miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 149 bits (75), Expect = 4e-37
Identities = 93/99 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataac 99
|||||||||| || ||||||||||||||||||||||||
Sbjct: 61 tcgacggactcaccaacggatcacgtccgtcggtataac 99
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 141 bits (71), Expect = 1e-34
Identities = 92/99 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcattgaaatccgtcggtaaaaacaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataac 99
|||||| | | |||||||||||||||||||||||||||
Sbjct: 61 ccgacgaaattaccgacggatcacgtccgtcggtataac 99
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 99 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 40
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataac 99
||||||||||| |||||||| | ||||||||||||||
Sbjct: 39 ccgacggactcaccgacggaaccattccgtcggtataac 1
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataac 99
||||||||||| |||||||| | ||||||||||||||
Sbjct: 61 ccgacggactcaccgacggaaccattccgtcggtataac 99
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| |||
Sbjct: 1 gttttaccgacggactcattctgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataac 99
||||||||||| ||||| || || |||||||||||||||
Sbjct: 61 ccgacggactcaccgacagaacatgtccgtcggtataac 99
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggactcgccgacgga 80
||||||||||| ||||||||
Sbjct: 39 ccgacggactcaccgacgga 20
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggactcgccgacgga 80
||||||||||| ||||||||
Sbjct: 39 ccgacggactcaccgacgga 20
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 125 bits (63), Expect = 6e-30
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggta 95
|||||||| || ||||||||||||||| |||||||
Sbjct: 61 ccgacggattcaccgacggatcacgtcggtcggta 95
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 125 bits (63), Expect = 6e-30
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggta 95
|||||||| || ||||||||||||||| |||||||
Sbjct: 61 ccgacggattcaccgacggatcacgtcggtcggta 95
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 123 bits (62), Expect = 3e-29
Identities = 89/98 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| | |||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 1 gttttaccgacggaatcattccgtcggtgacagtaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
|| ||||| || |||||||| | |||||||||||||||
Sbjct: 61 ccaacggaatcaccgacggaacccgtccgtcggtataa 98
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggactcgccgacgga 80
||||||||||| ||||||||
Sbjct: 39 ccgacggactcaccgacgga 20
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 117 bits (59), Expect = 2e-27
Identities = 86/95 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgcaatccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggta 95
| || |||||| | |||||| ||||||||||||||
Sbjct: 61 cagatggactcactgacggaacacgtccgtcggta 95
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 113 bits (57), Expect = 2e-26
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||
Sbjct: 2 gttttaccgacggactaattccgtcggtgacaggaatgaaatccgtcggtgaaatcatta 61
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtata 97
||||||| ||| |||||| | |||||||||||||||
Sbjct: 62 ccgacggcctcaccgacgaaatacgtccgtcggtata 98
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 113 bits (57), Expect = 2e-26
Identities = 87/97 (89%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtata 97
||||||| || | |||||| ||||| ||||||||||
Sbjct: 61 ccgacggcatcacagacggaacacgttcgtcggtata 97
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 113 bits (57), Expect = 2e-26
Identities = 87/97 (89%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 101 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 42
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtata 97
||||||| || | |||||| ||||| ||||||||||
Sbjct: 41 ccgacggcatcacagacggaacacgttcgtcggtata 5
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 41 ccgacggcttcaccgacgga 22
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgttggtgaaaacaata 40
Query: 61 ccgacggactcgccgacgga 80
||||| ||||| ||||||||
Sbjct: 39 ccgacagactcaccgacgga 20
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 41 ccgacggcttcaccgacgga 22
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 61 ccgacggcttcaccgacgga 80
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 111 bits (56), Expect = 1e-25
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 61 ccgacggcttcaccgacgga 80
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 1 gttttaccgacggactcattccgtcggtgacagcaatgacatccgtcggtgaaaataata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 111 bits (56), Expect = 1e-25
Identities = 65/68 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 3 tttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataatacc 62
|||||||||||||||||||||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacaacaatgaaatccgtcggtgaaataattacc 40
Query: 63 gacggactcgccgacggatcacgtccgtcggtata 97
||||| ||| || ||||| |||||| |||||||||
Sbjct: 39 gacggcctcacctacggaacacgtctgtcggtata 5
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 107 bits (54), Expect = 1e-24
Identities = 87/98 (88%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| | ||
Sbjct: 103 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 44
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
|| |||| ||| | |||||| |||||||||||||||||
Sbjct: 43 ccaacggcctcactgacggaacacgtccgtcggtataa 6
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 107 bits (54), Expect = 1e-24
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||| |||||||||||||||||||||||||| |||||| ||||||||| ||| | ||
