miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggtcaac 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ccgacggcttcaccgacggaagtgctccgtcggtcaac 4
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggtcaac 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 41 ccgacggcttcaccgacggaagtgctccgtcggtcaac 4
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggtcaac 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaagtgctccgtcggtcaac 98
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 172 bits (87), Expect = 3e-44
Identities = 90/91 (98%)
Strand = Plus / Minus
Query: 4 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccg 34
Query: 64 acggcttcaccgacggaagtgctccgtcggt 94
||||||||||||||||||||| |||||||||
Sbjct: 33 acggcttcaccgacggaagtgatccgtcggt 3
>54335_ptc-miRf12513-akr:pmrd
Length = 99
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| ||||||||||||||| |||||||||
Sbjct: 39 ccgacggactcaccgacggaagtgatccgtcggt 6
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 101 gttttaccgacggattaattccatcggtgaaagcaatgaaatccgtcggtgaaaacaata 42
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| ||||||||||||||||||||||||||
Sbjct: 41 ccgacggattcaccgacggaagtgctccgtcggt 8
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| ||||||||||||||| |||||||||
Sbjct: 39 ccgacggactcaccgacggaagtgatccgtcggt 6
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaacaata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| ||||||||||||||| |||||||||
Sbjct: 39 ccgacggactcaccgacggaagtgatccgtcggt 6
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| |||||||||||||||| |||||||||
Sbjct: 41 ccgacggattcaccgacggaagtgttccgtcggt 8
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 101 gttttactgacggattaattccgtcggtgacagcaatgaaatctgtcggtgaaaacaata 42
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| |||||||||||||||| |||||||||
Sbjct: 41 ccgacggattcaccgacggaagtgatccgtcggt 8
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtga 30
||||||||||||| | ||||||||||||
Sbjct: 5 tttaccgacggatcacttccgtcggtga 32
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 155 bits (78), Expect = 7e-39
Identities = 90/94 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 102 gttttaccgacggattaattccgtcggtgacaacaattaaatccgtcggtgaaaacaata 43
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| |||||||||||||||| |||||||||
Sbjct: 42 ccgacggattcaccgacggaagtgatccgtcggt 9
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtga 30
||||||||||||| | ||||||||||||
Sbjct: 6 tttaccgacggatcacttccgtcggtga 33
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 147 bits (74), Expect = 2e-36
Identities = 89/94 (94%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 99 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgttggtgaaaacaata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||| | ||||||||||||||| |||||||||
Sbjct: 39 ccgacagactcaccgacggaagtgatccgtcggt 6
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtga 30
||||||||||||||| | ||||||||||||
Sbjct: 1 gttttaccgacggatcacttccgtcggtga 30
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacggcttcaccgacgga 80
||||||| ||||||||||||
Sbjct: 61 ccgacggattcaccgacgga 80
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggcttcaccgacgga 80
||||||| ||||||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 101 gttttaccgacggattaattccgtcggtgatagcaatgaaatccgtcggtgaaaccaata 42
Query: 61 ccgacggcttcaccgacgga 80
||||||| ||||||||||||
Sbjct: 41 ccgacggattcaccgacgga 22
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgatagcaatgaactccgtcggtgaaaacaata 60
Query: 61 ccgacggcttcaccgacgga 80
||||||| ||||||||||||
Sbjct: 61 ccgacggattcaccgacgga 80
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 99 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 40
Query: 61 ccgacggcttcaccgacggaa 81
||||||| ||||||||||||
Sbjct: 39 ccgacggactcaccgacggaa 19
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggattcattccgtcggtgacagcaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacggcttcaccgacggaa 81
||||||| ||||||||||||
Sbjct: 61 ccgacggactcaccgacggaa 81
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
Query: 61 ccgacggcttcaccgacgga 80
|||||| ||||| |||||
Sbjct: 61 tcgacggactcaccaacgga 80
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 123 bits (62), Expect = 2e-29
