miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 87.7 bits (44), Expect = 1e-18
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 88 ttattaaacccggtccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 29
Query: 70 ccggttcgggtttgttaaaagaccggct 97
||||| ||||||| |||||||||||||
Sbjct: 28 ccggtccgggtttaataaaagaccggct 1
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 85.7 bits (43), Expect = 5e-18
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 87 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 28
Query: 70 ccggttcgggtttgttaaaagaccggc 96
||||| ||||||| ||||||||||||
Sbjct: 27 ccggtccgggtttaataaaagaccggc 1
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 81.8 bits (41), Expect = 9e-17
Identities = 74/85 (87%)
Strand = Plus / Minus
Query: 9 attattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgg 68
|||||||||||||| ||||||||| ||||||||||||||||||| || ||||||||
Sbjct: 85 attattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgg 26
Query: 69 accggttcgggtttgttaaaagacc 93
|||||| ||||||| |||||||||
Sbjct: 25 accggtccgggtttaataaaagacc 1
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 75.8 bits (38), Expect = 5e-15
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 13 ttaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctggaccg 72
||||||||||| ||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct: 81 ttaaacccggaccggcccggcgggtcgacccgggacccggtcgacccggtggctggaccg 22
Query: 73 gttcgggttt 82
|| |||||||
Sbjct: 21 gtccgggttt 12
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||| | || ||||||||||
Sbjct: 78 ttattaaacccggtccggcccggcgggtcgacccgggacccgatcgacccagtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| ||||||||||||||||||| || |||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcgacccgggacccggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
|||||||||||| ||||||||| ||||||||||||||||| | || |||||||||
Sbjct: 87 ttattaaacccgacccggcccggcgggtcgacccgggacccgatcgacccggtggctgga 28
Query: 70 ccggttcgggtttgttaaaagaccggc 96
||||| ||||||| ||||||||||||
Sbjct: 27 ccggtccgggtttaataaaagaccggc 1
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 65.9 bits (33), Expect = 5e-12
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| |||||||| ||||||||||||||||||| || |||||||||
Sbjct: 84 ttattaaacccggtctggcccggcgggtcgacccgggacccggtcgacccggtggctgga 25
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 24 ccggtccgggttt 12
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 65.9 bits (33), Expect = 5e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 8 tattattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctg 67
|||||||| |||||| |||||||| |||||||||||||||||| || ||||||||
Sbjct: 89 tattattacacccggcctggcccggcgagtcgacccgggacccggtcgacccagtggctg 30
Query: 68 gaccggttcgggtttgttaaaagac 92
||||||| ||||||| ||||||||
Sbjct: 29 gaccggtccgggtttaataaaagac 5
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 5e-12
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||||||| |||| |||||||||||||| || |||||||||
Sbjct: 78 ttattaaacccggcccggcccggcgggtcaacccgggacccggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 72 ttattaaacccggcccggcccggcgggtcgacccgggacccggt 29
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 4 ttattaaacccggcccggcccggcgggtcgacccgggacccggt 47
>52624_ptc-miRf10802-akr:pmrd
Length = 78
Score = 61.9 bits (31), Expect = 8e-11
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccgg 52
|||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 1 ttattaaacccggaccggcccggcgggtcgactcgggacccgg 43
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 77/90 (85%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 5 cagtattattaaacccggatcggcccggcaggtcgacccgggacccggt-tatcctagtg 63
|||||||||||||||||| || ||| || ||||||||||||||| ||| |||| |||
Sbjct: 89 cagtattattaaacccggcccgacccagcgggtcgacccgggacctggtcgatcc-ggtg 31
Query: 64 gctggaccggttcgggtttgttaaaagacc 93
||||||||||| ||||||| |||||||||
Sbjct: 30 gctggaccggtccgggtttactaaaagacc 1
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccg 51
||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 84 ttattaaacccggcccggcccggcgggtcgacccgggacccg 43
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 65/74 (87%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggt-tatcctagtggctgg 68
