miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52877_ptc-miRf11055-akr:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 1e-07
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 74 tttggacagcttgtgtgacccactccattcaccgttggtaaccttccttagtgt 127
||||||| |||||||||||||| ||| |||||||| || |||| |||||||||
Sbjct: 81 tttggacggcttgtgtgacccaatccggtcaccgttcgtgacctaccttagtgt 134
>51940_ptc-miRf10118-akr:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 1e-07
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 49 cccaaaggcaagtg-gtcttgacacctttggacagcttgtgtgacccactccattcaccg 107
|||||||||||||| |||| ||||||||| |||||| ||||| ||||||| ||||| ||
Sbjct: 31 cccaaaggcaagtgagtctcaacacctttgaacagctcgtgtggcccactctattcatcg 90
Query: 108 tt 109
||
Sbjct: 91 tt 92
