miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54950_zma-miR164b:pmrd
          Length = 128

 Score = 99.6 bits (50), Expect = 8e-22
 Identities = 56/58 (96%)
 Strand = Plus / Plus

                                                                    
Query: 13 tagatggtggctgtgcatggtggagaagcagggcacgtgcattaccatccaatgccgc 70
          |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tagacggtggctgtgcgtggtggagaagcagggcacgtgcattaccatccaatgccgc 58



 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                
Query: 129 atggacggatggttcttcatgtgcccatcttctccaccgagcacaaactgtct 181
           ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 75  atggatggatggttcttgatgtgcccatcttctccaccgagcacgaactgtct 127




>54956_zma-miR164h:pmrd
          Length = 96

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 41/41 (100%)
 Strand = Plus / Plus

                                                   
Query: 30 tggtggagaagcagggcacgtgcattaccatccaatgccgc 70
          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggtggagaagcagggcacgtgcattaccatccaatgccgc 41



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 129 atggacggatggttcttcatgtgcccatcttctccaccg 167
           ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 58  atggatggatggttcttgatgtgcccatcttctccaccg 96




>54410_sbi-miR164:pmrd
          Length = 126

 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                
Query: 33 tggagaagcagggcacgtgcattaccatccaatgccgc 70
          ||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattaccatccaatgccgc 38



 Score = 61.9 bits (31), Expect = 2e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 130 tggacggatggttcttcatgtgcccatcttctcca 164
           |||| ||||||||||||||||||||||||||||||
Sbjct: 92  tggatggatggttcttcatgtgcccatcttctcca 126




>48839_osa-miR164b:pmrd
          Length = 109

 Score = 69.9 bits (35), Expect = 7e-13
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                 
Query: 25 gtgcatggtggagaagcagggcacgtgcattaccatcca 63
          ||||| |||||||||||||||||||||||||||||||||
Sbjct: 1  gtgcacggtggagaagcagggcacgtgcattaccatcca 39



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 37/38 (97%)
 Strand = Plus / Plus

                                                 
Query: 135 ggatggttcttcatgtgcccatcttctccaccgagcac 172
           |||||||||||||||||||| |||||||||||||||||
Sbjct: 72  ggatggttcttcatgtgcccgtcttctccaccgagcac 109




>54953_zma-miR164e:pmrd
          Length = 242

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 31 ggtggagaagcagggcacgtgcatt 55
          |||||||||||||||||||||||||
Sbjct: 2  ggtggagaagcagggcacgtgcatt 26




>54951_zma-miR164c:pmrd
          Length = 270

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 31 ggtggagaagcagggcacgtgcatt 55
          |||||||||||||||||||||||||
Sbjct: 16 ggtggagaagcagggcacgtgcatt 40




>54787_vvi-miR164c:pmrd
          Length = 97

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcattac 35




>53142_ptc-miRf11320-akr:pmrd
          Length = 167

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgcattac 39




>51623_ptc-miR164e:pmrd
          Length = 155

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcattac 35




>51348_ppl-miR164:pmrd
          Length = 159

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcattac 35




>48843_osa-miR164f:pmrd
          Length = 210

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 31 ggtggagaagcagggcacgtgcatt 55
          |||||||||||||||||||||||||
Sbjct: 22 ggtggagaagcagggcacgtgcatt 46




>48473_csi-miR164:pmrd
          Length = 168

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcattac 25




>47347_ath-miRf10247-akr:pmrd
          Length = 159

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgcattac 30



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 gttcttcatgtgcccatcttc 160
           |||||||||||||||||||||
Sbjct: 130 gttcttcatgtgcccatcttc 150




>46941_ath-miR164b:pmrd
          Length = 153

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 33 tggagaagcagggcacgtgcattac 57
          |||||||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgcattac 27



 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 140 gttcttcatgtgcccatcttc 160
           |||||||||||||||||||||
Sbjct: 127 gttcttcatgtgcccatcttc 147




>48842_osa-miR164e:pmrd
          Length = 132

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 24 tgtgcatggtggagaagcagggcacgtg 51
          |||||| |||||||||||||||||||||
Sbjct: 2  tgtgcagggtggagaagcagggcacgtg 29



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 135 ggatggttcttcatgtgcccatcttctccaccgagcac 172
           |||||||  |||||||| || |||||||||||||||||
Sbjct: 93  ggatggtcgttcatgtgtccgtcttctccaccgagcac 130




>54955_zma-miR164g:pmrd
          Length = 116

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>54954_zma-miR164f:pmrd
          Length = 177

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>54952_zma-miR164d:pmrd
          Length = 216

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgcat 41




>54949_zma-miR164a:pmrd
          Length = 152

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgcat 40




>54676_tae-miR164b:pmrd
          Length = 152

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>54413_sbi-miR164d:pmrd
          Length = 160

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 1  tggagaagcagggcacgtgcat 22




>50414_osa-miRf11199-akr:pmrd
          Length = 146

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 13 tggagaagcagggcacgtgcat 34




>48838_osa-miR164a:pmrd
          Length = 156

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 33 tggagaagcagggcacgtgcat 54
          ||||||||||||||||||||||
Sbjct: 17 tggagaagcagggcacgtgcat 38




>47540_ath-miRf10440-akr:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  catggtggagaagcagggcacgtgca 53
           |||| |||||||||||||||||||||
Sbjct: 100 catgttggagaagcagggcacgtgca 75




>47539_ath-miRf10439-akr:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 28  catggtggagaagcagggcacgtgca 53
           |||| |||||||||||||||||||||
Sbjct: 101 catgttggagaagcagggcacgtgca 76




>46940_ath-miR164a:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 28 catggtggagaagcagggcacgtgca 53
          |||| |||||||||||||||||||||
Sbjct: 14 catgttggagaagcagggcacgtgca 39




>54788_vvi-miR164d:pmrd
          Length = 118

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>54785_vvi-miR164a:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>54414_sbi-miR164e:pmrd
          Length = 205

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 3  tggagaagcagggcacgtgca 23




>52901_ptc-miRf11079-akr:pmrd
          Length = 171

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 15 tggagaagcagggcacgtgca 35




>51862_ptc-miRf10040-akr:pmrd
          Length = 91

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 77 tggagaagcagggcacgtgca 57




>51622_ptc-miR164d:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>51621_ptc-miR164c:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>51620_ptc-miR164b:pmrd
          Length = 162

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>51619_ptc-miR164a:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>48710_mtr-miR164c:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>48709_mtr-miR164b:pmrd
          Length = 144

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>48708_mtr-miR164a:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 6  tggagaagcagggcacgtgca 26




>48547_gma-miR164:pmrd
          Length = 95

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>48419_cav-miR164:pmrd
          Length = 95

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31




>48398_bra-miR164a:pmrd
          Length = 92

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 10 tggagaagcagggcacgtgca 30




>48341_bna-miR164:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 33 tggagaagcagggcacgtgca 53
          |||||||||||||||||||||
Sbjct: 7  tggagaagcagggcacgtgca 27




>54412_sbi-miR164c:pmrd
          Length = 153

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 24 tgtgcatggtggagaagcagggcacgtg 51
          |||||| |||||||||||||| ||||||
Sbjct: 12 tgtgcagggtggagaagcaggacacgtg 39




>54411_sbi-miR164b:pmrd
          Length = 111

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 33 tggagaagcagggcacgtgc 52
          ||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40




>48841_osa-miR164d:pmrd
          Length = 94

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 33 tggagaagcagggcacgtgc 52
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30




>46942_ath-miR164c:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 33 tggagaagcagggcacgtgc 52
          ||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30