miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 153 bits (77), Expect = 3e-38
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 ttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 103
Query: 71 ttgaaaagtggtttctcggaaagcgaattccggaaaa 107
||| |||||||||||| |||||| ||||||| |||||
Sbjct: 104 ttggaaagtggtttcttggaaagtgaattcccgaaaa 140
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 151 bits (76), Expect = 1e-37
Identities = 100/108 (92%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 44 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcagacaaacaca 103
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccggaaaacaaa 111
|||||||||| ||||||| ||| ||||||| ||||||||| |||||||
Sbjct: 104 ggaaagtttggaaagtggcttcccggaaagtgaattccgggaaacaaa 151
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 139 bits (70), Expect = 5e-34
Identities = 103/114 (90%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaac 60
||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 1 gtgtttttcgttgaccggaaagtgttttccgttgaccacctttcctaatggcaaacaaac 60
Query: 61 acaggaaagtttgaaaagtggtttctcggaaagcgaattccggaaaacaaacat 114
||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 61 acaggaaagtttggaaagtggtttccgggaaactactttccggaaaacaaacat 114
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 137 bits (69), Expect = 2e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaac 60
|||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 53 gtgttttccgttgatcggaaagtgtttttcattgaccaacttttctaatggcaaacaaac 112
Query: 61 acaggaaagtttgaaaagtggtttc 85
||||||||||||| |||||||||||
Sbjct: 113 acaggaaagtttggaaagtggtttc 137
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttga 35
||||| |||||||||||||||||||
Sbjct: 42 ttgactggaaagtgttttccgttga 66
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 135 bits (68), Expect = 8e-33
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaa 96
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccgg 103
||||||||| ||||||||||| |||||| |||||||||
Sbjct: 97 agaaagtttggaaagtggtttcctggaaagtgaattccgg 136
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 135 bits (68), Expect = 8e-33
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaa 96
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccgg 103
||||||||| ||||||||||| |||||| |||||||||
Sbjct: 97 agaaagtttggaaagtggtttcctggaaagtgaattccgg 136
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 135 bits (68), Expect = 8e-33
Identities = 80/84 (95%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaac 60
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gtgtttttcgttgaccggaaagtgttttccgttgaccaactttcctaatggcaaacaaac 60
Query: 61 acaggaaagtttgaaaagtggttt 84
|||||||||||| ||||||||||
Sbjct: 61 acaggaaagtttagaaagtggttt 84
>52389_ptc-miRf10567-akr:pmrd
Length = 140
Score = 135 bits (68), Expect = 8e-33
Identities = 92/100 (92%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 37 ttttcctttgactggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaaa 96
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccgg 103
||||||||| ||||||||||| |||||| |||||||||
Sbjct: 97 agaaagtttggaaagtggtttcctggaaagtgaattccgg 136
>54345_ptc-miRf12523-akr:pmrd
Length = 231
Score = 133 bits (67), Expect = 3e-32
Identities = 100/111 (90%)
Strand = Plus / Minus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 115 ttttcctttgactggaaagtgttttccgttgaccaacttttcaaatgtcaaacaaacaca 56
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccggaaaacaaacat 114
|||||||||| ||| || |||| ||||||| |||||||| ||||||||||
Sbjct: 55 ggaaagtttggaaaatgatttcccggaaagtgaattccgagaaacaaacat 5
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 10 gttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaag 69
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gttgaccggaaagtgttttctgttgaccaactttcctaatggcaaacaaacacaggaaag 60
Query: 70 tttgaaaagtggtttctcggaaa 92
|||| ||||||||||| ||||||
Sbjct: 61 tttggaaagtggtttcccggaaa 83
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 131 bits (66), Expect = 1e-31
Identities = 90/98 (91%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct: 37 ttttcctttgactggaaagtgttttccgttgaccaactttcctagtggcaaataaacaca 96
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattcc 101
|||||||||| ||||||||||| ||||||| |||||||
Sbjct: 97 ggaaagtttggaaagtggtttcccggaaagtgaattcc 134
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 10 gttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaag 69
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaag 60
Query: 70 tttgaaaagtggtttc 85
|||| |||||||||||
Sbjct: 61 tttggaaagtggtttc 76