||||||||||||| |||||||||||||||| || ||||||||| |||| ||||||||
Sbjct: 81 ttattaaacccggcccggcccggcaggtcgatccaggacccggtcgatcc-ggtggctgg 23
Query: 69 accggttcgggttt 82
|||||| |||||||
Sbjct: 22 accggtccgggttt 9
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| | ||||||| |||||||||||||| |||| || |||||||||
Sbjct: 78 ttattaaacccggcccagcccggcgggtcgacccgggactcggtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 63 ggctggaccggttcgggtttgttaaaagaccgg 95
|||||||||||||||||||||| ||||||||||
Sbjct: 91 ggctggaccggttcgggtttgtcaaaagaccgg 59
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 13 ttaaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||| ||| ||||||||| |||||||||||||||||||
Sbjct: 72 ttaaacctggaccggcccggcgggtcgacccgggacccggt 32
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||| ||| ||||||||| |||||||||||||||| || || |||||||||
Sbjct: 78 ttattaaactcggcccggcccggcgggtcgacccgggacccagtcgacccggtggctgga 19
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 18 ccggtccgggttt 6
>52133_ptc-miRf10311-akr:pmrd
Length = 122
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 27 gcccggcaggtcgacccgggacccggttatcctagtggctggaccggttcgggtttgtta 86
||||||| |||||||||||||||||| || ||||||| || ||||| |||||||| |
Sbjct: 7 gcccggctggtcgacccgggacccggccgacccagtggctagatcggtttgggtttgtca 66
Query: 87 aaagaccgg 95
|||||||||
Sbjct: 67 aaagaccgg 75
>52132_ptc-miRf10310-akr:pmrd
Length = 122
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 27 gcccggcaggtcgacccgggacccggttatcctagtggctggaccggttcgggtttgtta 86
||||||| |||||||||||||||||| || ||||||| || ||||| |||||||| |
Sbjct: 7 gcccggctggtcgacccgggacccggccgacccagtggctagatcggtttgggtttgtca 66
Query: 87 aaagaccgg 95
|||||||||
Sbjct: 67 aaagaccgg 75
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| |||||||||||||||||||||
Sbjct: 4 ttattaaacccggcccggcccggcaggtcgacccgg 39
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 72/87 (82%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
|||||||||| || ||||||||| ||| |||| |||| ||||| || |||||||||
Sbjct: 87 ttattaaacctggtccggcccggcgggtagacctgggatccggtcgacccggtggctgga 28
Query: 70 ccggttcgggtttgttaaaagaccggc 96
||||| ||||||| ||||||||||||
Sbjct: 27 ccggtccgggtttaataaaagaccggc 1
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 3 agcagtattattaaacccggatcggcccggcaggtcgacccgg 45
|||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 1 agcagtgttattaaacccggcccggcccagcaggtcgacccgg 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggct 97
|||||||||||||| ||||||| |||||||||||||
Sbjct: 43 gtggctggaccggtccgggtttaataaaagaccggct 79
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 15 aaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||| | ||||||||| |||||||||||||||||||
Sbjct: 136 aaacccgaaccggcccggcgggtcgacccgggacccggt 98
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 8 tattattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||||| |||||||||| ||||||||||
Sbjct: 2 tattattaaacccggcccggcccggcaagtcgacccgg 39
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 8 tattattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctg 67
|||||| ||||||||||||||| || ||||||| || ||||||| || ||||||
Sbjct: 85 tattatcaaacccggatcggcctagcgggtcgacttggaacccggtcgacccgatggctg 26
Query: 68 gaccggttcgggtttgttaaaagac 92
||||||| || ||||||||||||||
Sbjct: 25 gaccggtccgagtttgttaaaagac 1
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggct 97
|||||||||||||| |||||| ||||||||||||||
Sbjct: 100 gtggctggaccggtctgggtttattaaaagaccggct 64
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| ||||| || |||||| ||||||||||| | || |||||||||
Sbjct: 4 ttattaaacccggcccggcctggtgggtcgaatcgggacccggtcaacccggtggctgga 63
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 64 ccggtccgggttt 76
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggct 97
|||||||||||||| ||||||| |||||||||||||
Sbjct: 53 gtggctggaccggtccgggtttaataaaagaccggct 89
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggc 96
|||||||||||||| ||||||| ||||||||||||
Sbjct: 36 gtggctggaccggtccgggtttaataaaagaccggc 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||| ||| ||||||||| |||||||||||
Sbjct: 71 ttattaaactcggcccggcccggcgggtcgacccgg 36
