10389-akr:pmrd
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 60
Query: 61 tgacgtagttttgctgccaatttctgaatcggtagcg 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacgtagttttgctgccaatttctgaatcggtagcg 97
>54322_ptc-miRf12500-akr:pmrd
Length = 100
Score = 67.9 bits (34), Expect = 1e-12
Identities = 74/85 (87%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 8 gatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagtgacgta 67
||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||| ||| |
Sbjct: 9 gatttctgaatcggcagcgacacaattttta-tgtcgatttctgaatcgacagcgacaaa 67
Query: 68 --gttttgctgccaatttctgaatc 90
|||| |||||| |||||||||||
Sbjct: 68 gtgtttggctgcccatttctgaatc 92
>52401_ptc-miRf10579-akr:pmrd
Length = 101
Score = 63.9 bits (32), Expect = 2e-11
Identities = 82/96 (85%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 4 tgccgatttctgaattggcagtgacacaatttttat-tgtcgatttatgaatcgacagtg 62
||||||||||||||| ||||||| |||| ||||| || |||||| |||||||||||
Sbjct: 5 tgccgatttctgaatcggcagtggcacagtttttggctgccgatttttgaatcgacagct 64
Query: 63 acgtagtttt-gctgccaatttctgaatcggtagcg 97
| | |||||| |||||||||||||||||||| ||||
Sbjct: 65 atgcagtttttgctgccaatttctgaatcggcagcg 100
>53816_ptc-miRf11994-akr:pmrd
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttta-ttgtcgatttatgaatcgaca 59
||||| |||||||||||| ||||| ||||||||| || || |||||| ||||||| ||
Sbjct: 2 tgctgtcgatttctgaatcggcagcaacacaatttctagctgccgatttctgaatcggca 61
Query: 60 gtgacgtagttttgctgccaatttctgaatcg 91
|||| | ||||| |||||| |||||| |||||
Sbjct: 62 gtgaggcagtttggctgccgatttctaaatcg 93
>53815_ptc-miRf11993-akr:pmrd
Length = 100
Score = 56.0 bits (28), Expect = 5e-09
Identities = 77/92 (83%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttta-ttgtcgatttatgaatcgaca 59
||||| |||||||||||| ||||| ||||||||| || || |||||| ||||||| ||
Sbjct: 2 tgctgtcgatttctgaatcggcagcaacacaatttctagctgccgatttctgaatcggca 61
Query: 60 gtgacgtagttttgctgccaatttctgaatcg 91
|||| | ||||| |||||| |||||| |||||
Sbjct: 62 gtgaggcagtttggctgccgatttctaaatcg 93
>52291_ptc-miRf10469-akr:pmrd
Length = 180
Score = 54.0 bits (27), Expect = 2e-08
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 6 ccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 60
||||||||||||| ||||| ||| || |||| || ||||||||||||||||||||
Sbjct: 83 ccgatttctgaatcggcagcgacgcagttttgat-gtcgatttatgaatcgacag 136
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 67 agttttgctgccaatttctgaatcg 91
|||||||||||||||||||||||||
Sbjct: 36 agttttgctgccaatttctgaatcg 60
>54139_ptc-miRf12317-akr:pmrd
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 3 ctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcg 56
|||||||||||||| | ||||| ||||||||||| ||| |||||||||||||
Sbjct: 11 ctgccgatttctgattcggcagcgacacaattttcgctgttgatttatgaatcg 64
>54138_ptc-miRf12316-akr:pmrd
Length = 75
Score = 52.0 bits (26), Expect = 7e-08
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 3 ctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcg 56
|||||||||||||| | ||||| ||||||||||| ||| |||||||||||||
Sbjct: 11 ctgccgatttctgattcggcagcgacacaattttcgctgttgatttatgaatcg 64
>53010_ptc-miRf11188-akr:pmrd
Length = 112
Score = 52.0 bits (26), Expect = 7e-08
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 40 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagcg 97
||||||||| ||||||| || ||| | || ||||||||| |||| |||||||||||||
Sbjct: 12 tgtcgatttctgaatcggcaatgatgcaggtttgctgccgatttttgaatcggtagcg 69
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaatttttattgtcg 44
|||||||||||| ||||| || || ||| || ||||||||||||
