miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 151 bits (76), Expect = 1e-37
Identities = 107/116 (92%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 13 cactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgaccaa 72
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 73 ctttcctagtggcaaataaacacaggaaagtttggaaagtggtttcccggaaagtg 128
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 151 bits (76), Expect = 1e-37
Identities = 107/116 (92%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||
Sbjct: 13 cactttcctggaaaccaagccaaatttttctttgactggaaagtgttttccgttgaccaa 72
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 73 cttttctaatggcaaacaaacacaggaaagtttggaaagtggtttcttggaaagtg 128
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 143 bits (72), Expect = 3e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||||
Sbjct: 7 cactttcctggaaaccaagccaaatttttctttgactgaaaagtgttttccgttgaccaa 66
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||| ||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 67 cttttctagtggcaaataaacacaggaaagtttggaaagtggtttcccggaaagtg 122
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 143 bits (72), Expect = 3e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 13 cactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgaccaa 72
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 73 cttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaagtg 128
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 143 bits (72), Expect = 3e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 13 cactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgaccaa 72
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 73 cttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaagtg 128
>52389_ptc-miRf10567-akr:pmrd
Length = 140
Score = 143 bits (72), Expect = 3e-35
Identities = 106/116 (91%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 13 cactttcctggaaaccaagccaaattttcctttgactggaaagtgttttccgttgaccaa 72
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||||||||||||||||| | |||||||||||||||||||||| ||||||||
Sbjct: 73 cttttctaatggcaaacaaacaaaagaaagtttggaaagtggtttcctggaaagtg 128
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 141 bits (71), Expect = 1e-34
Identities = 105/115 (91%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgtttct-gttgaccag 59
|||||||||||||||||| |||||||||||||||||| |||||| ||| | ||||| ||
Sbjct: 7 cactttcctggaaaccaagccaaatttttctttgactggaaagtatttttcgttgatcaa 66
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagt 114
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 67 cttttctaatagcaaacaaacacaggaaagtttggaaagtggtttcccggaaagt 121
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 135 bits (68), Expect = 8e-33
Identities = 105/116 (90%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| | ||||||| |||||||| |||||||||| | ||||||||
Sbjct: 20 cactttcctggaaaccaagctaaattttcctttgactggaaagtgttttccgttgaccaa 79
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 80 cttttctaatggcagacaaacacaggaaagtttggaaagtggcttcccggaaagtg 135
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 135 bits (68), Expect = 8e-33
Identities = 102/112 (91%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccagctt 62
||||||| ||||||| |||||||||||||||||| ||||||||| | |||||||| |||
Sbjct: 126 tttcctgaaaaccaagccaaatttttctttgactgaaaagtgttttccgttgaccaactt 67
Query: 63 tcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagt 114
| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 66 ttttaatggcaaacaaacatgggaaagtttggaaagtggtttcccggaaagt 15
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 125 bits (63), Expect = 8e-30
Identities = 103/115 (89%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||| | |||||||||| | |||||||
Sbjct: 14 cactttcctggaaaccaagccaaattttcctttgattggaaagtgttttccattgaccaa 73
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagt 114
||||||||||| |||||||||| |||||| ||||||||||||||||| |||||||
Sbjct: 74 ctttcctaatgtcaaacaaacacaggaaaatttggaaagtggtttccaggaaagt 128
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 125 bits (63), Expect = 8e-30
Identities = 103/115 (89%), Gaps = 1/115 (0%)
Strand = Plus / Minus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||||||| ||||||||| |||||| | |||||||||| | |||||||
Sbjct: 126 cactttcctggaaaccaagccaaattttcctttgattggaaagtgttttccattgaccaa 67
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagt 114
||||||||||| |||||||||| |||||| ||||||||||||||||| |||||||
Sbjct: 66 ctttcctaatgtcaaacaaacacaggaaaatttggaaagtggtttccaggaaagt 12
>54345_ptc-miRf12523-akr:pmrd
Length = 231
Score = 119 bits (60), Expect = 5e-28
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt-ctgttgaccag 59
|||||||||||||| ||| ||||||||| |||||||| |||||||||| | ||||||||
Sbjct: 139 cactttcctggaaatcaagccaaattttcctttgactggaaagtgttttccgttgaccaa 80
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaaagtg 115
|||| | |||| |||||||||| ||||||||||||||| || ||||||||||||||
Sbjct: 79 cttttcaaatgtcaaacaaacacaggaaagtttggaaaatgatttcccggaaagtg 24
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 117 bits (59), Expect = 2e-27
