miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53136_ptc-miRf11314-akr:pmrd
Length = 157
Score = 254 bits (128), Expect = 2e-68
Identities = 148/157 (94%)
Strand = Plus / Plus
Query: 1 ccaagtgatttgggtctgacacccatgccagatctaagctacttggatctggtaatcatg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 ccaagtgacttgggtctgacacccatgccagatctaagctacttggatctgataatcatg 60
Query: 61 tttagatctaacatggctgccaaaactaagcgttttaggtttggcattcnnnnnnnggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 tttagatctaacatggctgccaaaactaagcgttttaggtttggcattcaaaaaaaggtg 120
Query: 121 catgggtctgacatggttaccagactcaggcgcttgg 157
|||||||||||||||||||||||||||||||||||||
Sbjct: 121 catgggtctgacatggttaccagactcaggcgcttgg 157
>52465_ptc-miRf10643-akr:pmrd
Length = 157
Score = 254 bits (128), Expect = 2e-68
Identities = 148/157 (94%)
Strand = Plus / Minus
Query: 1 ccaagtgatttgggtctgacacccatgccagatctaagctacttggatctggtaatcatg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 157 ccaagtgacttgggtctgacacccatgccagatctaagctacttggatctgataatcatg 98
Query: 61 tttagatctaacatggctgccaaaactaagcgttttaggtttggcattcnnnnnnnggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 97 tttagatctaacatggctgccaaaactaagcgttttaggtttggcattcaaaaaaaggtg 38
Query: 121 catgggtctgacatggttaccagactcaggcgcttgg 157
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 catgggtctgacatggttaccagactcaggcgcttgg 1
>53528_ptc-miRf11706-akr:pmrd
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 123 tgggtctgacatggttaccagac 145
|||||||||||||||||||||||
Sbjct: 25 tgggtctgacatggttaccagac 3
