miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccggg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgag 63
Query: 61 tttaataac 69
|||||||||
Sbjct: 64 tttaataac 72
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccaggccgggccggg 60
Query: 61 tttaataac 69
|||||||||
Sbjct: 61 tttaataac 69
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 123 bits (62), Expect = 2e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 121 bits (61), Expect = 7e-29
Identities = 67/69 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 2 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccggaccgggccgag 61
Query: 61 tttaataac 69
|||||||||
Sbjct: 62 tttaataac 70
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 121 bits (61), Expect = 7e-29
Identities = 67/69 (97%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccggg 60
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 75 ggtcttttattaaacccggaccggtccagccaccgggtcgacctgctgggccgggccggg 16
Query: 61 tttaataac 69
|||||||||
Sbjct: 15 tttaataac 7
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 117 bits (59), Expect = 1e-27
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaataa 68
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaataa 62
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggttt 63
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacccgccgggccgggccgggttt 60
Query: 64 aataac 69
||||||
Sbjct: 61 aataac 66
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 115 bits (58), Expect = 5e-27
Identities = 64/66 (96%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggttt 63
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacctgccgggccgggccgggttt 9
Query: 64 aataac 69
||||||
Sbjct: 8 aataac 3
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 113 bits (57), Expect = 2e-26
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggttt 63
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgacttgccgggccgggccgggttt 9
Query: 64 aataa 68
|||||
Sbjct: 8 aataa 4
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 66
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcaacctgccgggccgggccgggtttaat 60
Query: 67 aa 68
||
Sbjct: 61 aa 62
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 105 bits (53), Expect = 4e-24
Identities = 66/70 (94%), Gaps = 4/70 (5%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgg----gtcgacccgccgggccgggccgg 59
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgg 13
Query: 60 gtttaataac 69
||||||||||
Sbjct: 12 gtttaataac 3
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 67/72 (93%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
Query: 58 gggtttaataac 69
|||||||||||
Sbjct: 61 aggtttaataac 72
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 99.6 bits (50), Expect = 3e-22
Identities = 67/72 (93%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 78 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 19
Query: 58 gggtttaataac 69
|||||||||||
Sbjct: 18 aggtttaataac 7
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 99.6 bits (50), Expect = 3e-22
Identities = 67/72 (93%), Gaps = 3/72 (4%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggcc 57
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 85 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 26
Query: 58 gggtttaataac 69
|||||||||||
Sbjct: 25 aggtttaataac 14
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 97.6 bits (49), Expect = 1e-21
Identities = 62/66 (93%), Gaps = 4/66 (6%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgg----gtcgacccgccgggccgggccgggtt 62
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccggtcgggtcgacccgccgggccgggccgggtt 60
Query: 63 taataa 68
||||||
Sbjct: 61 taataa 66
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 93.7 bits (47), Expect = 2e-20
Identities = 69/77 (89%), Gaps = 7/77 (9%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgg-------gtcgacccgccgggccgggc 56
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgggtcccgggtcgacccgccgggccgggc 60
Query: 57 cgggtttaataactatg 73
|||||||||||||||||
Sbjct: 61 cgggtttaataactatg 77
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 87.7 bits (44), Expect = 1e-18
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggt 61
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtc-ctgggccgggccgggccgggt 60
Query: 62 ttaataac 69
||||||||
Sbjct: 61 ttaataac 68
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 46
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataa 84
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 81.8 bits (41), Expect = 6e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataactatg 73
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggccgggtttaataactatg 92
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 47
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataactatggt 75
|||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 53 ccgggtcgacccgccgggccggaccgggtttaataactgtggt 95
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/76 (88%), Gaps = 7/76 (9%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagcca-------ccgggtcgacccgccgggccg 53
|||||||||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct: 81 ggtcttttattaaacccggaccggtccagccaccaggtcccgggtcgacccaccaggccg 22
Query: 54 ggccgggtttaataac 69
||||||||||||||||
Sbjct: 21 ggccgggtttaataac 6
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 81.8 bits (41), Expect = 6e-17
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcga 44
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataactatg 73
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 52 ccgggtcgacccgccgggccgggtcgggtttaataactatg 92
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/73 (87%), Gaps = 7/73 (9%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccacc-------gggtcgacccgccgggccgggc 56
||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtcttgggtcgacccgccgggccggac 60
Query: 57 cgggtttaataac 69
|||||||||||||
Sbjct: 61 cgggtttaataac 73
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgacc 43
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataac 69
|||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgacc 43
Score = 58.0 bits (29), Expect = 9e-10
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataac 69
|||||||||||||||||||| | ||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccagaccgggtttaataac 85
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 77.8 bits (39), Expect = 1e-15
Identities = 62/69 (89%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggccggg 60
||||||||||||||||||||||| ||| ||||| |||||| | |||||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccgggccgggccggg 60
Query: 61 tttaataac 69
|||||||||
Sbjct: 61 tttaataac 69
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 75.8 bits (38), Expect = 4e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 6 tttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgacc 46
Score = 61.9 bits (31), Expect = 6e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataactatggt 75
||||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 51 ccgggtcgacccgccggcctgggccgggtttaataactgtggt 93
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccactgggtcgacc 46
