miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52858_ptc-miRf11036-akr:pmrd
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
>53681_ptc-miRf11859-akr:pmrd
Length = 99
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tcattgctatcaccgacggaattaatccgtcggtaaaac 99
>53918_ptc-miRf12096-akr:pmrd
Length = 99
Score = 172 bits (87), Expect = 3e-44
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 5 taccgacggatcacttccgtcggtgagtctgtcggtattgttttcaccaacggatttcat 64
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||||||||||||||||||||||||||||||
Sbjct: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggtaaaac 99
|||||||||||| | |||||||||||||||
Sbjct: 30 tcaccgacggaagtgatccgtcggtaaaac 1
>53326_ptc-miRf11504-akr:pmrd
Length = 93
Score = 167 bits (84), Expect = 2e-42
Identities = 90/92 (97%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2 taccgacggatcacttccgtcggtgaagccgtcggtattgttttcaccgacggatttcat 61
Query: 65 tgctgtcaccgacggaattaatccgtcggtaa 96
||||||||||||||||||||||||||||||||
Sbjct: 62 tgctgtcaccgacggaattaatccgtcggtaa 93
>53106_ptc-miRf11284-akr:pmrd
Length = 104
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 7 taccgacggatcacttccgtcggtgaatccgtcggtattgttttcaccgacagatttcat 66
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||||||||||||| |||||||
Sbjct: 67 tgctgtcaccgacggaattaatccgtcagtaaaac 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggtaaa 97
|||||||||||| | |||||||||||||
Sbjct: 32 tcaccgacggaagtgatccgtcggtaaa 5
>52831_ptc-miRf11009-akr:pmrd
Length = 105
Score = 165 bits (83), Expect = 7e-42
Identities = 92/95 (96%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 8 taccgacggatcacttccgtcggtgaatccgtcggtattgttttcaccgacggatttaat 67
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
|| ||||||||||||||||||||||||||||||||
Sbjct: 68 tgttgtcaccgacggaattaatccgtcggtaaaac 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggtaaa 97
|||||||||||| | |||||||||||||
Sbjct: 33 tcaccgacggaagtgatccgtcggtaaa 6
>54297_ptc-miRf12475-akr:pmrd
Length = 104
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8 accgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacggatttcatt 67
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 68 gctgtcaccgacggaattaatccgtcggtaaaac 101
>53882_ptc-miRf12060-akr:pmrd
Length = 104
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Plus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8 accgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacggatttcatt 67
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 68 gctgtcaccgacggaattaatccgtcggtaaaac 101
>53526_ptc-miRf11704-akr:pmrd
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 94 accgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacggatttcatt 35
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 34 gctgtcaccgacggaattaatccgtcggtaaaac 1
>53027_ptc-miRf11205-akr:pmrd
Length = 98
Score = 163 bits (82), Expect = 3e-41
Identities = 91/94 (96%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 94 accgacggagcacttccgtcggtgaagccgtcggtattgttttcaccgacggatttcatt 35
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||||||||||||||||||||
Sbjct: 34 gctgtcaccgacggaattaatccgtcggtaaaac 1
>54061_ptc-miRf12239-akr:pmrd
Length = 104
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7 taccgacggagcacttccgtcggtgaatccgtcggtattgttttcaccgacggatttcat 66
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| ||||||| ||||||||||||||||||||||
Sbjct: 67 tgctttcaccgatggaattaatccgtcggtaaaac 101
>53345_ptc-miRf11523-akr:pmrd
Length = 104
Score = 157 bits (79), Expect = 2e-39
Identities = 91/95 (95%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 7 taccgacggaacacttccgtcggtgaatccgtcggtattggtttcaccgacggatttcat 66