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 73/76 (96%)
Strand = Plus / Plus
Query: 10 gttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaag 69
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gttgaccggaaagtgttttctgttgaccaacttttctaatgacaaacaaacacaggaaag 60
Query: 70 tttgaaaagtggtttc 85
|||| |||||||||||
Sbjct: 61 tttggaaagtggtttc 76
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 125 bits (63), Expect = 7e-30
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 19 aaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaaag 78
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||
Sbjct: 46 aaagtgttttccgttgaccaacttttctagtggcaaataaacacaggaaagtttggaaag 105
Query: 79 tggtttctcggaaagcgaattcc 101
||||||| ||||||| |||||||
Sbjct: 106 tggtttcccggaaagtgaattcc 128
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 119 bits (60), Expect = 5e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 2 tgttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaaca 61
||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 2 tgttttctgttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaaca 61
Query: 62 caggaaagtttgaaaagtggtttc 85
|| |||||||| |||||||||||
Sbjct: 62 caagaaagtttagaaagtggtttc 85
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 111 bits (56), Expect = 1e-25
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| |||| |||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 38 ttttcctttgattggaaagtgttttccattgaccaactttcctaatgtcaaacaaacaca 97
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccggaaaa 107
||||| |||| ||||||||||| |||||| ||||||||||||
Sbjct: 98 ggaaaatttggaaagtggtttccaggaaagtaaattccggaaaa 141
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 17 ggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaa 76
||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 24 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 83
Query: 77 agtggtttctcggaaa 92
||||||||| ||||||
Sbjct: 84 agtggtttcccggaaa 99
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 10 gttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaag 69
|||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||
Sbjct: 2 gttgaccggaaagtgttttccgttgaccaattttcctaatggcaaacaaacacaagaaag 61
Query: 70 tttgaaaagtggtttc 85
||| |||||||||||
Sbjct: 62 tttagaaagtggtttc 77
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 111 bits (56), Expect = 1e-25
Identities = 71/76 (93%)
Strand = Plus / Minus
Query: 17 ggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaa 76
||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct: 92 ggaaagtgttttccgttgaccaactttcctcgtggcaaacaaacacaggaaagtttggaa 33
Query: 77 agtggtttctcggaaa 92
||||||||| ||||||
Sbjct: 32 agtggtttcccggaaa 17
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 109 bits (55), Expect = 4e-25
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| ||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 38 ttgactggaaagtatttttcgttgatcaacttttctaatagcaaacaaacacaggaaagt 97
Query: 71 ttgaaaagtggtttctcggaaag 93
||| ||||||||||| |||||||
Sbjct: 98 ttggaaagtggtttcccggaaag 120
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 109 bits (55), Expect = 4e-25
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 19 aaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaaag 78
|||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||
Sbjct: 90 aaagtgttttccgttgaccaacttttttaatggcaaacaaacatgggaaagtttggaaag 31
Query: 79 tggtttctcggaaag 93
||||||| |||||||
Sbjct: 30 tggtttcccggaaag 16
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 107 bits (54), Expect = 2e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| |||||||||||||||||||||| |||| |||||| |||||||| ||||||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccacctttcctaatgacaaacaaatacaggaaagt 60
Query: 71 ttgaaaagtggtttctcggaaa 92
||| ||||||||||| ||||||
Sbjct: 61 ttggaaagtggtttcccggaaa 82
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 107 bits (54), Expect = 2e-24
Identities = 75/82 (91%)
Strand = Plus / Plus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| ||||| ||||||||||| ||||||||||||||||||||| |||||||| |||
Sbjct: 30 ttttcctttgactagaaagtgtttttcgttgaccaacttttctaatgacaaacaaataca 89
Query: 64 ggaaagtttgaaaagtggtttc 85
|||||||||| |||||||||||
Sbjct: 90 ggaaagtttggaaagtggtttc 111
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 107 bits (54), Expect = 2e-24
Identities = 90/102 (88%)
Strand = Plus / Minus
Query: 4 ttttccgttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacaca 63
|||||| |||| |||||||||||||| |||||||||||| |||||| ||||||||||||