Identities = 87/94 (92%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 98 gttttaccgacggattaattccgt-ggtgacagcaatgaaatccgtcggtgaaaaccata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||| | ||||||||||| ||| |||||||||
Sbjct: 39 ccgacagaatcaccgacggacgtgatccgtcggt 6
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 123 bits (62), Expect = 2e-29
Identities = 86/94 (91%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||| || ||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 99 gttttaccgacgggttcattccgtcggtgatagcaattaactccgtcggtgaaaacaata 40
Query: 61 ccgacggcttcaccgacggaagtgctccgtcggt 94
||||||| |||||||||||| ||| |||||||||
Sbjct: 39 ccgacggattcaccgacggacgtgatccgtcggt 6
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 121 bits (61), Expect = 1e-28
Identities = 76/81 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggattaattccgttggtgatagccatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacggcttcaccgacggaa 81
|||||||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 117 bits (59), Expect = 2e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaaacata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 117 bits (59), Expect = 2e-27
Identities = 65/67 (97%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 115 bits (58), Expect = 6e-27
Identities = 73/78 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| |||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 2 gttttaccgacggactaattccgtcggtgacaggaatgaaatccgtcggtgaaatcatta 61
Query: 61 ccgacggcttcaccgacg 78
|||||||| |||||||||
Sbjct: 62 ccgacggcctcaccgacg 79
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 115 bits (58), Expect = 6e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcattgaaatccgtcggtaaaaacaata 60
Query: 61 ccgacg 66
||||||
Sbjct: 61 ccgacg 66
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 113 bits (57), Expect = 2e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgacagcaatgcaatccgtcggtgaaaacaata 60
Query: 61 c 61
|
Sbjct: 61 c 61
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 113 bits (57), Expect = 2e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 60
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| |||| |||||||
Sbjct: 61 ccgacggcatcacagacggaa 81
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 113 bits (57), Expect = 2e-26
Identities = 75/81 (92%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 101 gttttaccgacggactaattccgtcggtgacagcaatgcaatccgtcggtgaaacaaata 42
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| |||| |||||||
Sbjct: 41 ccgacggcatcacagacggaa 21
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 113 bits (57), Expect = 2e-26
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggattaattccgtcggtgataaacatgaaatccgtcggtgaaagaaata 60
Query: 61 ccgacggcttcaccgacggaa 81
|||||||||||||||||||||
Sbjct: 61 ccgacggcttcaccgacggaa 81
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 111 bits (56), Expect = 9e-26
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1 gttttaccgacggactaattccgtcggtgacagcaatgaaatccgtcggtaaaaataata 60
Query: 61 ccgacggcttcaccgacgga 80
||||||| || ||||||||
Sbjct: 61 ccgacggactcgccgacgga 80
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 62
|||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 1 tttaccgacgacttaattccgtcggtgatagccatgaaatccgtcggtgaaagaaatacc 60
Query: 63 gacggcttcaccgacggaa 81
|||||||||||||||||||
Sbjct: 61 gacggcttcaccgacggaa 79
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 105 bits (53), Expect = 6e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| | |||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 1 gttttaccgacggaatcattccgtcggtgacagtaatgaaatccgtcggtgaaaataata 60
Query: 61 ccgacggcttcaccgacggaa 81
|| |||| ||||||||||||
Sbjct: 61 ccaacggaatcaccgacggaa 81
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 101 bits (51), Expect = 9e-23
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 1 gttttaccgacggactcattccgtcggtgacagcaatgacatccgtcggtgaaaataata 60
Query: 61 ccgacgg 67
|||||||
Sbjct: 61 ccgacgg 67
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 101 bits (51), Expect = 9e-23
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 3 tttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatacc 62
|||||||||||| ||||||||||||||||| ||||||||||||||||||||| | ||||