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataac 69
|||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccgggtcgacccgccgggccgggccgggtttaataac 85
Score = 58.0 bits (29), Expect = 9e-10
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
|||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 2 ggtcttttattaaacccggacc-gtccagcgaccgggtcga 41
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacc 37
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||||||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgggtttaataa 78
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataac 69
|||||||||||||||||||||||||||||||||||||
Sbjct: 39 ccgggtcgacccgccgggccgggccgggtttaataac 3
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 71.9 bits (36), Expect = 6e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgac 42
||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgac 36
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
|||||||||||||||||||||||||| |||||||||
Sbjct: 43 ccgggtcgacccgccgggccgggccgagtttaataa 78
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 cttttattaaacccggaccggtccagccaccggatcgacc 40
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 38 tcgacccgccgggccgggccgggtttaataac 69
|||||| |||||||||||||||||||||||||
Sbjct: 51 tcgacctgccgggccgggccgggtttaataac 82
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 71.9 bits (36), Expect = 6e-14
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggttgacc 45
Score = 48.1 bits (24), Expect = 9e-07
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 38 tcgacccgccgggccgggccgggtttaataac 69
||||||| || |||||||||||||||||||||
Sbjct: 34 tcgacccaccaggccgggccgggtttaataac 3
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 69.9 bits (35), Expect = 2e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1 ggtcttttagtaaacccggaccggtccagccaccggatcgacc 43
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
|||||||||||||| ||| |||||||||||||||||
Sbjct: 49 ccgggtcgacccgctgggtcgggccgggtttaataa 84
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgggtc 39
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||||||||||| ||||||||||||||||
Sbjct: 43 ccgggtcgacccgccgggctgggccgggtttaataa 78
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacc 37
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
|||||| |||||||||||||||||||||||||||||
Sbjct: 43 ccgggttgacccgccgggccgggccgggtttaataa 78
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 taaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgacc 43
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataact 70
|||||||||||||||||||||| |||||||||| ||||
Sbjct: 49 ccgggtcgacccgccgggccggtccgggtttaaaaact 86
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcga 41
||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 68 ggtcttttaataaacccagaccggtccagccaccgggtcga 108
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 3 tcttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 63 tcttttattaaacccagaccggtccagccaccgggttgacc 103
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||| ||||||||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgacc 42
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 63.9 bits (32), Expect = 1e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
|||||||||||||||||||||| |||||||||||||
Sbjct: 43 ccgggtcgacccgccgggccggaccgggtttaataa 78
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcga 41
||||||||||||||||||||||||||| |||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcga 35
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
||||| |||||||||||||||||||||||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgggtc 39
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 61.9 bits (31), Expect = 6e-11
Identities = 54/62 (87%), Gaps = 6/62 (9%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacccgccgggccgggccgggtttaat 66
|||||||||||||||||||||||||||| |||| | |||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc------ctgggccgggccgggtttaat 54
Query: 67 aa 68
||
Sbjct: 55 aa 56
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 20 accggtccagccaccgggtcgacccgccgggccgg 54
||||||||| |||||||||||||||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgacccgccgggccgg 4
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 60.0 bits (30), Expect = 2e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 14 acccggaccggtccagccaccgggtcgacccgccgggc 51
|||||||||||||||||||||| || ||||||||||||
Sbjct: 38 acccggaccggtccagccaccgcgttgacccgccgggc 1
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 12 aaacccggaccggtccagccaccgggtcgacccg 45
|||||||||| |||||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacccg 9
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 37 gtcgacccgccgggccgggccgggtttaataa 68
|||||||||||||||||| |||||||||||||
Sbjct: 32 gtcgacccgccgggccggtccgggtttaataa 1
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||| |||| |||||||||||||||| ||||||||||
Sbjct: 1 gtcttttaacaaactcggaccggtccagccatcgggtcgacc 42
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 33 ccgggtcgacccgccgggccgggccgggtttaataa 68
||||||||||| ||||||||| |||||||||||||
Sbjct: 45 ccgggtcgacctgccgggccgatccgggtttaataa 10
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccac 33
||||||||| ||||||| ||||||||||||||
Sbjct: 93 ggtcttttaacaaacccgaaccggtccagccac 61
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggccgggccgggttt 63
|||||||||||||||||||||| |||||||
Sbjct: 106 ccgggtcgacccgccgggccggttcgggttt 136
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 5 ttttattaaacccggaccggtccagccaccgggtcgacc 43
||||| ||||||||||||||||| || || |||||||||
Sbjct: 81 ttttagtaaacccggaccggtccggctactgggtcgacc 43
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ccggaccggtccagccaccgggtcga 41
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggaccggtccagccaccgggt 38
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 5e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 12 aaacccggaccggtccagccaccgggtcg 40
||||||| |||||||||||| ||||||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcg 100
>52238_ptc-miRf10416-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 36 ggtcgacccgccgggccgggc 56
|||||||||||||||||||||
Sbjct: 25 ggtcgacccgccgggccgggc 5
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 5e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 tcttttattaaacccggaccggtccagccaccg 35
||||||| ||||| || ||||||||||||||||
Sbjct: 63 tcttttaataaactcgaaccggtccagccaccg 31
>53762_ptc-miRf11940-akr:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgacccgccgggcc 52
||||||||||||||||||||
Sbjct: 94 ccgggtcgacccgccgggcc 113
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 41 acccgccgggccgggccgggtttaataa 68
|||||| ||||||| |||||||||||||
Sbjct: 28 acccgctgggccggaccgggtttaataa 1
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 41 acccgccgggccgggccgggtttaataa 68
|||||| ||||||| |||||||||||||
Sbjct: 28 acccgctgggccggaccgggtttaataa 1
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccac 33
|||||||||||| |||| |||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccac 52
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 13 aacccggaccggtccagccaccgggtcgacc 43
|||| ||| ||||||||||||||||| ||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgacc 108
