miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52403_ptc-miRf10581-akr:pmrd
Length = 130
Score = 258 bits (130), Expect = 9e-70
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgacataatttttagctgccgacagcggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttggctgtcgatttttgaatcggcagcgacataatttttagctgccgacagcggcac 60
Query: 61 agttggctgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agttggctgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcga 120
Query: 121 tagcaaaaaa 130
||||||||||
Sbjct: 121 tagcaaaaaa 130
>52568_ptc-miRf10746-akr:pmrd
Length = 170
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 12 cgatttttgaatcggcagcgacataatttttagctgccga 51
|||||| |||||||||||||||||||||||| ||||||||
Sbjct: 8 cgatttatgaatcggcagcgacataatttttggctgccga 47
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgaca 34
||||||||| ||||| ||||||||||||||||
Sbjct: 104 tttggctgttgatttctgaatcggcagcgaca 135
>52291_ptc-miRf10469-akr:pmrd
Length = 180
Score = 63.9 bits (32), Expect = 3e-11
Identities = 59/68 (86%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgata 122
||||||| |||||||||||| |||||| |||||| ||||||| ||||||||||||| |
Sbjct: 4 ttggctgctgatttctaaatcggcagcgatgcagttttgctgccaatttctgaatcgaca 63
Query: 123 gcaaaaaa 130
|| |||||
Sbjct: 64 gcgaaaaa 71
Score = 46.1 bits (23), Expect = 6e-06
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 71 cgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagca 125
|||||||| |||| ||||||||||||| || || |||||| |||||||| ||||
Sbjct: 84 cgatttctgaatcggcagcgacgcagttttgatgtcgatttatgaatcgacagca 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
||||||||| |||||| |||||||||||||||
Sbjct: 73 tttttggctaccgatttctgaatcggcagcgac 105
>53816_ptc-miRf11994-akr:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 3 gctgtcgatttctgaatcggcagcaacacaatttctagctgccga 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcga 91
||||||| ||||||||||||| |||||||
Sbjct: 72 ttggctgccgatttctaaatcgacagcga 100
>53815_ptc-miRf11993-akr:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 3 gctgtcgatttctgaatcggcagcaacacaatttctagctgccga 47
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcga 91
||||||| ||||||||||||| |||||||
Sbjct: 72 ttggctgccgatttctaaatcgacagcga 100
>53814_ptc-miRf11992-akr:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataattttt 42
||||||||||| |||||||||||||||| |||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaattttt 40
>53813_ptc-miRf11991-akr:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataattttt 42
||||||||||| |||||||||||||||| |||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaattttt 40
>52356_ptc-miRf10534-akr:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataattttt 42
||||||||||| |||||||||||||||| |||||||
Sbjct: 5 gctgtcgatttctgaatcggcagcgacacaattttt 40
>52226_ptc-miRf10404-akr:pmrd
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcagcga 32
|||||||||||||||| ||||||||||||||
Sbjct: 71 ttttggctgtcgatttctgaatcggcagcga 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgccga 51
|||| |||||| |||||||||||||||| | ||||| ||||||||
Sbjct: 3 gctgccgatttctgaatcggcagcgacacactttttggctgccga 47
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 tgctgccgatttctgaatcg 119
||||||||||||||||||||
Sbjct: 2 tgctgccgatttctgaatcg 21
>53396_ptc-miRf11574-akr:pmrd
Length = 103
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 1 tttttggctgtcgatttttgaatcggcagc 30
||||| ||||||||||||||||||||||||
Sbjct: 69 ttttttgctgtcgatttttgaatcggcagc 40
>53818_ptc-miRf11996-akr:pmrd
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||||| |||||||||||| ||| ||||| || |||||||
Sbjct: 6 gctgtcgatttctgaatcggcagcaacacaatttctaactgccga 50
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgac 92
||||||| ||||||||||||| ||||||||
