miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>52589_ptc-miRf10767-akr:pmrd
Length = 155
Score = 214 bits (108), Expect = 2e-56
Identities = 138/148 (93%)
Strand = Plus / Minus
Query: 8 tttgtttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttg 67
|||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct: 151 tttgtttcccggaattcactttccgggaagccactttccaaactttcctgtgtttgtctg 92
Query: 68 acatttgaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatt 127
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 91 ccattagaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttagcttggtt 32
Query: 128 tccaggaaagtgttttcctggaaaattt 155
||||||||||||||||||| ||||||||
Sbjct: 31 tccaggaaagtgttttccttgaaaattt 4
>53871_ptc-miRf12049-akr:pmrd
Length = 140
Score = 206 bits (104), Expect = 5e-54
Identities = 131/140 (93%)
Strand = Plus / Minus
Query: 12 tttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacat 71
|||| ||||||||||||||| ||||| || ||||||||||||| | |||||||||| |||
Sbjct: 140 tttcccggaattcactttccaggaaaccactttccaaactttcttttgtttgtttgccat 81
Query: 72 ttgaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttcca 131
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80 tagaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttggtttcca 21
Query: 132 ggaaagtgttttcctggaaa 151
||||||||||||||||||||
Sbjct: 20 ggaaagtgttttcctggaaa 1
>53870_ptc-miRf12048-akr:pmrd
Length = 140
Score = 206 bits (104), Expect = 5e-54
Identities = 131/140 (93%)
Strand = Plus / Minus
Query: 12 tttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacat 71
|||| ||||||||||||||| ||||| || ||||||||||||| | |||||||||| |||
Sbjct: 140 tttcccggaattcactttccaggaaaccactttccaaactttcttttgtttgtttgccat 81
Query: 72 ttgaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttcca 131
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80 tagaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttggtttcca 21
Query: 132 ggaaagtgttttcctggaaa 151
||||||||||||||||||||
Sbjct: 20 ggaaagtgttttcctggaaa 1
>52389_ptc-miRf10567-akr:pmrd
Length = 140
Score = 206 bits (104), Expect = 5e-54
Identities = 131/140 (93%)
Strand = Plus / Minus
Query: 12 tttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacat 71
|||| ||||||||||||||| ||||| || ||||||||||||| | |||||||||| |||
Sbjct: 140 tttcccggaattcactttccaggaaaccactttccaaactttcttttgtttgtttgccat 81
Query: 72 ttgaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttcca 131
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 80 tagaaaagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttggtttcca 21
Query: 132 ggaaagtgttttcctggaaa 151
||||||||||||||||||||
Sbjct: 20 ggaaagtgttttcctggaaa 1
>52118_ptc-miRf10296-akr:pmrd
Length = 140
Score = 202 bits (102), Expect = 9e-53
Identities = 126/134 (94%)
Strand = Plus / Minus
Query: 18 ggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaa 77
|||||||||||||||||||| || ||||||||||||||||||||| |||| || | | ||
Sbjct: 134 ggaattcactttccgggaaaccactttccaaactttcctgtgtttatttgccactaggaa 75
Query: 78 agttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaag 137
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 74 agttggtcaacggaaaacactttccagtcaaaggaaaatttggcttggtttccaggaaag 15
Query: 138 tgttttcctggaaa 151
||||||||||||||
Sbjct: 14 tgttttcctggaaa 1
>51977_ptc-miRf10155-akr:pmrd
Length = 140
Score = 194 bits (98), Expect = 2e-50
Identities = 122/130 (93%)
Strand = Plus / Minus