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 72 ttattaaacccggtccggcccggcgggtcgacccaagacccggt 29
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||| |||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgacccgg 27
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||| |||||||||||
Sbjct: 68 ttattaaacccggcccggcccggcgggtcgacccgg 33
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagacc 93
|||||||||||||| ||||||| |||||||||
Sbjct: 33 gtggctggaccggtccgggtttaataaaagacc 1
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||| |||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgacccgg 27
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||| |||||||||||
Sbjct: 62 ttattaaacccggcccggcccggcgggtcgacccgg 27
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||||||| |||||||
Sbjct: 62 ttattaaacccggcccggcccggcaggttgacccgg 27
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggc 96
||||||||||||||||| |||| |||||||| ||||
Sbjct: 33 gtggctggaccggttcgagtttattaaaagatcggc 68
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccggc 96
|||||||||||||| ||||||| ||||||||||||
Sbjct: 49 gtggctggaccggtccgggtttaataaaagaccggc 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacc 49
||||||||||||| ||||| || |||||||||||||||
Sbjct: 7 ttattaaacccggcccggcctggtgggtcgacccgggacc 46
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccg 44
||||||||||||| ||||||||| ||||||||||
Sbjct: 66 ttattaaacccggcccggcccggcgggtcgacccg 32
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccg 44
||||||||||||| ||||||||| ||||||||||
Sbjct: 4 ttattaaacccggcccggcccggcgggtcgacccg 38
>52394_ptc-miRf10572-akr:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccgg 95
|||||| ||||||| | ||||||||||||||||||
Sbjct: 26 gtggctagaccggtcctggtttgttaaaagaccgg 60
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagaccg 94
|||||||||||||| ||||||| ||||||||||
Sbjct: 34 gtggctggaccggtccgggtttaataaaagaccg 1
>54357_ptc-miRf12535-akr:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagacc 93
|||||||||||||| ||||||| |||||||||
Sbjct: 33 gtggctggaccggtccgggtttaataaaagacc 1
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagacc 93
|||||||||||||| ||||||| |||||||||
Sbjct: 46 gtggctggaccggtccgggtttaataaaagacc 78
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 7e-05
Identities = 61/73 (83%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggttatcctagtggctgga 69
||||||||||||| | | ||||| ||||||||||||||| ||| || |||||||||
Sbjct: 86 ttattaaacccggcccaggccggcgggtcgacccgggacc-ggtcgacccggtggctgga 28
Query: 70 ccggttcgggttt 82
||||| |||||||
Sbjct: 27 ccggtccgggttt 15
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagacc 93
|||||||||||||| ||||||| |||||||||
Sbjct: 33 gtggctggaccggtccgggtttaataaaagacc 1
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||| ||| |||||||||||
Sbjct: 68 ttattaaacccggcccggcctggcgggtcgacccgg 33
>52345_ptc-miRf10523-akr:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 64 gctggaccggttcgggtttgttaaaagaccggc 96
||||||||| |||||||||| |||||||||||
Sbjct: 94 gctggaccgattcgggtttgccaaaagaccggc 62
>52252_ptc-miRf10430-akr:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 7e-05
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 35 ggtcgacccgggacccggttatcctagtggctggaccggttcgggtttgttaaaagaccg 94
|||||||||||||| |||| | || || |||||| || || |||||||| |||||||||
Sbjct: 112 ggtcgacccgggactcggtcaacccggtagctggatcgttttgggtttgtcaaaagaccg 53
Query: 95 g 95
|
Sbjct: 52 g 52
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 7e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 61 gtggctggaccggttcgggtttgttaaaagacc 93
||||||||||| || ||||||||| ||||||||
Sbjct: 21 gtggctggaccagtccgggtttgtcaaaagacc 53
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgggacccggt 53
||||||||||| | ||||||| | || ||||||||||||||||
Sbjct: 75 ttattaaaccctgcccggcccgaccggccgacccgggacccggt 32
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 10 ttattaaacccggatcggcccggcaggtcgacccgg 45
||||||||||||| ||||||||| |||||| ||||
Sbjct: 65 ttattaaacccggcccggcccggcgggtcgatccgg 30
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 61 gtggctggaccggttcgggtttgttaaaagac 92
|||||||||||||| ||||||| ||||||||
Sbjct: 33 gtggctggaccggtccgggtttaataaaagac 2