Sbjct: 44 tgctgccgatttttgaatcggtagcgacgcagtttttattgtcg 87
>53814_ptc-miRf11992-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttt 37
||||| |||||||||||| ||||| ||||||||||||
Sbjct: 4 tgctgtcgatttctgaatcggcagcgacacaattttt 40
>53813_ptc-miRf11991-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttt 37
||||| |||||||||||| ||||| ||||||||||||
Sbjct: 4 tgctgtcgatttctgaatcggcagcgacacaattttt 40
>52403_ptc-miRf10581-akr:pmrd
Length = 130
Score = 50.1 bits (25), Expect = 3e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 40 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagc 96
||||||||| | |||| |||| |||| |||| ||||||| |||||||||||| ||||
Sbjct: 68 tgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagc 124
>52402_ptc-miRf10580-akr:pmrd
Length = 130
Score = 50.1 bits (25), Expect = 3e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 40 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagc 96
||||||||| | |||| |||| |||| |||| ||||||| |||||||||||| ||||
Sbjct: 68 tgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagc 124
>52356_ptc-miRf10534-akr:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttt 37
||||| |||||||||||| ||||| ||||||||||||
Sbjct: 4 tgctgtcgatttctgaatcggcagcgacacaattttt 40
>52226_ptc-miRf10404-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattttt 37
|||||||||||||||||| ||||| |||||| |||||
Sbjct: 2 tgctgccgatttctgaatcggcagcgacacacttttt 38
>53818_ptc-miRf11996-akr:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattt-ttattgtcgatttatgaatcgaca 59
||||| |||||||||||| ||||| ||||||||| | | || |||||| ||||||| |
Sbjct: 5 tgctgtcgatttctgaatcggcagcaacacaatttctaactgccgatttctgaatcggta 64
Query: 60 gtgacgtagttttgctgccaatttctgaatcg 91
|||| | ||||| |||||| |||||| |||||
Sbjct: 65 gtgaggcagtttggctgccgatttctaaatcg 96
>53817_ptc-miRf11995-akr:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaattt-ttattgtcgatttatgaatcgaca 59
||||| |||||||||||| ||||| ||||||||| | | || |||||| ||||||| |
Sbjct: 5 tgctgtcgatttctgaatcggcagcaacacaatttctaactgccgatttctgaatcggta 64
Query: 60 gtgacgtagttttgctgccaatttctgaatcg 91
|||| | ||||| |||||| |||||| |||||
Sbjct: 65 gtgaggcagtttggctgccgatttctaaatcg 96
>52437_ptc-miRf10615-akr:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcg 56
||||| ||||||||||| |||| |||||||||||| |||| |||||| |||||||
Sbjct: 79 gctgctgatttctgaatcagcagcgacacaatttttcattgccgatttctgaatcg 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 71/86 (82%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 6 ccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcgacagtgac 64
||||||||||||| |||| |||| ||||||| |||| ||||| ||||| | ||| |||
Sbjct: 11 ccgatttctgaatcggcaacgacataatttttcattgctgatttctgaattggcagcgac 70
Query: 65 gtagttttgctgccaatttctgaatc 90
| ||||| ||||| |||||||||||
Sbjct: 71 gcagtttggctgctgatttctgaatc 96
>52436_ptc-miRf10614-akr:pmrd
Length = 147
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcg 56
||||| ||||||||||| |||| |||||||||||| |||| |||||| |||||||
Sbjct: 79 gctgctgatttctgaatcagcagcgacacaatttttcattgccgatttctgaatcg 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 71/86 (82%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 6 ccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcgacagtgac 64
||||||||||||| |||| |||| ||||||| |||| ||||| ||||| | ||| |||
Sbjct: 11 ccgatttctgaatcggcaacgacataatttttcattgctgatttctgaattggcagcgac 70
Query: 65 gtagttttgctgccaatttctgaatc 90
| ||||| ||||| |||||||||||
Sbjct: 71 gcagtttggctgctgatttctgaatc 96
>52292_ptc-miRf10470-akr:pmrd
Length = 71