Sbjct: 75 ttggctgccgatttctaaatcgacagcgac 104
>53817_ptc-miRf11995-akr:pmrd
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||||| |||||||||||| ||| ||||| || |||||||
Sbjct: 6 gctgtcgatttctgaatcggcagcaacacaatttctaactgccga 50
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgac 92
||||||| ||||||||||||| ||||||||
Sbjct: 75 ttggctgccgatttctaaatcgacagcgac 104
>53514_ptc-miRf11692-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 68 tgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagc 124
||||||||| | |||| |||| |||| |||| ||||||| |||||||||||| ||||
Sbjct: 44 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagc 100
>53476_ptc-miRf11654-akr:pmrd
Length = 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgacat 35
||||| ||||||||| |||||||||||||||||
Sbjct: 5 tttggttgtcgatttctgaatcggcagcgacat 37
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgac 33
|||||||| |||||| |||||||||||||||
Sbjct: 75 tttggctgccgatttctgaatcggcagcgac 105
>53402_ptc-miRf11580-akr:pmrd
Length = 113
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcg 31
||||||||||||||| |||||||||||||
Sbjct: 5 tttggctgtcgatttatgaatcggcagcg 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 101 gctgccgatttctgaatcga 120
||||||||||||||||||||
Sbjct: 82 gctgccgatttctgaatcga 101
>52562_ptc-miRf10740-akr:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
|||||||||| |||||| |||||||||||||||
Sbjct: 68 tttttggctgccgatttctgaatcggcagcgac 100
>52211_ptc-miRf10389-akr:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 68 tgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagc 124
||||||||| | |||| |||| |||| |||| ||||||| |||||||||||| ||||
Sbjct: 40 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagc 96
>52192_ptc-miRf10370-akr:pmrd
Length = 112
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgacat 35
||||| ||||||||| |||||||||||||||||
Sbjct: 4 tttggttgtcgatttctgaatcggcagcgacat 36
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgac 33
|||||||| |||||| |||||||||||||||
Sbjct: 74 tttggctgccgatttctgaatcggcagcgac 104
>52023_ptc-miRf10201-akr:pmrd
Length = 179
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
|||||||||| |||||||||||||||||||||
Sbjct: 109 tttttggctgctgatttttgaatcggcagcgac 77
>52022_ptc-miRf10200-akr:pmrd
Length = 179
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
|||||||||| |||||||||||||||||||||
Sbjct: 109 tttttggctgctgatttttgaatcggcagcgac 77
>51997_ptc-miRf10175-akr:pmrd
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 68 tgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaatcgatagc 124
||||||||| | |||| |||| |||| |||| ||||||| |||||||||||| ||||
Sbjct: 40 tgtcgatttatgaatcgacagtgacgtagttttgctgccaatttctgaatcggtagc 96
>53757_ptc-miRf11935-akr:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcag 29
|||||||||||||||| |||||||||||
Sbjct: 3 ttttggctgtcgatttctgaatcggcag 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 86 cagcgacgcagttgtgctgccgatttctgaatcg 119
||||||| ||||| ||||| ||||||||||||||
Sbjct: 99 cagcgacacagttttgctgtcgatttctgaatcg 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcg 31
||||||||||| |||||||||||||
Sbjct: 114 gctgtcgatttctgaatcggcagcg 138
>53324_ptc-miRf11502-akr:pmrd
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcag 29
|||||||||||||||| |||||||||||
Sbjct: 6 ttttggctgtcgatttctgaatcggcag 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 86 cagcgacgcagttgtgctgccgatttctgaatcg 119
||||||| ||||| ||||| ||||||||||||||
Sbjct: 102 cagcgacacagttttgctgtcgatttctgaatcg 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcg 31
||||||||||| |||||||||||||
Sbjct: 117 gctgtcgatttctgaatcggcagcg 141
>53078_ptc-miRf11256-akr:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 2e-06
Identities = 51/59 (86%), Gaps = 2/59 (3%)
