miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53528_ptc-miRf11706-akr:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 42 cagacccaagtagcttgggtctgaca 67
||||| ||||||||||||||||||||
Sbjct: 40 cagactcaagtagcttgggtctgaca 15
>53537_ptc-miRf11715-akr:pmrd
Length = 66
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 42 cagacccaagtagcttgggtctg 64
||||||||||| |||||||||||
Sbjct: 45 cagacccaagtcgcttgggtctg 23
>53094_ptc-miRf11272-akr:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 42 cagacccaagtagcttgggtctg 64
||||||||||||| |||||||||
Sbjct: 24 cagacccaagtaggttgggtctg 2
>53069_ptc-miRf11247-akr:pmrd
Length = 66
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 42 cagacccaagtagcttgggtctg 64
||||||||||| |||||||||||
Sbjct: 45 cagacccaagtcgcttgggtctg 23
>51911_ptc-miRf10089-akr:pmrd
Length = 89
Score = 38.2 bits (19), Expect = 8e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 41 ccagacccaagtagcttgggtctgaca 67
||||||||||||| |||||| ||||||
Sbjct: 89 ccagacccaagtaacttgggcctgaca 63