Sbjct: 1 gttttatcgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
||||||| ||| ||||||| |||||||||||||||||
Sbjct: 61 ccgacggcctcatcgacggaacacgtccgtcggtataa 98
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 107 bits (54), Expect = 1e-24
Identities = 87/98 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 63
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
|| |||| ||| | |||||| |||||||||||||||||
Sbjct: 64 ccaacggcctcactgacggaacacgtccgtcggtataa 101
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 105 bits (53), Expect = 6e-24
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 4 ttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataataccg 63
||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 93 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 34
Query: 64 acggactcgccgacgga 80
|||| || ||||||||
Sbjct: 33 acggcttcaccgacgga 17
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 105 bits (53), Expect = 6e-24
Identities = 86/97 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||| |||||||||||||||||| || |||||||||||||||| ||| | ||
Sbjct: 1 gttttaccgacagactaattccgtcggtgataggaatgaaatccgtcggtgaaataatta 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtata 97
||||||| ||| ||||||| ||||||||||||||||
Sbjct: 61 ccgacggcctcatcgacggaacacgtccgtcggtata 97
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||| ||||
Sbjct: 101 gttttaccgacggattaattccatcggtgaaagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataataccga 64
|||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| |||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cggactcgccgacgga 80
||||||| ||||||||
Sbjct: 31 cggactcaccgacgga 16
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||| |||||| |||||||||||||||||||||||||||| |||||| |||| ||||
Sbjct: 101 gttttactgacggattaattccgtcggtgacagcaatgaaatctgtcggtgaaaacaata 42
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 103 bits (52), Expect = 2e-23
Identities = 73/80 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||
Sbjct: 102 gttttaccgacggattaattccgtcggtgacaacaattaaatccgtcggtgaaaacaata 43
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 42 ccgacggattcaccgacgga 23
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 103 bits (52), Expect = 2e-23
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataataccga 64
|||||||||||| ||||||||||||| ||||||| ||||||||||| ||||| |||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cggactcgccgacgga 80
||||||| ||||||||
Sbjct: 31 cggactcaccgacgga 16
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
Query: 61 ccgacgga 68
||||||||
Sbjct: 61 ccgacgga 68
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 95.6 bits (48), Expect = 6e-21
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 8 cgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataataccgacgg 67
|||||||||||||||||||||||||| |||||| ||||||||| ||| | |||||||||
Sbjct: 4 cgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacgg 63
Query: 68 actcgccgacggatcacgtccgtcggta 95
||| ||||||| ||||||||||||||
Sbjct: 64 cctcatcgacggaacacgtccgtcggta 91
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 87.7 bits (44), Expect = 1e-18
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||| ||||| |||||||||| |||||| ||||||||| ||| ||
Sbjct: 4 gttttaccgacggactcattccatcggtgacaggaatgaactccgtcggtgaaatattta 63
Query: 61 ccgacggactcgccgacggatcacgtccgtcg 92
||||||| ||| |||||||| |||||||||||
Sbjct: 64 ccgacggcctcaccgacggaacacgtccgtcg 95
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 87.7 bits (44), Expect = 1e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||||||||||||||||| || |||| ||||||||||||| || ||
Sbjct: 3 gttttaccgacggactaattccgtcggtgaaaggcatgacctccgtcggtaaaattatta 62
Query: 61 ccgacggactcgccgacgga 80
||||||| ||| ||||||||
Sbjct: 63 ccgacggtctcaccgacgga 82
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 87.7 bits (44), Expect = 1e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||
Sbjct: 98 gttttaccgacggattaattccgt-ggtgacagcaatgaaatccgtcggtgaaaaccata 40
Query: 61 ccgacggactcgccgacgga 80
||||| || || ||||||||
Sbjct: 39 ccgacagaatcaccgacgga 20
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ccgacggatcacgtccgtcggt 94
||||||||||||||||||||||
Sbjct: 7 ccgacggatcacgtccgtcggt 28
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||||||| ||||||| |||||| ||| ||||| ||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
|||| || || |||||||| |||||||||| ||||||
Sbjct: 64 ccgatggcttcaccgacggaacacgtccgtcagtataa 101
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 83.8 bits (42), Expect = 2e-17
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||||||||||||||| |||| | | |||||| ||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgcactttgtcggtgaaataatta 63
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
||||||| ||| || ||||| |||||| ||||||||||
Sbjct: 64 ccgacggcctcaccaacggaacacgtctgtcggtataa 101
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 81.8 bits (41), Expect = 9e-17
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||| ||||||||||||||| || ||| ||| ||||| ||| | ||
Sbjct: 2 gttttaccgacggactacttccgtcggtgacaggaacgaactccatcggtgaaataatta 61
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtata 97
||||||| ||| ||||| || || |||||||||||||
Sbjct: 62 ccgacggcctcaccgacagaacaagtccgtcggtata 98
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||| | ||||||||||||| |||||| || ||||||||| |||| ||||
Sbjct: 99 gttttaccgacgggttcattccgtcggtgatagcaattaactccgtcggtgaaaacaata 40
Query: 61 ccgacggactcgccgacgga 80
