miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 89.7 bits (45), Expect = 2e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 5 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgagt 64
Query: 61 ttaataacagtgc 73
|||||||||||||
Sbjct: 65 ttaataacagtgc 77
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 89.7 bits (45), Expect = 2e-19
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccgggt 61
Query: 61 ttaataacagtgc 73
|||||||||||||
Sbjct: 62 ttaataacagtgc 74
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc--ctggg--ccgggccgggccg 57
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcca 61
Query: 58 ggtttaataacagt 71
||||||||||||||
Sbjct: 62 ggtttaataacagt 75
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc--ctggg--ccgggccgggccg 57
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 77 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcca 18
Query: 58 ggtttaataacagt 71
||||||||||||||
Sbjct: 17 ggtttaataacagt 4
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggt 61
Query: 61 ttaataac 68
||||||||
Sbjct: 62 ttaataac 69
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 87.7 bits (44), Expect = 1e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcctgggccgggccggg 54
|||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtcctgggccgggccggg 48
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 4/74 (5%)
Strand = Plus / Minus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc--ctggg--ccgggccgggccg 57
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 84 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcca 25
Query: 58 ggtttaataacagt 71
||||||||||||||
Sbjct: 24 ggtttaataacagt 11
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 85.7 bits (43), Expect = 4e-18
Identities = 69/76 (90%), Gaps = 5/76 (6%)
Strand = Plus / Minus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggt---cctgggccgggccgggccgg 58
||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 74 gtcttttattaaacccggaccggtccagccaccgggtcgacct--gctgggccgggccgg 17
Query: 59 gtttaataacagtgct 74
||||||||||| ||||
Sbjct: 16 gtttaataacactgct 1
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 85.7 bits (43), Expect = 4e-18
Identities = 62/66 (93%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtc--ctgggccgggccgggccgggtt 61
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgact-tgccgggccgggccgggtt 10
Query: 62 taataa 67
||||||
Sbjct: 9 taataa 4
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
|||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 3 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccggaccgggccgagt 62
Query: 61 ttaataacagtgct 74
||||||||||||||
Sbjct: 63 ttaataacagtgct 76
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 81.8 bits (41), Expect = 6e-17
Identities = 64/70 (91%), Gaps = 5/70 (7%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggt---cctgggccgggccgggccgggt 60
||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacct--gccgggccgggccgggt 11
Query: 61 ttaataacag 70
||||||||||
Sbjct: 10 ttaataacag 1
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 77.8 bits (39), Expect = 9e-16
Identities = 59/64 (92%), Gaps = 5/64 (7%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggt---cctgggccgggccgggccgggttta 63
|||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcaacct--gccgggccgggccgggttta 58
Query: 64 ataa 67
||||
Sbjct: 59 ataa 62
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 77.8 bits (39), Expect = 9e-16
Identities = 69/80 (86%), Gaps = 8/80 (10%)
Strand = Plus / Minus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcctggg--------ccgggccgg 53
||||||||||||||||||||||||||||||||| ||||| ||| || ||||||
Sbjct: 80 gtcttttattaaacccggaccggtccagccaccaggtcccgggtcgacccaccaggccgg 21
Query: 54 gccgggtttaataacagtgc 73
||||||||||||||||||||
Sbjct: 20 gccgggtttaataacagtgc 1
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccaccgggtc 42
Score = 44.1 bits (22), Expect = 1e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataacagtgc 73
|||||||||| || ||||||||||||||||
Sbjct: 64 gccgggccggaccaggtttaataacagtgc 93
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 61 gccgggccgggccgggtttaataa 84
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccaccgggtc 42
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataac 68
|||||||||||||||||||||||||
Sbjct: 64 gccgggccgggccgggtttaataac 88
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 75.8 bits (38), Expect = 4e-15
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggtttaat 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 66 aa 67
||
Sbjct: 61 aa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 75.8 bits (38), Expect = 4e-15
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggtttaat 65
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 66 aa 67
||
Sbjct: 61 aa 62
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccaccgggtc 42
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataac 68
||||||||||| |||||||||||||
Sbjct: 64 gccgggccgggtcgggtttaataac 88
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 gtcttttattaaacccggaccggtccagccaccgggtc 43
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataac 68
|||||||||| ||||||||||||||
Sbjct: 65 gccgggccggaccgggtttaataac 89
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtcc 40
||||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgggtcc 40
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 71.9 bits (36), Expect = 6e-14
Identities = 63/73 (86%), Gaps = 8/73 (10%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcctgg--------gccgggccgggc 55
||||||||||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgggtcccgggtcgacccgccgggccgggc 60
Query: 56 cgggtttaataac 68
|||||||||||||
Sbjct: 61 cgggtttaataac 73
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 71.9 bits (36), Expect = 6e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggttt 62
||||||||||||||||||||||| ||||||||| || |||||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
Query: 63 aataacag 70
||||||||
Sbjct: 61 aataacag 68
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 69.9 bits (35), Expect = 2e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggtttaataa 67
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaataa 62
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 agtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 agtcttttattaaacccggaccggtccagccactgggtc 42
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggt 38
