miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 91.7 bits (46), Expect = 7e-20
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 4 ttaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctggaccg 63
||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct: 81 ttaaacccggaccggcccggcgggtcgacccgggacccggtcgacccggtggctggaccg 22
Query: 64 gttcgggttt 73
|| |||||||
Sbjct: 21 gtccgggttt 12
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 87 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 28
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 27 ccggtccgggttt 15
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 89.7 bits (45), Expect = 3e-19
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 88 ttattaaacccggtccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 29
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 28 ccggtccgggttt 16
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 81.8 bits (41), Expect = 6e-17
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| | |||||||||||||||| |||||||||| |||||||| |||||
Sbjct: 84 ttattaaacccggtctggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 81.8 bits (41), Expect = 6e-17
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| ||||||||||||||| || |||||||||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcaacccgggacccggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 81.8 bits (41), Expect = 6e-17
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccggg 53
||||||||||||| |||||||||||||||||| |||||||||| |||||||||
Sbjct: 4 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggg 56
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| || ||||||||||||||| |||||| ||| |||||||| |||||
Sbjct: 78 ttattaaacccggcccagcccggcgggtcgacccgggactcggtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||||||||||| ||||||||| |||||| | |||||
Sbjct: 78 ttattaaacccggtccggcccggcgggtcgacccgggacccgatcgacccagtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||| ||| |||||||||||||||||| |||||||| | |||||||| |||||
Sbjct: 78 ttattaaactcggcccggcccggcgggtcgacccgggacccagtcgacccggtggctgga 19
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
|||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||
Sbjct: 87 ttattaaacccgacccggcccggcgggtcgacccgggacccgatcgacccggtggctgga 28
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 27 ccggtccgggttt 15
>52447_ptc-miRf10625-akr:pmrd
Length = 128
Score = 73.8 bits (37), Expect = 2e-14
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 11 cggaccggcccggcgggtcgactcgggacccggccgacccgggacctggaccg 63
||||||||||||| |||||||| |||||| ||||||||||||||||||||||
Sbjct: 3 cggaccggcccggtgggtcgacctgggacctggccgacccgggacctggaccg 55
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 71.9 bits (36), Expect = 6e-14
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgg 52
||||||||||||| |||||||||||||||||| ||||||||| ||||||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccgatcgacccgg 33
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 71.9 bits (36), Expect = 6e-14
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 6 aaacccggaccggcccggcgggtcgactcgggacccggccgacccggg 53
||||||| ||||||||||||||||||| |||||||||| |||||||||
Sbjct: 136 aaacccgaaccggcccggcgggtcgacccgggacccggtcgacccggg 89
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccgg 43
||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 72 ttattaaacccggcccggcccggcgggtcgacccgggacccgg 30
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 67.9 bits (34), Expect = 1e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 18 gcccggcgggtcgactcgggacccggccgacccgggacctggaccggttcgggtttgt 75
|||||||| || ||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 127 gcccggcgagttgacccgagacccggccgacccgggggctggaccggttcgggtttgt 70
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 67.9 bits (34), Expect = 1e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 4 ttaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctggaccg 63
||||||| ||||||||||| ||||||||||||||||||| |||||| | | | ||||||
Sbjct: 5 ttaaacctagaccggcccggtgggtcgactcgggacccggtcgacccagtagccggaccg 64
Query: 64 gttcgggttt 73
|| |||||||
Sbjct: 65 gtccgggttt 74
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||| || ||||||| ||||||||||| | |||||| |||||
Sbjct: 4 ttattaaacccggcccggcctggtgggtcgaatcgggacccggtcaacccggtggctgga 63
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 64 ccggtccgggttt 76
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 4 ttaaacccggaccggcccggcgggtcgactcgggacccgg 43
||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 72 ttaaacctggaccggcccggcgggtcgacccgggacccgg 33
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 61.9 bits (31), Expect = 6e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccgg 43
|||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccgg 52
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| ||| ||| |||||||||| ||||||| || ||| |||| |||||
Sbjct: 84 ttattaaacccggcccgacccagcgggtcgacccgggacctggtcgatccggtggctgga 25
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
|||||||||| || |||||||||||||| ||| |||| |||| |||||||| |||||
Sbjct: 87 ttattaaacctggtccggcccggcgggtagacctgggatccggtcgacccggtggctgga 28
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 27 ccggtccgggttt 15
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 58.0 bits (29), Expect = 9e-10
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| || | ||||||||||||| ||||| |||| |||||||| |||||
Sbjct: 86 ttattaaacccggcccaggccggcgggtcgacccggga-ccggtcgacccggtggctgga 28
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 27 ccggtccgggttt 15