Sbjct: 99 tttaccgacggactaattccgtcggtgacaacaatgaaatccgtcggtgaaataattacc 40
Query: 63 gacggcttcaccgacggaa 81
|||||| ||||| ||||||
Sbjct: 39 gacggcctcacctacggaa 21
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 1 gttttaccgacggactcattctgtcggtgacagcaatgaaatccgtcggtgaaaatcata 60
Query: 61 ccgacggcttcaccgac 77
||||||| ||||||||
Sbjct: 61 ccgacggactcaccgac 77
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 91.7 bits (46), Expect = 9e-20
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccga 64
|||||||||| | ||||||||||||| ||||||| |||||||||||||||| |||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cggcttcaccgacggaagtgctccgtcggt 94
||| |||||||||||| | |||||||||
Sbjct: 31 cggactcaccgacggaatggttccgtcggt 2
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 91.7 bits (46), Expect = 9e-20
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccga 64
|||||||||| | ||||||||||||| ||||||| |||||||||||||||| |||||||
Sbjct: 91 taccgacggactcattccgtcggtgaaagcaatgcaatccgtcggtgaaaatcataccga 32
Query: 65 cggcttcaccgacggaagtgctccgtcggt 94
||| |||||||||||| | |||||||||
Sbjct: 31 cggactcaccgacggaatggttccgtcggt 2
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 89.7 bits (45), Expect = 3e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| |||||||||| ||||||| |||||| ||| ||||||||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcagtgacaggaatgaactccatcggtgaaataatta 63
Query: 61 ccgacggcttcaccgacggaa 81
|||| ||||||||||||||||
Sbjct: 64 ccgatggcttcaccgacggaa 84
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 89.7 bits (45), Expect = 3e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
||||||||||| || ||||||||||||||| || |||||||||||||||||||| | ||
Sbjct: 1 gttttaccgacagactaattccgtcggtgataggaatgaaatccgtcggtgaaataatta 60
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| ||| ||||||||
Sbjct: 61 ccgacggcctcatcgacggaa 81
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 89.7 bits (45), Expect = 3e-19
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| |||||||||||||||||| |||||| ||||||||||||| | ||
Sbjct: 103 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 44
Query: 61 ccgacggcttcaccgacggaa 81
|| ||||| |||| |||||||
Sbjct: 43 ccaacggcctcactgacggaa 23
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 89.7 bits (45), Expect = 3e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||| ||||||| |||||||||||||||||| |||||| ||||||||||||| | ||
Sbjct: 1 gttttatcgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 60
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| ||| ||||||||
Sbjct: 61 ccgacggcctcatcgacggaa 81
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 89.7 bits (45), Expect = 3e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| |||||||||||||||||| |||||| ||||||||||||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataatta 63
Query: 61 ccgacggcttcaccgacggaa 81
|| ||||| |||| |||||||
Sbjct: 64 ccaacggcctcactgacggaa 84
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaataccgacgg 67
||||||| |||||||||||||||||| |||||| ||||||||||||| | |||||||||
Sbjct: 4 cgacggactaattccgtcggtgacaggaatgaactccgtcggtgaaataattaccgacgg 63
Query: 68 cttcaccgacggaa 81
| ||| ||||||||
Sbjct: 64 cctcatcgacggaa 77
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 81.8 bits (41), Expect = 8e-17
Identities = 71/81 (87%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| | ||||| |||||||||| |||||| ||||||||||||| ||
Sbjct: 4 gttttaccgacggactcattccatcggtgacaggaatgaactccgtcggtgaaatattta 63
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| ||||||||||||
Sbjct: 64 ccgacggcctcaccgacggaa 84
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| || ||||||||||||||| || ||| ||| ||||||||| | ||
Sbjct: 2 gttttaccgacggactacttccgtcggtgacaggaacgaactccatcggtgaaataatta 61
Query: 61 ccgacggcttcaccgac 77
|||||||| ||||||||
Sbjct: 62 ccgacggcctcaccgac 78
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| |||||||||||||||||| |||| | | |||||||||| | ||
Sbjct: 4 gttttaccgacggactaattccgtcggtgacaggaatgcactttgtcggtgaaataatta 63
Query: 61 ccgacggcttcaccgacggaa 81
|||||||| ||||| ||||||
Sbjct: 64 ccgacggcctcaccaacggaa 84
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||| ||| |||||| ||||||||||| |||||| |||||||||||||
Sbjct: 1 gttttaccgatggactaattctgtcggtgacaggaatgaactccgtcggtgaaa 54