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| ||||||||||||||||||||||||||||||
Sbjct: 67 tgctatcaccgacggaattaatccgtcggtaaaac 101
>53620_ptc-miRf11798-akr:pmrd
Length = 98
Score = 149 bits (75), Expect = 4e-37
Identities = 94/99 (94%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
|||||||||||||||||| ||||||||||| || |||||||| |||||||||||||||||
Sbjct: 1 gttataccgacggatcacgtccgtcggtgattctgtcggtatggttttcaccgacggatt 60
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 61 tcattgctgtcacc-acggaattaatccgtcggtaaaac 98
>53487_ptc-miRf11665-akr:pmrd
Length = 99
Score = 149 bits (75), Expect = 4e-37
Identities = 93/99 (93%)
Strand = Plus / Plus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gttataccgacggaatggttccgtcggtgagtccgtcggtattattttcaccgacggatt 60
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 tcattgctgtcaccgacggaatgaatccgtcggtaaaac 99
>52619_ptc-miRf10797-akr:pmrd
Length = 99
Score = 149 bits (75), Expect = 4e-37
Identities = 93/99 (93%)
Strand = Plus / Minus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 99 gttataccgacggaatggttccgtcggtgagtccgtcggtattattttcaccgacggatt 40
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||||||||||||||||||||| ||||||||||||||||
Sbjct: 39 tcattgctgtcaccgacggaatgaatccgtcggtaaaac 1
>52376_ptc-miRf10554-akr:pmrd
Length = 99
Score = 143 bits (72), Expect = 3e-35
Identities = 78/80 (97%)
Strand = Plus / Minus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tccgttggtgagtccgtcgatattgttttcaccgacggatttcattgctgtcaccgacgg 21
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53270_ptc-miRf11448-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 80 tccgtcggtgaatccgtcggtattgttttcaccgacggagttcattgctatcaccgacgg 21
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53262_ptc-miRf11440-akr:pmrd
Length = 104
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 82 aattaatccgtcggtaaaac 101
>53194_ptc-miRf11372-akr:pmrd
Length = 104
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 22 tccgtcggtgaatccgtcggtattggtttcaccgacggatttcattgctatcaccgacgg 81
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 82 aattaatccgtcggtaaaac 101
>52114_ptc-miRf10292-akr:pmrd
Length = 99
Score = 135 bits (68), Expect = 7e-33
Identities = 77/80 (96%)
Strand = Plus / Minus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 80 tccgtcggtgaatccgtcggtattgttttcaccgacggagttcattgctatcaccgacgg 21
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
>53438_ptc-miRf11616-akr:pmrd
Length = 99
Score = 133 bits (67), Expect = 3e-32
Identities = 88/95 (92%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||| || ||
Sbjct: 5 taccgacggatcacgtccgtcggtgaatccgtcggtattgttttcaccgacggagttaat 64
Query: 65 tgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| ||||||||||||| || |||||||||||||
Sbjct: 65 tgctatcaccgacggaatgaacccgtcggtaaaac 99
>54104_ptc-miRf12282-akr:pmrd
Length = 99
Score = 129 bits (65), Expect = 4e-31
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||
Sbjct: 81 ttccgtcagtgagtccatctgtattgttttcaccgacggattgcattgctgtcaccgacg 22
Query: 79 gaattaatccgtcggtaaaac 99
|||||||||||||||||||||
Sbjct: 21 gaattaatccgtcggtaaaac 1
>52673_ptc-miRf10851-akr:pmrd
Length = 99
Score = 127 bits (64), Expect = 2e-30
Identities = 76/80 (95%)
Strand = Plus / Minus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
|||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 80 tccgtcggcgagtccgtcggtattatttttaccgacggatttcattgctgtcaccgacgg 21
Query: 80 aattaatccgtcggtaaaac 99
||||| ||||||||||||||
Sbjct: 20 aattagtccgtcggtaaaac 1
>52637_ptc-miRf10815-akr:pmrd
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 32 tccgtcggtattgttttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 91