Sbjct: 102 ttttcctttgattggaaagtgttttccattgaccaactttcctaatgtcaaacaaacaca 43
Query: 64 ggaaagtttgaaaagtggtttctcggaaagcgaattccggaa 105
||||| |||| ||||||||||| |||||| ||||||||||
Sbjct: 42 ggaaaatttggaaagtggtttccaggaaagtaaattccggaa 1
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 105 bits (53), Expect = 7e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 25 ttttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaaagtggttt 84
|||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 31 tttttcgttgaccaacttttcttatggcaaacaaacacaggaaagtttggaaagtggttt 90
Query: 85 ctcggaaagcgaattcc 101
| || |||| |||||||
Sbjct: 91 cccgaaaagtgaattcc 107
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 99.6 bits (50), Expect = 4e-22
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||
Sbjct: 101 ttgactggaaagtgttttccgttgaccaactttcctaataacaaacaaacacatgaaagt 42
Query: 71 ttgaaaagtggttt 84
||| ||||||||||
Sbjct: 41 ttggaaagtggttt 28
>53306_ptc-miRf11484-akr:pmrd
Length = 96
Score = 97.6 bits (49), Expect = 2e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||
Sbjct: 1 ttgactggaaagtgttttccgttgaccaactttcctaaaggcaagcaaacacaggaaagt 60
Query: 71 ttgaaaagtggtt 83
||| || ||||||
Sbjct: 61 ttggaaggtggtt 73
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaa 48
|||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gtgttttctgttgaccggaaagtgttttccgttgaccaacttttctaa 149
>52002_ptc-miRf10180-akr:pmrd
Length = 115
Score = 87.7 bits (44), Expect = 2e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 26 tttccgttgaccaacttttctaatggcaaacaaacacaggaaagtttgaaaagtggtttc 85
|||| |||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 46 tttctgttgaccagctttcctaatggcaaacaaacataggaaagtttggaaagtggtttc 105
Query: 86 tcggaaag 93
|||||||
Sbjct: 106 ccggaaag 113
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 85.7 bits (43), Expect = 6e-18
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 11 ttgaccggaaagtgttttccgttgaccaacttttctaatggcaaacaaacacaggaaagt 70
||||| ||||| ||||||| |||||||||||||||||||| ||||||||| || ||||||
Sbjct: 101 ttgactggaaaatgttttctgttgaccaacttttctaatgacaaacaaacgcatgaaagt 42
Query: 71 ttgaaaagtggtttc 85
|| |||||||||||
Sbjct: 41 ttagaaagtggtttc 27
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 85.7 bits (43), Expect = 6e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 142
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 85.7 bits (43), Expect = 6e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 142
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaactt 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 gtgttttccgttgaccggaaagtgttttccgttgaccaactt 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 53 ttgactggaaagtgttttccgttgacc 27
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 81.8 bits (41), Expect = 1e-16
Identities = 48/49 (97%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttctaat 49
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 104 gtgttttccgttgaccggaaagtg-tttccgttgaccaacttttctaat 151
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 93 ttgactggaaagtgttttccgttgacc 119
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgtttttcgttgaccggaaagtgttttccgttgaccaacttt 142
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgtttttcgttgaccggaaagtgttttccgttgaccaacttt 142
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgaccaacttt 43
|||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tttccgttgaccggaaagtgttttccgttgaccaacttt 151
>52458_ptc-miRf10636-akr:pmrd
Length = 138
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 43 gtgtttttcgttgaccggaaagtgttttccgttgaccaacttt 1
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 5 tttccgttgaccggaaagtgttttccgttgacc 37
||||||||||| ||||||||||| ||||||||
Sbjct: 60 tttccgttgactagaaagtgtttttcgttgacc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Minus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgac 36
||||||||||||||| | |||||| |||||||||||
Sbjct: 84 gtgttttccgttgactgaaaagtg-tttccgttgac 50
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 17 ggaaagtgttttccgttgac 36
||||||||||||||||||||
Sbjct: 89 ggaaagtgttttccgttgac 70
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 77.8 bits (39), Expect = 2e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgtttttcgttgaccggaaagtgttttccgttgaccaacttt 142
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 73.8 bits (37), Expect = 2e-14
Identities = 44/45 (97%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttttc 45
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 100 gtgttttccgttgaccggaaagtg-tttccgttgaccaacttttc 143