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 gttttgctgccaatttctgaatcg 91
||||||||||||||||||||||||
Sbjct: 1 gttttgctgccaatttctgaatcg 24
>52027_ptc-miRf10205-akr:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 2 gctgccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcg 56
||||| ||||||||||| |||| |||||||||||| |||| |||||| |||||||
Sbjct: 68 gctgctgatttctgaatcagcagcgacacaatttttcattgccgatttctgaatcg 13
Score = 44.1 bits (22), Expect = 2e-05
Identities = 71/86 (82%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 6 ccgatttctgaattggcagtgacacaattttt-attgtcgatttatgaatcgacagtgac 64
||||||||||||| |||| |||| ||||||| |||| ||||| ||||| | ||| |||
Sbjct: 136 ccgatttctgaatcggcaacgacataatttttcattgctgatttctgaattggcagcgac 77
Query: 65 gtagttttgctgccaatttctgaatc 90
| ||||| ||||| |||||||||||
Sbjct: 76 gcagtttggctgctgatttctgaatc 51
>54342_ptc-miRf12520-akr:pmrd
Length = 180
Score = 46.1 bits (23), Expect = 5e-06
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagt 61
||||||||||||||||| |||| | | ||| |||| |||||||||| ||||||| |||
Sbjct: 5 gctgccgatttctgaatccgcagcggcgcaa-ttttgttgtcgatttctgaatcggcagc 63
Query: 62 gacgtagtttt--gctgccaatttctgaatcggtagcg 97
| | |||||| |||||| ||||||||||||| ||||
Sbjct: 64 ggcaaagtttttggctgccgatttctgaatcggcagcg 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 48/56 (85%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacaca-atttttattgtcgatttatgaatcg 56
||||||||||||||||| ||||| | | || ||||||||||| |||| |||||||
Sbjct: 77 gctgccgatttctgaatcggcagcgccgcagttttttattgtcaatttctgaatcg 132
>53192_ptc-miRf11370-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 5e-06
Identities = 81/98 (82%), Gaps = 3/98 (3%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagt 61
||||||||||||||||| |||| | | ||| |||| |||||||||| ||||||| |||
Sbjct: 5 gctgccgatttctgaatccgcagcggcgcaa-ttttgttgtcgatttctgaatcggcagc 63
Query: 62 gacgtagtttt--gctgccaatttctgaatcggtagcg 97
| | |||||| |||||| ||||||||||||| ||||
Sbjct: 64 ggcaaagtttttggctgccgatttctgaatcggcagcg 101
>53081_ptc-miRf11259-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 26 gacacaatttttattgtcgatttatgaatcgacag 60
||||||||||| |||| |||||| |||||||||||
Sbjct: 85 gacacaattttcattgccgatttttgaatcgacag 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 4 tgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagtga 63
||||||||| ||||| | ||| ||||||| ||| ||| ||||| ||||||||||| ||
Sbjct: 71 tgccgatttttgaatcgacagcgacacaaatttcgttgctgatttctgaatcgacagcga 12
Query: 64 cgtagttt 71
| ||||||
Sbjct: 11 catagttt 4
>53080_ptc-miRf11258-akr:pmrd
Length = 131
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 26 gacacaatttttattgtcgatttatgaatcgacag 60
||||||||||| |||| |||||| |||||||||||
Sbjct: 89 gacacaattttcattgccgatttttgaatcgacag 55
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 4 tgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagtga 63
||||||||| ||||| | ||| ||||||| ||| ||| ||||| ||||||||||| ||
Sbjct: 75 tgccgatttttgaatcgacagcgacacaaatttcgttgctgatttctgaatcgacagcga 16
Query: 64 cgtagttt 71
| ||||||
Sbjct: 15 catagttt 8
>53078_ptc-miRf11256-akr:pmrd
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 gctgccaatttctgaatcggtag 95
|||||||||||||||||||||||
Sbjct: 74 gctgccaatttctgaatcggtag 96
>52025_ptc-miRf10203-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 26 gacacaatttttattgtcgatttatgaatcgacag 60
||||||||||| |||| |||||| |||||||||||
Sbjct: 85 gacacaattttcattgccgatttttgaatcgacag 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 4 tgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagtga 63
