miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52455_ptc-miRf10633-akr:pmrd
Length = 151
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Minus
Query: 1 atgatgagggctagaaagggcactcgaaaggaaagagatctttttccttttgagtttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgatgagggctagaaagggcactcgaaaggaaagagatctttttccttttgagtttgct 86
Query: 61 ttctagccttcatcattaaaataatgttttttcaggtcctatccctttcctttcgagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ttctagccttcatcattaaaataatgttttttcaggtcctatccctttcctttcgagtgc 26
Query: 121 gctttctagccctcacat 138
||||||||||||||||||
Sbjct: 25 gctttctagccctcacat 8
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tgagggctagaaagggcactcgaaaggaaag 35
|||||||||||||| ||||||||||||||||
Sbjct: 11 tgagggctagaaagcgcactcgaaaggaaag 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 105 ctttcctttcgagtgcgctttctagccctca 135
|||||||||||||||| ||||||||||||||
Sbjct: 111 ctttcctttcgagtgccctttctagccctca 141
>52044_ptc-miRf10222-akr:pmrd
Length = 153
Score = 274 bits (138), Expect = 2e-74
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 atgatgagggctagaaagggcactcgaaaggaaagagatctttttccttttgagtttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 atgatgagggctagaaagggcactcgaaaggaaagagatctttttccttttgagtttgct 67
Query: 61 ttctagccttcatcattaaaataatgttttttcaggtcctatccctttcctttcgagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ttctagccttcatcattaaaataatgttttttcaggtcctatccctttcctttcgagtgc 127
Query: 121 gctttctagccctcacat 138
||||||||||||||||||
Sbjct: 128 gctttctagccctcacat 145
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 105 ctttcctttcgagtgcgctttctagccctca 135
|||||||||||||||| ||||||||||||||
Sbjct: 42 ctttcctttcgagtgccctttctagccctca 12
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 5 tgagggctagaaagggcactcgaaaggaaag 35
|||||||||||||| ||||||||||||||||
Sbjct: 142 tgagggctagaaagcgcactcgaaaggaaag 112