Strand = Plus / Minus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgca--gttgtgctgccgatttctgaatcg 119
|||||||||||||||| |||| ||||||| ||| ||| ||||||||||||| |||||
Sbjct: 63 ttggctgtcgatttctgaatcgacagcgatgcaattttgggctgccgatttctaaatcg 5
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 4 ttggctgtcgatttttgaatcggcagcga 32
|||||||||||||| ||||||| ||||||
Sbjct: 63 ttggctgtcgatttctgaatcgacagcga 35
>53010_ptc-miRf11188-akr:pmrd
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 57 gcacagttggctgtcgatttctaaatcaacagcgacgcagttgtgctgccgatttctgaa 116
||||||||| |||||||||||| |||| || || |||| | |||||||||||| ||||
Sbjct: 1 gcacagttgactgtcgatttctgaatcggcaatgatgcaggtttgctgccgatttttgaa 60
Query: 117 tcgatagc 124
||| ||||
Sbjct: 61 tcggtagc 68
>52778_ptc-miRf10956-akr:pmrd
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 90 gacgcagttgtgctgccgatttct 113
||||||||||||||||||||||||
Sbjct: 43 gacgcagttgtgctgccgatttct 20
>54342_ptc-miRf12520-akr:pmrd
Length = 180
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||| ||||||||||||| || | ||||| ||||||||
Sbjct: 42 tgtcgatttctgaatcggcagcggcaaagtttttggctgccga 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
|||||||||| |||||| |||||||||||||
Sbjct: 71 tttttggctgccgatttctgaatcggcagcg 101
>54322_ptc-miRf12500-akr:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 gatttttgaatcggcagcgacataattttta 43
||||| |||||||||||||||| ||||||||
Sbjct: 9 gatttctgaatcggcagcgacacaattttta 39
>54228_ptc-miRf12406-akr:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
||||||||||||||||| |||||||| ||||
Sbjct: 39 tttttggctgtcgatttctgaatcggtagcg 9
>53936_ptc-miRf12114-akr:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
|||||||||| |||||| |||||||||||||
Sbjct: 41 tttttggctgccgatttctgaatcggcagcg 71
>53583_ptc-miRf11761-akr:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
||||||||||||||||| |||||||| ||||
Sbjct: 39 tttttggctgtcgatttctgaatcggtagcg 9
>53457_ptc-miRf11635-akr:pmrd
Length = 74
Score = 46.1 bits (23), Expect = 6e-06
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 86 cagcgacgcagttgt-gctgccgatttctgaatcg 119
||||||||||||| | |||||||||||||||||||
Sbjct: 30 cagcgacgcagttttcgctgccgatttctgaatcg 64
>53335_ptc-miRf11513-akr:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 66 gctgtcgatttctaaatcaacagcgacgcagttgt-gctgccgatttctgaatcg 119
|||| |||||||| |||| ||||||||||||| | |||||||||||||| ||||
Sbjct: 43 gctgccgatttcttgatcatcagcgacgcagttttcgctgccgatttctgcatcg 97
>53334_ptc-miRf11512-akr:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 66 gctgtcgatttctaaatcaacagcgacgcagttgt-gctgccgatttctgaatcg 119
|||| |||||||| |||| ||||||||||||| | |||||||||||||| ||||
Sbjct: 43 gctgccgatttcttgatcatcagcgacgcagttttcgctgccgatttctgcatcg 97
>53333_ptc-miRf11511-akr:pmrd
Length = 107
Score = 46.1 bits (23), Expect = 6e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 66 gctgtcgatttctaaatcaacagcgacgcagttgt-gctgccgatttctgaatcg 119
|||| |||||||| |||| ||||||||||||| | |||||||||||||| ||||
Sbjct: 43 gctgccgatttcttgatcatcagcgacgcagttttcgctgccgatttctgcatcg 97
>53192_ptc-miRf11370-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgacataatttttagctgccga 51
||||||||| ||||||||||||| || | ||||| ||||||||
Sbjct: 42 tgtcgatttctgaatcggcagcggcaaagtttttggctgccga 84
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
|||||||||| |||||| |||||||||||||
Sbjct: 71 tttttggctgccgatttctgaatcggcagcg 101
>52437_ptc-miRf10615-akr:pmrd
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 cgatttttgaatcggcagcgacataattttt 42
|||||| |||||||||| |||||||||||||
Sbjct: 12 cgatttctgaatcggcaacgacataattttt 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 86 cagcgacgcagttgtgctgccgatttctgaatc 118
||||||||||||| ||||| ||||||||||||