||||||||| ||||| | ||| ||||||| ||| ||| ||||| ||||||||||| ||
Sbjct: 71 tgccgatttttgaatcgacagcgacacaaatttcgttgctgatttctgaatcgacagcga 12
Query: 64 cgtagttt 71
| ||||||
Sbjct: 11 catagttt 4
>52024_ptc-miRf10202-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 26 gacacaatttttattgtcgatttatgaatcgacag 60
||||||||||| |||| |||||| |||||||||||
Sbjct: 85 gacacaattttcattgccgatttttgaatcgacag 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 4 tgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagtga 63
||||||||| ||||| | ||| ||||||| ||| ||| ||||| ||||||||||| ||
Sbjct: 71 tgccgatttttgaatcgacagcgacacaaatttcgttgctgatttctgaatcgacagcga 12
Query: 64 cgtagttt 71
| ||||||
Sbjct: 11 catagttt 4
>53723_ptc-miRf11901-akr:pmrd
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtga 27
||||||||||||||||| ||||||||
Sbjct: 11 gctgccgatttctgaatcggcagtga 36
>52433_ptc-miRf10611-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 ctgccgatttctgaattggcag 24
||||||||||||||||||||||
Sbjct: 79 ctgccgatttctgaattggcag 100
>52432_ptc-miRf10610-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 ctgccgatttctgaattggcag 24
||||||||||||||||||||||
Sbjct: 79 ctgccgatttctgaattggcag 100
>52587_ptc-miRf10765-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tgccgatttctgaattggcag 24
|||||||||||||||||||||
Sbjct: 42 tgccgatttctgaattggcag 62
>51957_ptc-miRf10135-akr:pmrd
Length = 277
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 73 gctgccaatttctgaatcggtagcg 97
|||||||||||||| ||||||||||
Sbjct: 208 gctgccaatttctggatcggtagcg 232
>53569_ptc-miRf11747-akr:pmrd
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaattttt 37
||||||||||||| ||| ||||| ||||||| ||||
Sbjct: 8 gctgccgatttctaaatcggcagcgacacaactttt 43
>53476_ptc-miRf11654-akr:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 66 tagttttgctgccaatttctgaatcggtagcg 97
|||||| |||||| ||||||||||||| ||||
Sbjct: 72 tagtttggctgccgatttctgaatcggcagcg 103
>53324_ptc-miRf11502-akr:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 77/96 (80%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacagt 61
||||||||||| | ||| |||| |||| || ||||| || ||||| ||||| | |||
Sbjct: 46 gctgccgatttataaatcggcattgacgcagtttttgctgatgatttctgaataggcagc 105
Query: 62 gacgtagttttgctgccaatttctgaatcggtagcg 97
||| |||||||||| | ||||||||||||| ||||
Sbjct: 106 gacacagttttgctgtcgatttctgaatcggcagcg 141
>53074_ptc-miRf11252-akr:pmrd
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 gctgccgatttctgaattggcagt 25
||||||||||||||||| ||||||
Sbjct: 9 gctgccgatttctgaatcggcagt 32
>52970_ptc-miRf11148-akr:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 69 ttttgctgccaatttctgaatcgg 92
||||||||| ||||||||||||||
Sbjct: 5 ttttgctgctaatttctgaatcgg 28
>52963_ptc-miRf11141-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 1 tgctgccgatttctgaattggcagtgacacaatttttattgtcgatttatgaatcgacag 60
||||||||||||||| || ||||| ||| || |||| ||||||||| || |||| |||
Sbjct: 6 tgctgccgatttctgcatcggcagcgacgcagttttcgctgtcgatttctgcatcggcag 65
Query: 61 tgacgtagtttt 72
|||| ||||||
Sbjct: 66 cgacgcagtttt 77
>52380_ptc-miRf10558-akr:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 3e-04
Identities = 39/44 (88%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 5 gccgatttctgaattggcagtgacacaatt-tttattgtcgatt 47
|||||||||||||| ||||| |||||| || |||| ||||||||
Sbjct: 6 gccgatttctgaatcggcagcgacacagttctttactgtcgatt 49
>52192_ptc-miRf10370-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 66 tagttttgctgccaatttctgaatcggtagcg 97
|||||| |||||| ||||||||||||| ||||
Sbjct: 71 tagtttggctgccgatttctgaatcggcagcg 102