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tccgtcggtatgtttttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 9
Query: 92 ggtaaaac 99
||||||||
Sbjct: 8 ggtaaaac 1
>52325_ptc-miRf10503-akr:pmrd
Length = 87
Score = 119 bits (60), Expect = 4e-28
Identities = 66/68 (97%)
Strand = Plus / Minus
Query: 32 tccgtcggtattgttttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 91
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tccgtcggtatgattttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 9
Query: 92 ggtaaaac 99
||||||||
Sbjct: 8 ggtaaaac 1
>52264_ptc-miRf10442-akr:pmrd
Length = 99
Score = 119 bits (60), Expect = 4e-28
Identities = 75/80 (93%)
Strand = Plus / Minus
Query: 20 tccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacgg 79
||||||||| | | ||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 80 tccgtcggtaatttcgtcggtattgtttttaccgacggatttcaatgctgtcaccgacgg 21
Query: 80 aattaatccgtcggtaaaac 99
||||||||||||||||||||
Sbjct: 20 aattaatccgtcggtaaaac 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggt 28
|||||||||||||| |||||||||
Sbjct: 71 taccgacggatcacgtccgtcggt 94
>52483_ptc-miRf10661-akr:pmrd
Length = 99
Score = 117 bits (59), Expect = 2e-27
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 1 gttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatt 60
|||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 99 gttataccgacggacatgttctgtcggtgagtccgtcggtatgattttcaccgacggatt 40
Query: 61 tcattgctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||||||| |||| | ||||||||||||||
Sbjct: 39 tcattgctgtcaccgacagaatgagtccgtcggtaaaac 1
>53602_ptc-miRf11780-akr:pmrd
Length = 100
Score = 115 bits (58), Expect = 6e-27
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 22 cgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacggaa 81
|||||||||| ||||||||| || |||||||||||||||||||| |||||||||||||||
Sbjct: 79 cgtcggtgaggccgtcggtaatgatttcaccgacggatttcattcctgtcaccgacggaa 20
Query: 82 ttaatccgtcggtaaaac 99
||| ||||||||||||||
Sbjct: 19 ttagtccgtcggtaaaac 2
>52912_ptc-miRf11090-akr:pmrd
Length = 99
Score = 115 bits (58), Expect = 6e-27
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 2 ttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggattt 61
||||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||
Sbjct: 98 ttataccgacggacgggttccgtcggtgattccgttggtattattttcaccgacggattt 39
Query: 62 cattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| |||||||||||||||| | ||||||||||||||
Sbjct: 38 cattactgtcaccgacggaatgattccgtcggtaaaac 1
>53644_ptc-miRf11822-akr:pmrd
Length = 91
Score = 109 bits (55), Expect = 4e-25
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1 taccgacggaaccattccgtcggtgagtccgtcggtatgattttcaccgacggattgcat 60
Query: 65 tgctgtcaccgacggaattaatccgtcggta 95
|||| ||||||||||||| | ||||||||||
Sbjct: 61 tgctttcaccgacggaatgagtccgtcggta 91
>52732_ptc-miRf10910-akr:pmrd
Length = 91
Score = 109 bits (55), Expect = 4e-25
Identities = 82/91 (90%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcat 64
|||||||||| | |||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1 taccgacggaaccattccgtcggtgagtccgtcggtatgattttcaccgacggattgcat 60
Query: 65 tgctgtcaccgacggaattaatccgtcggta 95
|||| ||||||||||||| | ||||||||||
Sbjct: 61 tgctttcaccgacggaatgagtccgtcggta 91
>51848_ptc-miRf10026-akr:pmrd
Length = 99
Score = 107 bits (54), Expect = 1e-24
Identities = 84/94 (89%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
|||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 94 accgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatttcatg 35
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
||| ||||| ||||||||||||||||||||||||
Sbjct: 34 gctatcaccaacggaattaatccgtcggtaaaac 1