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
||||||||||||| |||||||||| |||||| | |||||||| ||| |||| |||||
Sbjct: 81 ttattaaacccggcccggcccggcaggtcgatccaggacccggtcgatccggtggctgga 22
Query: 61 ccggttcgggttt 73
||||| |||||||
Sbjct: 21 ccggtccgggttt 9
>52876_ptc-miRf11054-akr:pmrd
Length = 87
Score = 58.0 bits (29), Expect = 9e-10
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 gaccggcccggcgggtcgactcgggacccggccgacccggg 53
||||||| |||||||||||| || |||||||||||||||||
Sbjct: 87 gaccggctcggcgggtcgacccgagacccggccgacccggg 47
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 72 ttattaaacccggtccggcccggcgggtcgac 41
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 66 ttattaaacccggcccggcccggcgggtcgac 35
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgac 31
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 68 ttattaaacccggcccggcccggcgggtcgac 37
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 4 ttattaaacccggcccggcccggcgggtcgac 35
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgac 31
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||||||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgac 31
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcga 31
||||||||||||| |||||||||||||||||
Sbjct: 65 ttattaaacccggcccggcccggcgggtcga 35
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccggccgacccgggacctgga 60
|||| ||||||||| ||||| ||||||||||| || |||||| ||||||| |||||
Sbjct: 83 ttatcaaacccggatcggcctagcgggtcgacttggaacccggtcgacccgatggctgga 24
Query: 61 ccggttcgggtttgttaa 78
||||| || |||||||||
Sbjct: 23 ccggtccgagtttgttaa 6
>52133_ptc-miRf10311-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 18 gcccggcgggtcgactcgggacccggccgaccc 50
||||||| ||||||| |||||||||||||||||
Sbjct: 7 gcccggctggtcgacccgggacccggccgaccc 39
>52132_ptc-miRf10310-akr:pmrd
Length = 122
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 18 gcccggcgggtcgactcgggacccggccgaccc 50
||||||| ||||||| |||||||||||||||||
Sbjct: 7 gcccggctggtcgacccgggacccggccgaccc 39
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||| ||| ||||||||||||||||||
Sbjct: 71 ttattaaactcggcccggcccggcgggtcgac 40
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| |||||| |||||||||||
Sbjct: 68 ttattaaacccggcccggcctggcgggtcgac 37
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| |||||||||| |||||||
Sbjct: 4 ttattaaacccggcccggcccggcaggtcgac 35
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 9e-07
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacc 40
||||||||||||| |||||| || |||||||| |||||||
Sbjct: 7 ttattaaacccggcccggcctggtgggtcgacccgggacc 46
>52477_ptc-miRf10655-akr:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 1e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 9 cccggaccggcccggcgggtcgactcgggacccggccgaccc 50
||||| ||| |||||||||| ||| || ||||||||||||||
Sbjct: 1 cccggcccgacccggcgggttgacccgcgacccggccgaccc 42
>53781_ptc-miRf11959-akr:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 17 ggcccggcgggtcgactcgggacccggccgacc 49
|||||| ||||||||| |||||||||||||||
Sbjct: 126 ggcccgacgggtcgacctgggacccggccgacc 94
>52940_ptc-miRf11118-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 19 cccggcgggtcgactcgggacccgg 43
||||||||||||||| |||||||||
Sbjct: 109 cccggcgggtcgactagggacccgg 85
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 ggaccggcccggcgggtcgac 32
|||||||||||||||||||||
Sbjct: 1 ggaccggcccggcgggtcgac 21
>51943_ptc-miRf10121-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 19 cccggcgggtcgactcgggacccgg 43
||||||||||||||| |||||||||
Sbjct: 109 cccggcgggtcgactagggacccgg 85
>51942_ptc-miRf10120-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 19 cccggcgggtcgactcgggacccgg 43
||||||||||||||| |||||||||
Sbjct: 109 cccggcgggtcgactagggacccgg 85
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||| ||| |||| |||||||||||||
Sbjct: 69 ttattaaactcggcccggtccggcgggtcgac 38
>53762_ptc-miRf11940-akr:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 9 cccggaccggcccggcgggtcgac 32
||||||| ||||||||||||||||
Sbjct: 121 cccggactggcccggcgggtcgac 98
Score = 38.2 bits (19), Expect = 9e-04
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 37 gacccggccgacccgggacctggaccggttcgggt 71
||||||||||||||||| | |||||||| |||||
Sbjct: 100 gacccggccgacccgggcctgggaccggtccgggt 66
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggtcgac 32
||||||||||||| ||||||| || |||||||
Sbjct: 8 ttattaaacccggcccggcccagcaggtcgac 39
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggc 24
||||||||||||| ||||||||||
Sbjct: 4 ttattaaacccggcccggcccggc 27
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggc 24
||||||||||||| ||||||||||
Sbjct: 67 ttattaaacccggcccggcccggc 44
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggt 28
||||||||||||| ||||||| ||||||
Sbjct: 1 ttattaaacccggtccggcccagcgggt 28
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 ttattaaacccggaccggcccggcgggt 28
||||||||||||| ||||||| ||||||
Sbjct: 1 ttattaaacccggtccggcccagcgggt 28
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggc 24
||||||||||||| ||||||||||
Sbjct: 62 ttattaaacccggcccggcccggc 39
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 38.2 bits (19), Expect = 9e-04
Identities = 37/43 (86%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccgg 43
||||||||||| | |||||||| | || |||| ||||||||||
Sbjct: 75 ttattaaaccctgcccggcccgaccggccgacccgggacccgg 33
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 1 ttattaaacccggaccggcccgg 23
||||||||||||| |||||||||
Sbjct: 68 ttattaaacccggcccggcccgg 46
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 26 ggtcgactcgggacccggccgacccgg 52
|||||||||||||||||| | ||||||
Sbjct: 124 ggtcgactcgggacccggtcaacccgg 98
