miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52015_ptc-miRf10193-akr:pmrd
Length = 137
Score = 272 bits (137), Expect = 6e-74
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 1 tagccttgggtttagcggccaagccaaacctaaaatagccttgggtctggcggccaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagccttgggtttagcggccaagccaaacctaaaatagccttgggtctggcggccaagaa 60
Query: 61 gttcaaaagatgttgggtttagctgggtaaccggattcaatgctagtaggttctgctggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttcaaaagatgttgggtttagctgggtaaccggattcaatgctagtaggttctgctggc 120
Query: 121 agcaggacccaacgcta 137
|||||||||||||||||
Sbjct: 121 agcaggacccaacgcta 137
>52259_ptc-miRf10437-akr:pmrd
Length = 93
Score = 60.0 bits (30), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 34 aatagccttgggtctggcggccaagaagttcaaaagatgttgggtttagctggg 87
|||||| || |||||||||| |||||||||||||| |||||||||| ||||||
Sbjct: 10 aatagcattcggtctggcggttaagaagttcaaaagttgttgggtttggctggg 63
>52915_ptc-miRf11093-akr:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 41 ttgggtctggcggccaagaagttcaaaagatgttgggtttagctggg 87
||||||||| ||||||||||| |||||| || ||||||| ||||||
Sbjct: 17 ttgggtctgatggccaagaagtccaaaagttgctgggtttggctggg 63
>51927_ptc-miRf10105-akr:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 41 ttgggtctggcggccaagaagttcaaaagatgttgggtttagctggg 87
||||||||| ||||||||||| |||||| || ||||||| ||||||
Sbjct: 17 ttgggtctgatggccaagaagtccaaaagttgctgggtttggctggg 63
