miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>52332_ptc-miRf10510-akr:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 1e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 50  ccaagtctcttgggtctggcgg 71
           ||||||||||||||||||||||
Sbjct: 79  ccaagtctcttgggtctggcgg 100





>52261_ptc-miRf10439-akr:pmrd
          Length = 99

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 47 gatccaagtctcttgggtct 66
          ||||||||||||||||||||
Sbjct: 78 gatccaagtctcttgggtct 97





>52851_ptc-miRf11029-akr:pmrd
          Length = 122

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 48 atccaagtctcttgggtct 66
          |||||||||||||||||||
Sbjct: 9  atccaagtctcttgggtct 27





>52603_ptc-miRf10781-akr:pmrd
          Length = 155

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 50 ccaagtctcttgggtctgg 68
          |||||||||||||||||||
Sbjct: 20 ccaagtctcttgggtctgg 2