>53254_ptc-miRf11432-akr:pmrd
Length = 98
Score = 105 bits (53), Expect = 6e-24
Identities = 74/81 (91%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 81 ttccgtctgtgatgccgtcggtatttgtttcaccgacggattgcattgctgtcaccgacg 22
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 21 gaattagtccgtcggtaaaac 1
>52517_ptc-miRf10695-akr:pmrd
Length = 104
Score = 105 bits (53), Expect = 6e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||| |||| ||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 21 ttccgtctgtgatgccgtcggtatttgtttcaccgacggattgcattgctgtcaccgacg 80
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 81 gaattagtccgtcggtaaaac 101
>52330_ptc-miRf10508-akr:pmrd
Length = 87
Score = 103 bits (52), Expect = 2e-23
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 32 tccgtcggtattgttttcaccgacggatttcattgctgtcaccgacggaattaatccgtc 91
|||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||||
Sbjct: 68 tccgtcggtattattttcaccgacggatgtcattgctgtcaccgacggaatgagtccgtc 9
Query: 92 ggtaaaac 99
||||||||
Sbjct: 8 ggtaaaac 1
>52255_ptc-miRf10433-akr:pmrd
Length = 104
Score = 101 bits (51), Expect = 9e-23
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
|||||| |||||| ||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct: 21 ttccgtaggtgaggccgtcggtaattatttcaccgacggatttcattgttgtcaccgacg 80
Query: 79 gaattaatccgtcggtaaa 97
|||||| ||||||||||||
Sbjct: 81 gaattagtccgtcggtaaa 99
>52088_ptc-miRf10266-akr:pmrd
Length = 99
Score = 99.6 bits (50), Expect = 4e-22
Identities = 83/94 (88%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
|||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 94 accgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatttcatg 35
Query: 66 gctgtcaccgacggaattaatccgtcggtaaaac 99
| ||||||||||||||||||||||||||||||
Sbjct: 34 tttatcaccgacggaattaatccgtcggtaaaac 1
>52229_ptc-miRf10407-akr:pmrd
Length = 95
Score = 95.6 bits (48), Expect = 6e-21
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggatttcatt 65
|||||||||| |||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 92 accgacggatagattccgtcggtgaagccgtcggtatttctttcaccgacggatttcatg 33
Query: 66 gctgtcaccgacggaattaatccgtcggtaaa 97
||| |||||||||||||||| ||||||||||
Sbjct: 32 gctatcaccgacggaattaagtcgtcggtaaa 1
>52480_ptc-miRf10658-akr:pmrd
Length = 107
Score = 91.7 bits (46), Expect = 9e-20
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 2 ttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggattt 61
||||||||||||| ||||||| ||||| |||| |||| | ||||||||||||| ||
Sbjct: 6 ttataccgacggacgtgttccgtcagtgaggccgttggtaattatttcaccgacggagtt 65
Query: 62 cattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| |||||||||||||||||| ||||||||||||||
Sbjct: 66 cattcctgtcaccgacggaattagtccgtcggtaaaac 103
>52166_ptc-miRf10344-akr:pmrd
Length = 99
Score = 91.7 bits (46), Expect = 9e-20
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 2 ttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggattt 61
||||||||||||| |||||||| |||| ||||||||| | ||||||||||||| ||
Sbjct: 98 ttataccgacggacgtgttccgtcgatgaggccgtcggtaattatttcaccgacggagtt 39
Query: 62 cattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| |||||||||||||||||| ||||||| ||||||
Sbjct: 38 cattcctgtcaccgacggaattagtccgtcgataaaac 1
>52071_ptc-miRf10249-akr:pmrd
Length = 105
Score = 91.7 bits (46), Expect = 9e-20
Identities = 85/98 (86%)
Strand = Plus / Minus
Query: 2 ttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggattt 61
||||||||||||| ||||||| ||||| |||| |||| | ||||||||||||| ||
Sbjct: 101 ttataccgacggacgtgttccgtcagtgaggccgttggtaattatttcaccgacggagtt 42
Query: 62 cattgctgtcaccgacggaattaatccgtcggtaaaac 99
|||| |||||||||||||||||| ||||||||||||||
Sbjct: 41 cattcctgtcaccgacggaattagtccgtcggtaaaac 4