Identities = 96/107 (89%), Gaps = 1/107 (0%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgtttct-gttgaccag 59
|||| |||||||||| || ||||||||| ||||||||||||||||||| | ||||||||
Sbjct: 6 cactgtcctggaaacgaagccaaattttcctttgactagaaagtgtttttcgttgaccaa 65
Query: 60 ctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcc 106
|||| |||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 66 cttttctaatgacaaacaaatacaggaaagtttggaaagtggtttcc 112
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 117 bits (59), Expect = 2e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 17 tttctgttgaccaactttcctaatggcaaacaaacacaggaaagtttggaaagtggtttc 76
Query: 106 ccggaaa 112
|||||||
Sbjct: 77 ccggaaa 83
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 105 bits (53), Expect = 7e-24
Identities = 81/89 (91%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 25 tttttctttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacata 83
|||||| ||||| |||||||||| | |||||||| |||||||||||||||||||||| |
Sbjct: 4 tttttcgttgaccggaaagtgttttccgttgaccacctttcctaatggcaaacaaacaca 63
Query: 84 ggaaagtttggaaagtggtttcccggaaa 112
||||||||||||||||||||||| |||||
Sbjct: 64 ggaaagtttggaaagtggtttccgggaaa 92
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 99.6 bits (50), Expect = 4e-22
Identities = 75/82 (91%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 32 ttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacataggaaagt 90
|||||| |||||||||| | |||||||| ||||||||||| |||||||| | ||||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccacctttcctaatgacaaacaaatacaggaaagt 60
Query: 91 ttggaaagtggtttcccggaaa 112
||||||||||||||||||||||
Sbjct: 61 ttggaaagtggtttcccggaaa 82
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 97.6 bits (49), Expect = 2e-21
Identities = 80/89 (89%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 25 tttttctttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacata 83
|||||| ||||| |||||||||| | |||||||| |||||||||||||||||||||| |
Sbjct: 4 tttttcgttgaccggaaagtgttttccgttgaccaactttcctaatggcaaacaaacaca 63
Query: 84 ggaaagtttggaaagtggtttcccggaaa 112
||||||||| ||||||||||| |||||||
Sbjct: 64 ggaaagtttagaaagtggttttccggaaa 92
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 3e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 17 tttctgttgaccaacttttctaatgacaaacaaacacaggaaagtttggaaagtggtttc 76
Query: 106 ccg 108
|||
Sbjct: 77 ccg 79
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 93.7 bits (47), Expect = 3e-20
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
||||||||||||| |||| |||||| |||||||||| |||||||||||||||||||||||
Sbjct: 17 tttctgttgaccaacttttctaatgacaaacaaacacaggaaagtttggaaagtggtttc 76
Query: 106 ccg 108
|||
Sbjct: 77 ccg 79
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 93.7 bits (47), Expect = 3e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
|||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 33 tttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaaagtggtttc 92
Query: 106 ccggaaa 112
|||||||
Sbjct: 93 ccggaaa 99
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 93.7 bits (47), Expect = 3e-20
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
|||| |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 83 tttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaaagtggtttc 24
Query: 106 ccggaaa 112
|||||||
Sbjct: 23 ccggaaa 17
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 89.7 bits (45), Expect = 4e-19
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 51 gttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccgga 110
|||||||| |||| || |||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 37 gttgaccaacttttcttatggcaaacaaacacaggaaagtttggaaagtggtttcccgaa 96
Query: 111 aagtg 115
|||||
Sbjct: 97 aagtg 101
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgac 36
|||||||||||||||||| ||||||||||| |||||
Sbjct: 7 cactttcctggaaaccaagccaaatttttcgttgac 42
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 89.7 bits (45), Expect = 4e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 52 ttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttcccggaa 111
||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 84 ttgaccaacttttctaatggcaaacaaacacaggaaagtttggaaagtggtttcctggaa 143
Query: 112 a 112
|
Sbjct: 144 a 144
Score = 46.1 bits (23), Expect = 6e-06
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 6 tcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 17 tcctggaaaccaagtcaaatttt-ctttgactggaaagtgttt 58
>52852_ptc-miRf11030-akr:pmrd
Length = 114
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
|||| |||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 26 tttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaaagtggtttc 85
Query: 106 ccggaaag 113
|||||||
Sbjct: 86 tcggaaag 93
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 85.7 bits (43), Expect = 7e-18
Identities = 53/55 (96%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtg-tttctgttgacc 57
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 83 tttcctggaaaccaaaccaaatttttctttgactggaaagtgttttctgttgacc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 143 ggaaagtggtttcccggaaa 124