Query: 18 ggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaa 77
|||||||||||||| |||| || |||||||||||||||||||||||||| |||| ||||
Sbjct: 134 ggaattcactttccaagaaaccactttccaaactttcctgtgtttgtttgccattagaaa 75
Query: 78 agttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaag 137
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 74 agttggtcaacggaaaacactttccagtcaaagaaaaatttggcttggtttccaggaaag 15
Query: 138 tgttttcctg 147
||||||||||
Sbjct: 14 tgttttcctg 5
>54212_ptc-miRf12390-akr:pmrd
Length = 141
Score = 182 bits (92), Expect = 8e-47
Identities = 125/136 (91%)
Strand = Plus / Minus
Query: 17 cggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaa 76
||||||| ||||||| ||||| || |||||||| |||||||||||||||||||||| | |
Sbjct: 136 cggaatttactttcctggaaaccactttccaaattttcctgtgtttgtttgacattagga 77
Query: 77 aagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 76 aagttggtcaatggaaaacactttccaatcaaaggaaaatttggcttggtttccaggaaa 17
Query: 137 gtgttttcctggaaaa 152
|||||||| |||||||
Sbjct: 16 gtgttttcatggaaaa 1
>53949_ptc-miRf12127-akr:pmrd
Length = 128
Score = 182 bits (92), Expect = 8e-47
Identities = 119/128 (92%)
Strand = Plus / Minus
Query: 18 ggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaa 77
|||||||||||||||||||| || ||||||||||||||||||||| |||| || | ||||
Sbjct: 128 ggaattcactttccgggaaaccactttccaaactttcctgtgtttatttgccactagaaa 69
Query: 78 agttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaag 137
||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||
Sbjct: 68 agttggtcaacggaaaacacttttcagtcaaagaaaaatttggcttggtttccaggaaag 9
Query: 138 tgttttcc 145
||||||||
Sbjct: 8 tgttttcc 1
>53446_ptc-miRf11624-akr:pmrd
Length = 137
Score = 178 bits (90), Expect = 1e-45
Identities = 123/134 (91%)
Strand = Plus / Plus
Query: 17 cggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaa 76
||||||| ||||||| ||||| || |||||||| |||||||||||||||||||||| | |
Sbjct: 4 cggaatttactttcctggaaaccactttccaaattttcctgtgtttgtttgacattagga 63
Query: 77 aagttggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 64 aagttggtcaatggaaaacactttccaatcaaaggaaaatttggcttggtttccaggaaa 123
Query: 137 gtgttttcctggaa 150
|||||||| |||||
Sbjct: 124 gtgttttcatggaa 137
>53744_ptc-miRf11922-akr:pmrd
Length = 128
Score = 161 bits (81), Expect = 3e-40
Identities = 111/121 (91%)
Strand = Plus / Minus
Query: 25 actttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggt 84
||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||| |
Sbjct: 121 actttccgggaaaccactttccaaactttcctgtgtttgtttgctattagaaaagttgat 62
Query: 85 caacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgttttc 144
||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 61 caacgaaaaatactttccagtcaaagaaaaatttggcttggtttccaggaaagtgttttc 2
Query: 145 c 145
|
Sbjct: 1 c 1
>51902_ptc-miRf10080-akr:pmrd
Length = 178
Score = 147 bits (74), Expect = 4e-36
Identities = 110/122 (90%)
Strand = Plus / Plus
Query: 25 actttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggt 84
||||||||||||| || |||||||||||||| |||||||||| |||| ||||||||||
Sbjct: 15 actttccgggaaaccactttccaaactttcccatgtttgtttgccattaaaaaagttggt 74
Query: 85 caacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgttttc 144
|||||||||||||||| ||||||||| ||||||||||||| ||| ||||||| |||||||
Sbjct: 75 caacggaaaacacttttcagtcaaagaaaaatttggcttggttttcaggaaaatgttttc 134
Query: 145 ct 146
||
Sbjct: 135 ct 136
>53899_ptc-miRf12077-akr:pmrd
Length = 126
Score = 143 bits (72), Expect = 7e-35