>53168_ptc-miRf11346-akr:pmrd
Length = 98
Score = 89.7 bits (45), Expect = 4e-19
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
|||||||| |||| ||||||||| | |||||||||||||||||||| || |||||||||
Sbjct: 81 ttccgtcgatgaggccgtcggtaattatttcaccgacggatttcattcctatcaccgacg 22
Query: 79 gaattaatccgtcggtaaaac 99
|||||| || |||||||||||
Sbjct: 21 gaattagtctgtcggtaaaac 1
>53422_ptc-miRf11600-akr:pmrd
Length = 91
Score = 83.8 bits (42), Expect = 2e-17
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
|||||||| |||| ||||||||| | ||||||||||||| |||||| ||||||||||||
Sbjct: 77 ttccgtcgatgaggccgtcggtaattatttcaccgacggagttcattcctgtcaccgacg 18
Query: 79 gaattaatccgtcg 92
|||||| |||||||
Sbjct: 17 gaattagtccgtcg 4
>54224_ptc-miRf12402-akr:pmrd
Length = 105
Score = 81.8 bits (41), Expect = 9e-17
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||||||||| ||||||||| ||||||||||||| |||||| |||||||||| |
Sbjct: 84 ttccgtcggtgaggccgtcggtaaatatttcaccgacggagttcattcctgtcaccgatg 25
Query: 79 gaattaatccgtcggtaaaac 99
|||| | ||||||||||||||
Sbjct: 24 gaatgagtccgtcggtaaaac 4
>52567_ptc-miRf10745-akr:pmrd
Length = 99
Score = 75.8 bits (38), Expect = 5e-15
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 2 ttataccgacggatcacttccgtcggtgagtccgtcggtattgttttcaccgacggattt 61
|||||||||||||| ||||||||||||| || |||||| | |||||||||| || ||
Sbjct: 98 ttataccgacggatatgttccgtcggtgaggccatcggtaattatttcaccgacagagtt 39
Query: 62 cattgctgtcaccgacggaattaatccgtcggtaaaac 99
||| || ||||||||||||| | ||||||||||||||
Sbjct: 38 gatttctatcaccgacggaatgagtccgtcggtaaaac 1
>54311_ptc-miRf12489-akr:pmrd
Length = 100
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 23 gtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacggaat 82
||||||||| ||||||||| | ||||||||| ||| ||| || |||||||||||||||
Sbjct: 78 gtcggtgaggccgtcggtaattatttcaccgatggagttcgttcctgtcaccgacggaag 19
Query: 83 taatccgtcggtaaaac 99
|| ||||||||||||||
Sbjct: 18 tagtccgtcggtaaaac 2
>53887_ptc-miRf12065-akr:pmrd
Length = 102
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||||||||| ||||||||| | ||| ||||||||| |||| || |||||||||
Sbjct: 83 ttccgtcggtgagaccgtcggtaataattttaccgacggaggtcatgcctttcaccgacg 24
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 23 gaattagtccgtcggtaaaac 3
>53349_ptc-miRf11527-akr:pmrd
Length = 105
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
|||||||||||| || |||||| | ||||||||| ||| |||||| ||||||| ||||
Sbjct: 84 ttccgtcggtgaagccatcggtaattatttcaccgatggagttcattcctgtcactgacg 25
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 24 gaattagtccgtcggtaaaac 4
>53201_ptc-miRf11379-akr:pmrd
Length = 105
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
|||||| |||||| ||||||||| | |||||||||| | | |||| ||||||||||||
Sbjct: 84 ttccgttggtgaggccgtcggtaattatttcaccgacaaagtgcattcctgtcaccgacg 25
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 24 gaattagtccgtcggtaaaac 4
>54178_ptc-miRf12356-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 46 tttcaccgacggatttcattgctgtcaccgacggaattaatccgtcggtaaaac 99
||||||||||||| |||||| ||||||||||| |||||| ||| ||||||||||
Sbjct: 54 tttcaccgacggagttcattcctgtcaccgacagaattagtccatcggtaaaac 1
>52197_ptc-miRf10375-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 5e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 50 accgacggatttcattgctgtcaccgacggaattaatccgtcggtaaaa 98
||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 51 accgacggatttcatgccttacaccgacggaattaatccgtcggtaaaa 99
>51991_ptc-miRf10169-akr:pmrd
Length = 99
Score = 65.9 bits (33), Expect = 5e-12
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 19 ttccgtcggtgagtccgtcggtattgttttcaccgacggatttcattgctgtcaccgacg 78
||||||| ||||| ||||||| | | ||||||||||||| ||||| |||| ||||||