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| ||||||||||||||| || |||| ||||||||| ||| | ||
Sbjct: 3 gttttaccgacggactaattccgtcggtgaaaggcatgacctccgtcggtaaaattatta 62
Query: 61 ccgacggcttcaccgacggaa 81
||||||| ||||||||||||
Sbjct: 63 ccgacggtctcaccgacggaa 83
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaata 60
|||||||||||||| | ||||||||||||| || ||| || || |||||||||| | ||
Sbjct: 1 gttttaccgacggactcattccgtcggtgatagaaatcaactctgtcggtgaaataatta 60
Query: 61 ccgacggcttcaccgacggaa 81
|||| ||| ||||||||||||
Sbjct: 61 ccgatggcctcaccgacggaa 81
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 2 ttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggt 50
|||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 99 ttttaccgacggattaattccgtcggtgtaaggcatgaaatccgtcggt 51
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaa 54
|||||||||||||| |||||| |||||| |||| ||||| |||||||||||||
Sbjct: 1 gttttaccgacggactaattctgtcggtaacaggcatgaactccgtcggtgaaa 54
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||||||||||||||||||
Sbjct: 2 gttttaccgacggattaattccgtcggtg 30
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 2 ttttaccgacggattaattccgtcggtgacagcaatgaaatccgtcggtgaaaacaatac 61
||||||||||||| |||||| |||||||| || ||||| ||||| || |||| | | |
Sbjct: 5 ttttaccgacggactaattctgtcggtgataggcatgaactccgttggagaaattattcc 64
Query: 62 cgacggcttcaccgacggaa 81
|||||| |||| ||||||||
Sbjct: 65 cgacggtttcatcgacggaa 84
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 76 taccgacggaataattccgtcggtga 101
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggtga 30
|||||||||| |||||||||||||||
Sbjct: 81 taccgacggaataattccgtcggtga 106
>54079_ptc-miRf12257-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 71 cgacggattaattccgtcggt 91
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>53693_ptc-miRf11871-akr:pmrd
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 70 tcaccgacggaagtgctccgtcggt 94
|||||||||||| ||||||||||||
Sbjct: 23 tcaccgacggaaatgctccgtcggt 47
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggtg 29
|||||||||| ||||||||||||||
Sbjct: 25 taccgacggaataattccgtcggtg 1
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 ttaccgacggattaattccgtcggt 28
||||||||||| |||||||||||||
Sbjct: 78 ttaccgacggaataattccgtcggt 102
>52674_ptc-miRf10852-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 3 gttttaccgacggaaaaattccgtcggtg 31
>52595_ptc-miRf10773-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||| |||||||||||||| |||||||
Sbjct: 1 gttttatcgacggattaattctgtcggtg 29
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52554_ptc-miRf10732-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 70 tcaccgacggaagtgctccgtcggt 94
|||||||||||| ||||||||||||
Sbjct: 31 tcaccgacggaaatgctccgtcggt 7
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggacaaattccgtcggtg 72
>52442_ptc-miRf10620-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaacaattccgtcggtg 72
>52326_ptc-miRf10504-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 111 cgacggattaattccgtcggt 131
>52258_ptc-miRf10436-akr:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtc 25
|||||||||||||||||||||
Sbjct: 60 taccgacggattaattccgtc 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 cgacggattaattccgtcggt 28
|||||||||||||||||||||
Sbjct: 121 cgacggattaattccgtcggt 141
>52251_ptc-miRf10429-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 102 gttttaccgacggaaaaattccgtcggtg 74
>52092_ptc-miRf10270-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>51874_ptc-miRf10052-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 gttttaccgacggattaattccgtcggtg 29
|||||||||||||| |||||||||||||
Sbjct: 100 gttttaccgacggaaaaattccgtcggtg 72
>54293_ptc-miRf12471-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||||| |||||||||||
Sbjct: 68 taccgacggatttattccgtcggt 45
>54236_ptc-miRf12414-akr:pmrd
Length = 61
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 ataccgacggcttcaccgacggaa 81
||||||||||| ||||||||||||
Sbjct: 12 ataccgacggcatcaccgacggaa 35
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 32 taccgacggaataattccgtcggt 9
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 75 taccgacggactaattccgtcggt 98
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggattaattccgtcggt 28
|||||||||| |||||||||||||
Sbjct: 78 taccgacggaataattccgtcggt 101