Sbjct: 64 cagcgacgcagtttggctgctgatttctgaatc 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 103 tgccgatttctgaatcgatagcaa 126
||||||||||||||||| ||||||
Sbjct: 118 tgccgatttctgaatcggtagcaa 141
>52436_ptc-miRf10614-akr:pmrd
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 cgatttttgaatcggcagcgacataattttt 42
|||||| |||||||||| |||||||||||||
Sbjct: 12 cgatttctgaatcggcaacgacataattttt 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 86 cagcgacgcagttgtgctgccgatttctgaatc 118
||||||||||||| ||||| ||||||||||||
Sbjct: 64 cagcgacgcagtttggctgctgatttctgaatc 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 103 tgccgatttctgaatcgatagcaa 126
||||||||||||||||| ||||||
Sbjct: 118 tgccgatttctgaatcggtagcaa 141
>52434_ptc-miRf10612-akr:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgac 33
||||||||||||||| |||||||||| ||||
Sbjct: 54 tttggctgtcgatttctgaatcggcaacgac 84
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagtt 98
|||||||||||||||| |||| || ||||||||||
Sbjct: 55 ttggctgtcgatttctgaatcggcaacgacgcagtt 90
>52433_ptc-miRf10611-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgac 33
||||||||||||||| |||||||||| ||||
Sbjct: 2 tttggctgtcgatttctgaatcggcaacgac 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagtt 98
|||||||||||||||| |||| || ||||||||||
Sbjct: 3 ttggctgtcgatttctgaatcggcaacgacgcagtt 38
>52432_ptc-miRf10610-akr:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 tttggctgtcgatttttgaatcggcagcgac 33
||||||||||||||| |||||||||| ||||
Sbjct: 2 tttggctgtcgatttctgaatcggcaacgac 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagtt 98
|||||||||||||||| |||| || ||||||||||
Sbjct: 3 ttggctgtcgatttctgaatcggcaacgacgcagtt 38
>52027_ptc-miRf10205-akr:pmrd
Length = 148
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 12 cgatttttgaatcggcagcgacataattttt 42
|||||| |||||||||| |||||||||||||
Sbjct: 135 cgatttctgaatcggcaacgacataattttt 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 86 cagcgacgcagttgtgctgccgatttctgaatc 118
||||||||||||| ||||| ||||||||||||
Sbjct: 83 cagcgacgcagtttggctgctgatttctgaatc 51
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 103 tgccgatttctgaatcgatagcaa 126
||||||||||||||||| ||||||
Sbjct: 29 tgccgatttctgaatcggtagcaa 6
>51979_ptc-miRf10157-akr:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcg 31
||||||| ||||||||| |||||||||||||
Sbjct: 34 tttttggttgtcgatttctgaatcggcagcg 64
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 ttggctgtcgatttttgaatcggcagcga 32
||||||| ||||||||||||||||||||
Sbjct: 71 ttggctgctgatttttgaatcggcagcga 99
>51958_ptc-miRf10136-akr:pmrd
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagt--tgtgctgccgatttctgaatcga 120
||||||| |||||||||||| |||||||| |||| | ||||||||||||| |||||
Sbjct: 2 ttggctgctgatttctaaatcgacagcgacacagtaattggctgccgatttctaaatcgg 61
Query: 121 tagcaa 126
||||||
Sbjct: 62 tagcaa 67
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 ttggctgtcgatttttgaatcggcagcga 32
|||| ||||||||| ||||||||||||||
Sbjct: 85 ttggttgtcgatttctgaatcggcagcga 113
>53569_ptc-miRf11747-akr:pmrd
Length = 73
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgaca 34
|||||||||| |||||| | ||||||||||||||
Sbjct: 2 tttttggctgccgatttctaaatcggcagcgaca 35
>52968_ptc-miRf11146-akr:pmrd
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgaca 34
||||||||||| ||||| ||||||| ||||||||
Sbjct: 74 tttttggctgttgatttctgaatcgacagcgaca 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 ttggctgtcgatttttgaatcggcagcga 32
|||| ||||||||| ||||||||||||||
Sbjct: 5 ttggttgtcgatttctgaatcggcagcga 33
>52516_ptc-miRf10694-akr:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagcgacataatttttagctgc 48
|||| |||||||||||||| |||||||| | ||||| |||||
Sbjct: 3 gctgccgatttttgaatcgacagcgacacagtttttggctgc 44
>52435_ptc-miRf10613-akr:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcgg 26