|||||||| || ||||||||
Sbjct: 39 ccgacggattcaccgacgga 20
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 73 ccgacggatcacgtccgtcggt 94
||||||||||||||||||||||
Sbjct: 7 ccgacggatcacgtccgtcggt 28
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||| ||||| ||| ||||||||||||||| ||| ||||
Sbjct: 1 gttttaccgacggattaattccgttggtgatagccatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 61 ccgacggcttcaccgacgga 80
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 71.9 bits (36), Expect = 8e-14
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||| ||||||||||||||| | ||||||||||||||| ||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgataaacatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacggactcgccgacgga 80
||||||| || ||||||||
Sbjct: 61 ccgacggcttcaccgacgga 80
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggt 50
|||||||||| |||||||||| ||||||||||| |||||| |||||||||
Sbjct: 1 gttttaccgatggactaattctgtcggtgacaggaatgaactccgtcggt 50
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||||||||||||| ||||||||||||| || ||| || || |||||| ||| | ||
Sbjct: 1 gttttaccgacggactcattccgtcggtgatagaaatcaactctgtcggtgaaataatta 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
|||| || ||| |||||||| || |||||||||||||
Sbjct: 61 ccgatggcctcaccgacggaacatatccgtcggtataa 98
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 3 tttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataatacc 62
|||||||||| ||||||||||||||| ||| ||||||||||||||| ||| ||||||
Sbjct: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
Query: 63 gacggactcgccgacgga 80
||||| || ||||||||
Sbjct: 61 gacggcttcaccgacgga 78
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
||||||||||||||||||||| |||||| |||| ||||| ||||||||| ||| || |
Sbjct: 1 gttttaccgacggactaattctgtcggtaacaggcatgaactccgtcggtgaaattattc 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcggtataa 98
||||||| ||| | |||||| | | ||||||||||||
Sbjct: 61 ccgacggtctcactgacggaataagaccgtcggtataa 98
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 61.9 bits (31), Expect = 8e-11
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2 ttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaa 52
||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 99 ttttaccgacggattaattccgtcggtgtaaggcatgaaatccgtcggtaa 49
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 2 ttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataatac 61
|||||||||||||||||||| |||||||| || ||||| ||||| || ||| || | |
Sbjct: 5 ttttaccgacggactaattctgtcggtgataggcatgaactccgttggagaaattattcc 64
Query: 62 cgacggactcgccgacggatcacgtccgtcggtataa 98
|||||| || ||||||| ||||||||||||||||
Sbjct: 65 cgacggtttcatcgacggaatacgtccgtcggtataa 101
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
||||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
||||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
||||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| ||||||||||||||
Sbjct: 2 gttttaccgacggattaattccgtcggtg 30
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 taccgacggactaattccgtcggt 28
||||||||||||||||||||||||
Sbjct: 75 taccgacggactaattccgtcggt 98
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggactaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 76 taccgacggaataattccgtcggtga 101
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggactaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 81 taccgacggaataattccgtcggtga 106
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggtg 29
|||||||||| ||||||||||||||
Sbjct: 25 taccgacggaataattccgtcggtg 1
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ttaccgacggactaattccgtcggt 28
||||||||||| |||||||||||||
Sbjct: 78 ttaccgacggaataattccgtcggt 102
>52674_ptc-miRf10852-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 3 gttttaccgacggaaaaattccgtcggtg 31
>52595_ptc-miRf10773-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 75/93 (80%)
Strand = Plus / Plus
Query: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
|||||| ||||||| |||||| ||||||| || || ||| ||||||| || | | ||
Sbjct: 1 gttttatcgacggattaattctgtcggtgtgagacataaaaaccgtcggcaatactttta 60
Query: 61 ccgacggactcgccgacggatcacgtccgtcgg 93
|||||||| ||||||||||| | |||||||||
Sbjct: 61 ccgacggattcgccgacggaataagtccgtcgg 93
>52442_ptc-miRf10620-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaacaattccgtcggtg 72
>52251_ptc-miRf10429-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 102 gttttaccgacggaaaaattccgtcggtg 74
>52163_ptc-miRf10341-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
||||||||||||||| ||||||||||||
Sbjct: 100 gttttaccgacggacatattccgtcggtg 72
>52092_ptc-miRf10270-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>51874_ptc-miRf10052-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggactaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>53599_ptc-miRf11777-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggt 28
|||||||||||| |||||||||||
Sbjct: 32 taccgacggacttattccgtcggt 9
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggactaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>53006_ptc-miRf11184-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 ccgacggactaattccgtcggtga 30
|||||||||| |||||||||||||
Sbjct: 8 ccgacggacttattccgtcggtga 31
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggactaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggactaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
>51978_ptc-miRf10156-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 ccgacggactaattccgtcggtga 30
|||||||||| |||||||||||||
Sbjct: 8 ccgacggacttattccgtcggtga 31
