miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53719_ptc-miRf11897-akr:pmrd
Length = 119
Score = 145 bits (73), Expect = 7e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 106
Query: 61 gccgcaactgaac 73
|||||||||||||
Sbjct: 107 gccgcaactgaac 119
Score = 139 bits (70), Expect = 4e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 31 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 60
Query: 91 tattcgctgc 100
||||||||||
Sbjct: 61 tattcgctgc 70
>54325_ptc-miRf12503-akr:pmrd
Length = 119
Score = 139 bits (70), Expect = 4e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 31 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 60
Query: 91 tattcgctgc 100
||||||||||
Sbjct: 61 tattcgctgc 70
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 106
Query: 61 gccgcaactgaac 73
| |||| ||||||
Sbjct: 107 gacgcacctgaac 119
>54271_ptc-miRf12449-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcaacgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52621_ptc-miRf10799-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52611_ptc-miRf10789-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctactgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52552_ptc-miRf10730-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52445_ptc-miRf10623-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52308_ptc-miRf10486-akr:pmrd
Length = 110
Score = 135 bits (68), Expect = 7e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>54200_ptc-miRf12378-akr:pmrd
Length = 119
Score = 131 bits (66), Expect = 1e-31
Identities = 69/70 (98%)
Strand = Plus / Plus
Query: 31 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgatttaa 60
Query: 91 tattcgctgc 100
||||||||||
Sbjct: 61 tattcgctgc 70
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ctgcagcgatttaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 106
Query: 61 gccgcaactgaac 73
| |||||||||||
Sbjct: 107 gacgcaactgaac 119
>54263_ptc-miRf12441-akr:pmrd
Length = 119
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 ctgcagcgatttgatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 106
Query: 61 gccgcaactgaac 73
|||||||||||||
Sbjct: 107 gccgcaactgaac 119
Score = 123 bits (62), Expect = 3e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 31 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgatttga 60
Query: 91 tattcgctgc 100
||||||||||
Sbjct: 61 tattcgctgc 70
>53515_ptc-miRf11693-akr:pmrd
Length = 118
Score = 129 bits (65), Expect = 4e-31
Identities = 71/73 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 ctgcagcgatttgatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 105
Query: 61 gccgcaactgaac 73
|||||||||||||
Sbjct: 106 gccgcaactgaac 118
Score = 107 bits (54), Expect = 2e-24
Identities = 67/70 (95%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 31 gtgtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaa 90
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
Sbjct: 1 gtgtgttgcgcagcgaaattctgtttcgctgcc-caactgaacctgctgcagcgatttga 59
Query: 91 tattcgctgc 100
||||||||||
Sbjct: 60 tattcgctgc 69
>52623_ptc-miRf10801-akr:pmrd
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattgatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 115 bits (58), Expect = 6e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctcctgcagcgaattgatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52533_ptc-miRf10711-akr:pmrd
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattaatattcactgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 60
Query: 95 cgctgc 100
| ||||
Sbjct: 61 cactgc 66
>52406_ptc-miRf10584-akr:pmrd
Length = 110
Score = 127 bits (64), Expect = 2e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgaattgatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 107 bits (54), Expect = 2e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
|||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctttttcgctgccgcaactgaacctcctgcagcgaattgatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52141_ptc-miRf10319-akr:pmrd
Length = 110
Score = 123 bits (62), Expect = 3e-29
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattgatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 43 ctgcagcgaattgatattcgctgccgatttgtgtgttgcgcagtgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
>52579_ptc-miRf10757-akr:pmrd
Length = 110
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 43 ctgcagcgatttaatattcgctgccgatttgtgtgttgcgcagcgaaattctgttttgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 115 bits (58), Expect = 6e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgtcgcaactgaacctgctgcagcgatttaatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52532_ptc-miRf10710-akr:pmrd
Length = 110
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgagttgatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 115 bits (58), Expect = 6e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgagttgatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>52354_ptc-miRf10532-akr:pmrd
Length = 110
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 43 ctgcagcgatttgatattcgctgccgaattgtgtgttgcgcagcgaaattctgtttcgct 102
Query: 61 gccgcaac 68
||||||||
Sbjct: 103 gccgcaac 110
Score = 99.6 bits (50), Expect = 4e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 35 gttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatatt 94
||||||||||||||||||||||||||| ||||||||||||| ||||||||| || |||||
