miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53213_ptc-miRf11391-akr:pmrd
Length = 147
Score = 291 bits (147), Expect = 7e-80
Identities = 147/147 (100%)
Strand = Plus / Plus
Query: 1 ttcagcgagtagcgattccatagctactccaaggaaaacgacctccgtaaactcctgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcagcgagtagcgattccatagctactccaaggaaaacgacctccgtaaactcctgaaa 60
Query: 61 aagttttagcgcgatgcaacggtcggatcaatagtttaactagacctcctcttccgtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagttttagcgcgatgcaacggtcggatcaatagtttaactagacctcctcttccgtgag 120
Query: 121 tagcgatggtatcgctactataatgaa 147
|||||||||||||||||||||||||||
Sbjct: 121 tagcgatggtatcgctactataatgaa 147
>53374_ptc-miRf11552-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 68 agcgcgatgcaacggtcggatcaatagtt 96
|||||||| ||||||||||||||| ||||
Sbjct: 96 agcgcgatccaacggtcggatcaaaagtt 68
>52638_ptc-miRf10816-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 68 agcgcgatgcaacggtcggatcaatagtt 96
|||||||| ||||||||||||||| ||||
Sbjct: 6 agcgcgatccaacggtcggatcaaaagtt 34
>52216_ptc-miRf10394-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 69 gcgcgatgcaacggtcggatcaatagtt 96
||||||| ||||||||||||||| ||||
Sbjct: 102 gcgcgatccaacggtcggatcaaaagtt 75