||||||||||||||||||||| ||||
Sbjct: 69 tttttggctgtcgatttttgattcgg 94
>52401_ptc-miRf10579-akr:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagc 30
|||||||||| |||||||||||||| ||||
Sbjct: 34 tttttggctgccgatttttgaatcgacagc 63
>54331_ptc-miRf12509-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 4 ttggctgtcgatttttgaatcggcagcgacataattt 40
|||||| ||||||| |||||||||||| ||| |||||
Sbjct: 5 ttggctatcgatttctgaatcggcagcaacacaattt 41
>54171_ptc-miRf12349-akr:pmrd
Length = 62
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 cgatttttgaatcggcagcga 32
|||||||||||||||||||||
Sbjct: 42 cgatttttgaatcggcagcga 62
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcga 32
||||||||| ||||||||||||||
Sbjct: 5 tgtcgatttctgaatcggcagcga 28
>54169_ptc-miRf12347-akr:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 ctgtcgatttttgaatcggcagcga 32
|||||||||| ||||||||||||||
Sbjct: 5 ctgtcgatttctgaatcggcagcga 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcagc 30
|||| ||||||||||| ||||||||||||
Sbjct: 96 tttttgctgtcgatttctgaatcggcagc 124
>53403_ptc-miRf11581-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
||||||||||||||| | |||||||||| ||||
Sbjct: 73 tttttggctgtcgatgtctgaatcggcatcgac 105
>53081_ptc-miRf11259-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgac 33
||||||||| |||||||||||||||
Sbjct: 88 tgtcgatttctgaatcggcagcgac 112
>53080_ptc-miRf11258-akr:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgac 33
||||||||| |||||||||||||||
Sbjct: 92 tgtcgatttctgaatcggcagcgac 116
>52782_ptc-miRf10960-akr:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 51/60 (85%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 63 ttggctgtcgatttctaaatcaacagcgacgcagttgt--gctgccgatttctgaatcga 120
||||||| ||||||| |||| |||||||||||||| | ||| |||||||||||||||
Sbjct: 5 ttggctgctgatttctgaatcgacagcgacgcagtttttgcctgtcgatttctgaatcga 64
>52380_ptc-miRf10558-akr:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 cgatttttgaatcggcagcga 32
|||||||||||||||||||||
Sbjct: 155 cgatttttgaatcggcagcga 175
>52292_ptc-miRf10470-akr:pmrd
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1 tttttggctgtcgatttttgaatcggcagcgac 33
||||||||| |||||| |||||||||||||||
Sbjct: 37 tttttggctaccgatttctgaatcggcagcgac 69
>52025_ptc-miRf10203-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgac 33
||||||||| |||||||||||||||
Sbjct: 88 tgtcgatttctgaatcggcagcgac 112
>52024_ptc-miRf10202-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 tgtcgatttttgaatcggcagcgac 33
||||||||| |||||||||||||||
Sbjct: 88 tgtcgatttctgaatcggcagcgac 112
>54144_ptc-miRf12322-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagc 30
|||| |||||||||||||||||||
Sbjct: 9 gctgccgatttttgaatcggcagc 32
>54143_ptc-miRf12321-akr:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 gctgtcgatttttgaatcggcagc 30
|||| |||||||||||||||||||
Sbjct: 8 gctgccgatttttgaatcggcagc 31
>53323_ptc-miRf11501-akr:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcagcgac 33
||||||||| |||||| || ||||||||||||
Sbjct: 52 ttttggctgccgatttctggatcggcagcgac 83
>52963_ptc-miRf11141-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcagcgac 33
|||| ||||||||||| || ||||||||||||
Sbjct: 38 ttttcgctgtcgatttctgcatcggcagcgac 69
>52647_ptc-miRf10825-akr:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 101 gctgccgatttctgaatcga 120
||||||||||||||||||||
Sbjct: 31 gctgccgatttctgaatcga 12
>52577_ptc-miRf10755-akr:pmrd
Length = 76
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 101 gctgccgatttctgaatcga 120
||||||||||||||||||||
Sbjct: 31 gctgccgatttctgaatcga 12
>52004_ptc-miRf10182-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 2 ttttggctgtcgatttttgaatcggcagcgac 33
||||||||| |||||| || ||||||||||||
Sbjct: 106 ttttggctgccgatttctgcatcggcagcgac 137