Identities = 102/112 (91%)
Strand = Plus / Minus
Query: 33 ggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacggaa 92
||||| || ||||||||||||||||| |||||||| |||| |||||||||||||||| ||
Sbjct: 112 ggaaaccactttccaaactttcctgtatttgtttgtcattagaaaagttggtcaacgaaa 53
Query: 93 aacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgttttc 144
||||||||| ||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 52 aacactttctagtcaaaggaaaatttggcttcgtttccaggacagtgttttc 1
>52852_ptc-miRf11030-akr:pmrd
Length = 114
Score = 133 bits (67), Expect = 7e-32
Identities = 100/111 (90%)
Strand = Plus / Minus
Query: 5 atgtttgtttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgt 64
|||||||||| |||||||| ||||||| |||| || ||| |||||||||||||||||||
Sbjct: 114 atgtttgttttccggaattcgctttccgagaaaccacttttcaaactttcctgtgtttgt 55
Query: 65 ttgacatttgaaaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
||| |||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 54 ttgccattagaaaagttggtcaacggaaaacactttccggtcaacggaaaa 4
>52002_ptc-miRf10180-akr:pmrd
Length = 115
Score = 119 bits (60), Expect = 1e-27
Identities = 103/116 (88%), Gaps = 1/116 (0%)
Strand = Plus / Minus
Query: 24 cactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttgg 83
|||||||||||||| || ||||||||||||||| |||||||||| |||| | |||| |||
Sbjct: 115 cactttccgggaaaccactttccaaactttcctatgtttgtttgccattaggaaagctgg 56
Query: 84 tcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtg 139
||||| | |||||||||| |||||||| ||||||||| ||| ||||||||||||||
Sbjct: 55 tcaacag-aaacactttctagtcaaagaaaaatttggtttggtttccaggaaagtg 1
>53991_ptc-miRf12169-akr:pmrd
Length = 97
Score = 107 bits (54), Expect = 4e-24
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||||||||| || ||||||||||||||||| |||||||| |||| | |||| ||||||
Sbjct: 82 tttccgggaaaccactttccaaactttcctgtatttgtttgtcattaggaaaggtggtca 23
Query: 87 acggaaaacactttccagtcaa 108
||||||||||||||||||||||
Sbjct: 22 acggaaaacactttccagtcaa 1
>53893_ptc-miRf12071-akr:pmrd
Length = 99
Score = 107 bits (54), Expect = 4e-24
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||||||||| || |||||||||||||||||||||||||| |||| | |||||||||||
Sbjct: 83 tttccgggaaaccactttccaaactttcctgtgtttgtttgccattaggaaagttggtca 24
Query: 87 acggaaaacactttccagtcaa 108
|| ||||||||||||| |||||
Sbjct: 23 acagaaaacactttccggtcaa 2
>53786_ptc-miRf11964-akr:pmrd
Length = 99
Score = 107 bits (54), Expect = 4e-24
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 31 cgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacgg 90
||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||| |
Sbjct: 79 cgggaaaccactttccaaactttcctgtgtttgtttgtcattagaaaagttggtcaacag 20
Query: 91 aaaacactttccagtcaa 108
|||||||||||| |||||
Sbjct: 19 aaaacactttccggtcaa 2
>53785_ptc-miRf11963-akr:pmrd
Length = 99
Score = 107 bits (54), Expect = 4e-24
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 31 cgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacgg 90
||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||| |
Sbjct: 79 cgggaaaccactttccaaactttcctgtgtttgtttgtcattagaaaagttggtcaacag 20
Query: 91 aaaacactttccagtcaa 108
|||||||||||| |||||
Sbjct: 19 aaaacactttccggtcaa 2
>51880_ptc-miRf10058-akr:pmrd
Length = 151
Score = 105 bits (53), Expect = 1e-23
Identities = 62/65 (95%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||
Sbjct: 109 ggtcaacggaaaacactttccagtcaaagaaaaatttggtttgatttctaggaaagtgtt 50
Query: 142 ttcct 146