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactggaaagtgttt 105
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 77.8 bits (39), Expect = 2e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 31 tttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacataggaaag 89
||||||| |||||||||| | |||||||| |||||||||| |||||||||| | |||||
Sbjct: 102 tttgactggaaagtgttttccgttgaccaactttcctaataacaaacaaacacatgaaag 43
Query: 90 tttggaaagtggttt 104
|||||||||||||||
Sbjct: 42 tttggaaagtggttt 28
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 77.8 bits (39), Expect = 2e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
|||| |||||||| ||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 18 tttccgttgaccaattttcctaatggcaaacaaacacaagaaagtttagaaagtggtttc 77
Query: 106 ccg 108
|||
Sbjct: 78 ccg 80
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 77.8 bits (39), Expect = 2e-15
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
|||| |||||||| ||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 26 tttccgttgaccaattttcctaatggcaaacaaacacaagaaagtttagaaagtggtttc 85
Query: 106 ccg 108
|||
Sbjct: 86 ccg 88
>53306_ptc-miRf11484-akr:pmrd
Length = 96
Score = 75.8 bits (38), Expect = 6e-15
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 32 ttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacataggaaagt 90
|||||| |||||||||| | |||||||| ||||||||| ||||| |||||| ||||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
Query: 91 ttggaaagtggtttcccggaaa 112
|||||| |||| ||||||||||
Sbjct: 61 ttggaaggtgg-ttcccggaaa 81
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 73.8 bits (37), Expect = 2e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 27 tttctttgactagaaagtgttt-ctgttgaccagctttcctaatggcaaacaaacatagg 85
||||||||||| |||| ||||| |||||||||| |||| |||||| ||||||||| | |
Sbjct: 106 tttctttgactggaaaatgttttctgttgaccaacttttctaatgacaaacaaacgcatg 47
Query: 86 aaagtttggaaagtggtttcc 106
||||||| |||||||||||||
Sbjct: 46 aaagtttagaaagtggtttcc 26
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgttt 99
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 8 ctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 77 ctggaaaccaaaccaaatttttctttgactggaaagtgttt 37
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 55 tttcctagaaaccaaaccaaatttttctttgactggaaagtgttt 99
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 55 tttcctggaaaccaaaccaaatttttctttgactgaaaagtgttt 99
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 73.8 bits (37), Expect = 2e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4 tttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 61 tttcctggaaaccaaaccaaatttttttttgactggaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct: 58 cactttcctggaaaccaaaccaaaattttttttgactggaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
|||||||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct: 62 cactttcctggaaaccaaaccaaaattttttttgactggaaagtgttt 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 89 gtttggaaagtggtttcccggaaa 112
||||||||||||||||||||||||
Sbjct: 1 gtttggaaagtggtttcccggaaa 24
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
||||||||| |||| |||||||||||||||||||||| ||||||||||
Sbjct: 52 cactttcctagaaatcaaaccaaatttttctttgactggaaagtgttt 99
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 63.9 bits (32), Expect = 2e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
||||||||||||| | |||||||||| |||||||||| ||||||||||
Sbjct: 58 cactttcctggaatctaaaccaaattgttctttgactggaaagtgttt 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 29 ggaaagtggtttcccggaaa 10
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtg-tttctgttgacc 57
|||||||||| |||||||||||||||||| ||| | | ||||||| ||||||||||||
Sbjct: 60 cactttcctgaaaaccaaaccaaatttttttttaattggaaagtgttttctgttgacc 117
>52890_ptc-miRf11068-akr:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagt 44
||||||||||||| |||| ||||||||| |||| ||| ||||||
Sbjct: 15 cactttcctggaacccaagccaaattttcctttaactggaaagt 58
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatttttctttgactagaaagtgttt 48
||||||||| |||| ||| ||||||||||||||||| |||||||||
Sbjct: 53 cactttccttgaaatcaagtcaaatttttctttgactgaaaagtgttt 100
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 22 aaatttttctttgactagaaagtgttt 48
|||||||||||||||| ||||||||||
Sbjct: 2 aaatttttctttgactggaaagtgttt 28
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 22 aaatttttctttgactagaaagtgttt 48
|||||||||||||||| ||||||||||
Sbjct: 114 aaatttttctttgactggaaagtgttt 88
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatt 26
|||||||||| |||||||||||||||
Sbjct: 57 cactttcctgaaaaccaaaccaaatt 82
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatt 26
|||||||||| |||||||||||||||
Sbjct: 52 cactttcctgaaaaccaaaccaaatt 77
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 cactttcctggaaaccaaaccaaatt 26
|||||||||| |||||||||||||||
Sbjct: 52 cactttcctgaaaaccaaaccaaatt 77
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 93 ggaaagtggtttcccggaaa 112
||||||||||||||||||||
Sbjct: 1 ggaaagtggtttcccggaaa 20