|||||||||||||||||||||||||||||||||||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggt 50
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 48 ggccgggccgggtttaataacag 70
|||||||||||||||||||||||
Sbjct: 23 ggccgggccgggtttaataacag 1
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 67.9 bits (34), Expect = 9e-13
Identities = 64/75 (85%), Gaps = 8/75 (10%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcctgg--------gccgggccgggc 55
||||||||||||||||||||||| |||||||||||| ||| |||||||||| |
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtcttgggtcgacccgccgggccggac 60
Query: 56 cgggtttaataacag 70
|||||||||||||||
Sbjct: 61 cgggtttaataacag 75
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 67.9 bits (34), Expect = 9e-13
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 gtcttttgttaaacccggaccggtccagccaccgggtc 39
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataacagtgc 73
||||||||||||||||||||||||||||||
Sbjct: 61 gccgggccgggccgggtttaataacagtgc 90
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 67.9 bits (34), Expect = 9e-13
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||| ||||||||||||||||||||||||||||||
Sbjct: 2 gtcttttgttaaacccggaccggtccagccaccgggtc 39
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataacagtg 72
|||||||| | ||||||||||||||||||
Sbjct: 61 gccgggccagaccgggtttaataacagtg 89
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 67.9 bits (34), Expect = 9e-13
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 6 tttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtc 42
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 55 gccgggccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 55 gccgggccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 55 gccgggccgggccgggtttaataa 78
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
|||||||||||||| |||||||||
Sbjct: 55 gccgggccgggccgagtttaataa 78
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgg 36
|||||||||||||||||||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtccagccaccgg 33
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataacag 70
|||||||||||||||||||||||||||
Sbjct: 58 gccgggccgggccgggtttaataacag 84
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/71 (88%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtc--ctggg--ccgggccgggccggg 59
||||||||||||||||||||||| ||| ||||| || | ||| |||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccgggccgggccggg 60
Query: 60 tttaataacag 70
|||||||||||
Sbjct: 61 tttaataacag 71
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 55 gccgggccgggccgggtttaataa 78
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgg 36
|||||||||||||||||||||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccgg 40
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtcc 40
||||| ||||||||||||||||||||||||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgggtcc 40
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 3 tcttttattaaacccggaccggtccagccaccgggt 38
||||||||||||||| ||||||||||||||||||||
Sbjct: 63 tcttttattaaacccagaccggtccagccaccgggt 98
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgg 36
|||||||| ||||||||||||||||||||||||||
Sbjct: 2 gtcttttagtaaacccggaccggtccagccaccgg 36
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtc 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||| ||||||||||||||||
Sbjct: 55 gccgggctgggccgggtttaataa 78
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgg 36
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtc 33
Score = 48.1 bits (24), Expect = 8e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
||||||||||||||||||||||||
Sbjct: 55 gccgggccgggccgggtttaataa 78
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
|||||||| ||||||| |||||||||||||||||||||
Sbjct: 69 gtcttttaataaacccagaccggtccagccaccgggtc 106
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||||||| |||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtc 33
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataa 67
|||||||||| |||||||||||||
Sbjct: 55 gccgggccggaccgggtttaataa 78
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 58.0 bits (29), Expect = 9e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 taaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtc 39
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||| ||||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtc 46
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 44 gccgggccgggccgggtttaataacag 70
|||||||||||||||||||||||||||
Sbjct: 27 gccgggccgggccgggtttaataacag 1
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 5e-08
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||| ||||||| ||||||||
Sbjct: 3 gtcttttattaaacccggacc-gtccagcgaccgggtc 39
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 44 gccgggccgggccgggtttaataac 68
|||||||||||||||||||||||||
Sbjct: 61 gccgggccgggccgggtttaataac 85
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 48.1 bits (24), Expect = 8e-07
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 12 aaacccggaccggtccagccaccgggtc 39
|||||||||| |||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtc 15
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 1e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtc 39
|||||||| |||| |||||||||||||||| ||||||
Sbjct: 1 gtcttttaacaaactcggaccggtccagccatcgggtc 38
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 acccggaccggtccagccaccg 35
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggaccggtccagccaccgggt 38
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 tcttttattaaacccggaccggtccagccaccg 35
||||||| ||||| || ||||||||||||||||
Sbjct: 63 tcttttaataaactcgaaccggtccagccaccg 31
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 2 gtcttttattaaacccggaccggtccagccac 33
|||||||| ||||||| ||||||||||||||
Sbjct: 92 gtcttttaacaaacccgaaccggtccagccac 61
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 12 aaacccggaccggtccagccaccgggtc 39
||||||| |||||||||||| |||||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtc 99
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 gccgggccgggccgggtttaataa 67
|||||||||| |||||||||||||
Sbjct: 24 gccgggccggtccgggtttaataa 1
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 16 ccggaccggtccagccaccgggtc 39
||||||||||||||||||| ||||
Sbjct: 46 ccggaccggtccagccaccaggtc 23
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 5 ttttattaaacccggaccggtcc 27
||||| |||||||||||||||||
Sbjct: 81 ttttagtaaacccggaccggtcc 59