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacca 38
||||||| ||||||||||||||||||||||||||||||
Sbjct: 94 gtgtttttcgttgaccggaaagtgttttccgttgacca 131
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacca 38
||||||| ||||||||||||||||||||||||||||||
Sbjct: 94 gtgtttttcgttgaccggaaagtgttttccgttgacca 131
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacca 38
||||||||||||||||||||||||||||||||||
Sbjct: 128 tttccgttgaccggaaagtgttttccgttgacca 161
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacc 37
||||||||||| |||||||||||||||||||||
Sbjct: 87 tttccgttgactggaaagtgttttccgttgacc 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacc 37
||||||||||||||||| ||||| ||||||||||||
Sbjct: 104 gtgttttccgttgaccgagaagtg-tttccgttgacc 139
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacca 38
||||||| ||||||||||||||||||||||||||||||
Sbjct: 94 gtgtttttcgttgaccggaaagtgttttccgttgacca 131
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacca 38
||||||||||||||||||||||||||||||||||
Sbjct: 118 tttccgttgaccggaaagtgttttccgttgacca 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 35/37 (94%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacc 37
||||||||||||||||| |||||| ||||||||||||
Sbjct: 94 gtgttttccgttgaccgaaaagtg-tttccgttgacc 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 83 ttgactggaaagtgttttccgttgacc 109
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacc 37
|||||||||||||||||||||||||||||||||
Sbjct: 87 tttccgttgaccggaaagtgttttccgttgacc 119
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 61.9 bits (31), Expect = 9e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| | |||||||||||||||||||||||||||| ||||
Sbjct: 122 gtgtttttctttgaccggaaagtgttttccgttgaccaccttt 164
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgacc 37
|||||||||||| ||| ||||||||||| | ||||||
Sbjct: 101 gtgttttccgttaaccagaaagtgtttttctttgacc 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacca 38
||||| ||||||||||||||||| ||||
Sbjct: 90 ttgactggaaagtgttttccgttaacca 117
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 9 cgttgaccggaaagtgttttccgttgaccaacttt 43
||||||| |||||||||||||||||||||||||||
Sbjct: 128 cgttgactggaaagtgttttccgttgaccaacttt 162
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttc 29
||||||||||||||||||||||| |||||
Sbjct: 100 gtgttttccgttgaccggaaagtattttc 128
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttgacc 37
||||| |||||||||||||||||||||
Sbjct: 89 ttgactggaaagtgttttccgttgacc 115
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttga 35
||||||| |||||||||||||||||||||||||||
Sbjct: 95 gtgtttttcgttgaccggaaagtgttttccgttga 129
>54023_ptc-miRf12201-akr:pmrd
Length = 66
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttga 35
||||||||||| |||||||||||||||||||
Sbjct: 36 tttccgttgactggaaagtgttttccgttga 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 3 gttttccgttgaccggaaagtgttttccgttgac 36
||||||||||||||| |||||| |||||||||||
Sbjct: 14 gttttccgttgaccgaaaagtg-tttccgttgac 46
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 52.0 bits (26), Expect = 9e-08
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 1 gtgttttccgttgaccggaaagtgttttccgttgaccaactt 42
|||||||| |||||||||||||| |||||||||||||||||
Sbjct: 44 gtgttttctgttgaccggaaagt-atttccgttgaccaactt 4
>53267_ptc-miRf11445-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacc 37
||||||||||| ||||| |||||||||||||||
Sbjct: 40 tttccgttgactggaaaatgttttccgttgacc 72
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 7 tccgttgaccggaaagtgttttccgttgacc 37
||||||||| ||||| |||||||||||||||
Sbjct: 1 tccgttgactggaaaatgttttccgttgacc 31
Score = 46.1 bits (23), Expect = 6e-06
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 2 tgttttccgttgaccggaaagtgttttccgttgac 36
|||||||||||||||| |||||| |||||||||||
Sbjct: 17 tgttttccgttgaccgaaaagtg-tttccgttgac 50
>53581_ptc-miRf11759-akr:pmrd
Length = 75
Score = 46.1 bits (23), Expect = 6e-06
Identities = 33/35 (94%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 2 tgttttccgttgaccggaaagtgttttccgttgac 36
|||||||||||||||| |||||| |||||||||||
Sbjct: 17 tgttttccgttgaccgaaaagtg-tttccgttgac 50
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 9 cgttgaccggaaagtgttttccgttgacc 37
||||||| ||||| |||||||||||||||
Sbjct: 3 cgttgactggaaaatgttttccgttgacc 31
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 5 tttccgttgaccggaaagtgttttccgttgacc 37
||||||||||| ||||| |||||| ||||||||
Sbjct: 40 tttccgttgactggaaaatgtttttcgttgacc 72
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 ttgaccggaaagtgttttccgttga 35
||||| |||||||||||||||||||
Sbjct: 12 ttgactggaaagtgttttccgttga 36