Sbjct: 81 ttccgtcagtgagaccgtcgggaataatttcaccgacggagttcatgcctgttaccgaca 22
Query: 79 gaattaatccgtcggtaaaac 99
|||||| ||||||||||||||
Sbjct: 21 gaattagtccgtcggtaaaac 1
>52296_ptc-miRf10474-akr:pmrd
Length = 100
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
|||||||||||||||||||||||||||||
Sbjct: 30 caccgacggaattaatccgtcggtaaaac 2
>53707_ptc-miRf11885-akr:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 5 taccgacggatcacttccgtcggtgagtccgtcggta 41
||||||||||||| |||||| ||||| ||||||||||
Sbjct: 10 taccgacggatcatttccgttggtgattccgtcggta 46
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggta 95
||||||||||||||| ||||||||||
Sbjct: 101 tcaccgacggaattattccgtcggta 76
>51866_ptc-miRf10044-akr:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggta 95
||||||||||||||| ||||||||||
Sbjct: 106 tcaccgacggaattattccgtcggta 81
>54079_ptc-miRf12257-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcg 92
|||||||||||||||||||||
Sbjct: 91 accgacggaattaatccgtcg 71
>53978_ptc-miRf12156-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaac 100
>53679_ptc-miRf11857-akr:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggta 95
|||||||||||||| ||||||||||
Sbjct: 1 caccgacggaattattccgtcggta 25
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcggtaa 96
||||||||||||| |||||||||||
Sbjct: 102 accgacggaattattccgtcggtaa 78
>52674_ptc-miRf10852-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 31 caccgacggaatttttccgtcggtaaaac 3
>52595_ptc-miRf10773-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||| |||||||||||||| ||||||
Sbjct: 29 caccgacagaattaatccgtcgataaaac 1
>52594_ptc-miRf10772-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaac 100
>52463_ptc-miRf10641-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaatttgtccgtcggtaaaac 100
>52442_ptc-miRf10620-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaattgttccgtcggtaaaac 100
>52326_ptc-miRf10504-akr:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcg 92
|||||||||||||||||||||
Sbjct: 131 accgacggaattaatccgtcg 111
>52258_ptc-miRf10436-akr:pmrd
Length = 152
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 75 gacggaattaatccgtcggta 95
|||||||||||||||||||||
Sbjct: 80 gacggaattaatccgtcggta 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcg 92
|||||||||||||||||||||
Sbjct: 141 accgacggaattaatccgtcg 121
>52251_ptc-miRf10429-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 74 caccgacggaatttttccgtcggtaaaac 102
>52130_ptc-miRf10308-akr:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 70 tcaccgacggaattaatccgtcggtaaaa 98
|||||||| |||||| |||||||||||||
Sbjct: 33 tcaccgacagaattagtccgtcggtaaaa 5
>52092_ptc-miRf10270-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaatttttccgtcggtaaaac 100
>51874_ptc-miRf10052-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 71 caccgacggaattaatccgtcggtaaaac 99
||||||||||||| ||||||||||||||
Sbjct: 72 caccgacggaatttttccgtcggtaaaac 100
>54293_ptc-miRf12471-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||| ||||||||||||
Sbjct: 45 accgacggaataaatccgtcggta 68
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>53693_ptc-miRf11871-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 6 accgacggatcacttccgtcggtgagtccgtcggta 41
||||||||| || |||||||||||| ||| ||||||
Sbjct: 47 accgacggagcatttccgtcggtgattccatcggta 12
>53325_ptc-miRf11503-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||||| ||||||||||
Sbjct: 9 accgacggaattattccgtcggta 32
>52542_ptc-miRf10720-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||||| ||||||||||
Sbjct: 98 accgacggaattagtccgtcggta 75
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 72 accgacggaattaatccgtcggta 95
||||||||||||| ||||||||||
Sbjct: 101 accgacggaattattccgtcggta 78