Sbjct: 1 gttgcgcagcgaaattctgtttcgctgacgcaactgaacctcctgcagcgatttgatatt 60
Query: 95 cgctgc 100
||||||
Sbjct: 61 cgctgc 66
>54315_ptc-miRf12493-akr:pmrd
Length = 83
Score = 85.7 bits (43), Expect = 6e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||| |||||||||||| |||||||||| ||||||||||| || ||||||
Sbjct: 11 ctgcagcgaattagcattcgctgccgaattgtgtgttgtgcagcgaaattgtgattcgct 70
Query: 61 gccgcaactga 71
|||| ||||||
Sbjct: 71 gccgaaactga 81
>54011_ptc-miRf12189-akr:pmrd
Length = 158
Score = 71.9 bits (36), Expect = 9e-14
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||| |||||||| ||| |||||||||| ||||||||| | || ||||||
Sbjct: 11 ctgcagcgaattagcattcgctgtcgaattgtgtgttgtgcagcgaaactgtgattcgct 70
Query: 61 gccgcaactgaacctgctgcagcgaattaatattcgctgc 100
|||| ||||| | |||||||| ||||| |||||||||
Sbjct: 71 gccgaaactgcgtcggctgcagcaaattagcattcgctgc 110
>53975_ptc-miRf12153-akr:pmrd
Length = 75
Score = 69.9 bits (35), Expect = 3e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 gcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 62
||||||||||| |||||||||||| ||||||||| ||||||||||| || ||||||||
Sbjct: 9 gcagcgaattagcattcgctgccgaattgtgtgttctgcagcgaaattgtgattcgctgc 68
Query: 63 cgcaact 69
|| ||||
Sbjct: 69 cgaaact 75
>54190_ptc-miRf12368-akr:pmrd
Length = 143
Score = 63.9 bits (32), Expect = 2e-11
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
||||||||||||| |||||||||||| ||||||||| |||||||| || || ||||||
Sbjct: 123 ctgcagcgaattagcattcgctgccgaattgtgtgttctgcagcgaagttgtgattcgct 64
Query: 61 gccg 64
||||
Sbjct: 63 gccg 60
>52150_ptc-miRf10328-akr:pmrd
Length = 99
Score = 61.9 bits (31), Expect = 8e-11
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 16 attcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 62
|||||||||||| |||||||||| ||||||||| |||| ||||||||
Sbjct: 53 attcgctgccgaattgtgtgttgtgcagcgaaactctgattcgctgc 99
>54055_ptc-miRf12233-akr:pmrd
Length = 113
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 33 gtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaata 92
|||||| ||||||||| |||| |||||||||| ||||| | |||||||||||||| |
Sbjct: 1 gtgttgtgcagcgaaactctgattcgctgccgaaactgtgtcagctgcagcgaattagca 60
Query: 93 ttcgctgc 100
||||||||
Sbjct: 61 ttcgctgc 68
>52355_ptc-miRf10533-akr:pmrd
Length = 112
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 33 gtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaata 92
|||||| ||||||||| |||| ||| |||||| |||||| || ||||||||||||| |
Sbjct: 1 gtgttgtgcagcgaaactctgattcactgccgaaactgagtcttctgcagcgaattagca 60
Query: 93 ttcgctgc 100
||||||||
Sbjct: 61 ttcgctgc 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 55 ttcgctgccgcaactgaacctgctgcagcgaattaatattcgctgc 100
|||||||||| |||||| || ||||||||||||| |||||||||
Sbjct: 61 ttcgctgccgaaactgagtcttctgcagcgaattagcattcgctgc 106
>54142_ptc-miRf12320-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 gcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgctgc 62
||||||||||| |||||||||| | ||||||||| |||||||| || || ||||||||
Sbjct: 9 gcagcgaattagcattcgctgccaaattgtgtgttctgcagcgaatttgtgattcgctgc 68
Query: 63 c 63
|
Sbjct: 69 c 69
>52207_ptc-miRf10385-akr:pmrd
Length = 112
Score = 48.1 bits (24), Expect = 1e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 33 gtgttgcgcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaata 92
|||||| ||||||||| |||| ||| |||||| ||||| | |||||||||||||| |
Sbjct: 1 gtgttgtgcagcgaaactctgattcactgccgaaactgtgtcagctgcagcgaattagca 60
Query: 93 ttcgctgc 100
||||||||
Sbjct: 61 ttcgctgc 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 55 ttcgctgccgcaactgaacctgctgcagcgaattaatattcgctgc 100
|||||||||| |||||| || ||||||||||||| |||||||||
Sbjct: 61 ttcgctgccgaaactgagtcttctgcagcgaattagcattcgctgc 106
>52564_ptc-miRf10742-akr:pmrd
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaaattctgtttcgct 60
|||||| ||||||| | ||| |||||| ||| |||| ||||||||||| || ||||||
Sbjct: 4 ctgcagtgaattaacagtcgttgccgaattggatgttcagcagcgaaattgtgattcgct 63
Query: 61 gccgcaactga 71
|||| ||||||
Sbjct: 64 gccgaaactga 74
>54030_ptc-miRf12208-akr:pmrd
Length = 79
Score = 44.1 bits (22), Expect = 2e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 2 tgcagcgaattaatattcgctgccgatttgtgtgttgcgcagcgaa 47
|||||||||||| ||||||||| || ||||||||| ||||||||
Sbjct: 10 tgcagcgaattagcattcgctgctgaattgtgtgttctgcagcgaa 55
>53970_ptc-miRf12148-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 40 gcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatattcg 96
||||||||||| || |||||||||| ||||| | ||||||| ||||||| |||||
Sbjct: 6 gcagcgaaattgtgattcgctgccgaaactgtgtcggctgcagtgaattaacattcg 62
>53387_ptc-miRf11565-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 40 gcagcgaaattctgtttcgctgccgcaactgaacctgctgcagcgaattaatattcg 96
||||||||||| || |||||||||| ||||| | ||||||| ||||||| |||||
Sbjct: 6 gcagcgaaattgtgattcgctgccgaaactgtgtcggctgcagtgaattaacattcg 62
>54063_ptc-miRf12241-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1 ctgcagcgaattaatattcgctgccgatttgtgtgt 36
||||||||||| | | ||||||||||| ||||||||
Sbjct: 66 ctgcagcgaatgagttttcgctgccgaattgtgtgt 31
>52175_ptc-miRf10353-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tgcagcgaattaatattcgctgcc 25
||||||||||||| ||||||||||
Sbjct: 80 tgcagcgaattaacattcgctgcc 103
>52174_ptc-miRf10352-akr:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 tgcagcgaattaatattcgctgcc 25
||||||||||||| ||||||||||
Sbjct: 80 tgcagcgaattaacattcgctgcc 103
