miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53782_ptc-miRf11960-akr:pmrd
Length = 68
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 32 atccagattcaagaaccttgggtctgacg 60
|||||||| |||||| |||||||||||||
Sbjct: 4 atccagatccaagaaacttgggtctgacg 32
>53617_ptc-miRf11795-akr:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 133 gacccaagtgatttgggtctg 153
|||||||||||||||||||||
Sbjct: 70 gacccaagtgatttgggtctg 90
>52332_ptc-miRf10510-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 2 ccagacccaagagacttgggt 22
|||||||||||||||||||||
Sbjct: 97 ccagacccaagagacttgggt 77
>53483_ptc-miRf11661-akr:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 3 cagacccaagagacttgggtgtggcact 30
|||||||||||| ||||||| |||||||
Sbjct: 34 cagacccaagagccttgggtttggcact 7
>53482_ptc-miRf11660-akr:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 3 cagacccaagagacttgggtgtggcact 30
|||||||||||| ||||||| |||||||
Sbjct: 39 cagacccaagagccttgggtttggcact 12