|||||
Sbjct: 49 ttcct 45
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaaaggaaa 114
|||||||||||||||||||||| ||||| |||||
Sbjct: 151 tggtcaacggaaaacactttccggtcaacggaaa 118
>53742_ptc-miRf11920-akr:pmrd
Length = 114
Score = 103 bits (52), Expect = 6e-23
Identities = 91/104 (87%)
Strand = Plus / Minus
Query: 5 atgtttgtttctcggaattcactttccgggaaatcattttccaaactttcctgtgtttgt 64
||||||||||| ||||| | ||||||| ||| || |||| ||||||||||||||||||
Sbjct: 114 atgtttgtttcccggaaagtagtttccggaaaaccactttctaaactttcctgtgtttgt 55
Query: 65 ttgacatttgaaaagttggtcaacggaaaacactttccagtcaa 108
||| |||| | ||||||||||||||||||||||||||| |||||
Sbjct: 54 ttgccattaggaaagttggtcaacggaaaacactttccggtcaa 11
>52983_ptc-miRf11161-akr:pmrd
Length = 114
Score = 99.6 bits (50), Expect = 9e-22
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||| ||||| || |||||||||||||||||||||||||| |||| | |||| ||||||
Sbjct: 92 tttcccggaaaccactttccaaactttcctgtgtttgtttgccattaggaaaggtggtca 33
Query: 87 acggaaaacactttccagtcaa 108
|||||||||||||||| |||||
Sbjct: 32 acggaaaacactttccggtcaa 11
>53331_ptc-miRf11509-akr:pmrd
Length = 107
Score = 97.6 bits (49), Expect = 4e-21
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 18 ggaattcactttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaa 77
|||||||||||| ||||||| || |||||||||||||||||||||||||| ||| ||||
Sbjct: 107 ggaattcacttttcgggaaaccactttccaaactttcctgtgtttgtttgccataagaaa 48
Query: 78 agttggtcaacggaaaa 94
|||||||||||| ||||
Sbjct: 47 agttggtcaacgaaaaa 31
Score = 60.0 bits (30), Expect = 8e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 112 aaaatttggcttgatttccaggaaagtgttttcc 145
||||||||||||| ||||||||||||||||||||
Sbjct: 34 aaaatttggcttggtttccaggaaagtgttttcc 1
>51914_ptc-miRf10092-akr:pmrd
Length = 157
Score = 97.6 bits (49), Expect = 4e-21
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||| ||||| || |||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 144 tttccaggaaaccactttccaaactttcctgtgtttgtttgccattagaaaagttggtca 85
Query: 87 acggaaaacactttccagtcaaaggaaaa 115
| | |||||||||||| |||| ||||||
Sbjct: 84 atgaaaaacactttccgatcaacggaaaa 56
Score = 69.9 bits (35), Expect = 8e-13
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 84 tcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccagga 134
|||||||||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct: 66 tcaacggaaaacactttccagtcaaa-gaaaatttgacttggtttccagga 17
>53673_ptc-miRf11851-akr:pmrd
Length = 106
Score = 95.6 bits (48), Expect = 1e-20
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 42 tttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacggaaaacactttc 101
||||||||||||| |||||||||||| ||| | ||||||||||||||||||||||||||
Sbjct: 35 tttccaaactttcatgtgtttgtttgttattaggaaagttggtcaacggaaaacactttc 94
Query: 102 cagtcaaa 109
||||||||
Sbjct: 95 cagtcaaa 102
>53301_ptc-miRf11479-akr:pmrd
Length = 113
Score = 95.6 bits (48), Expect = 1e-20
Identities = 69/76 (90%)
Strand = Plus / Minus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||||||||| || |||||||||||||||||||||||||| || | |||||||||||
Sbjct: 99 tttccgggaaaccactttccaaactttcctgtgtttgtttgccacgaggaaagttggtca 40
Query: 87 acggaaaacactttcc 102
||||||||||||||||
Sbjct: 39 acggaaaacactttcc 24
>52530_ptc-miRf10708-akr:pmrd
Length = 117
Score = 95.6 bits (48), Expect = 1e-20
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 27 tttccgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtca 86
||||||||||| || |||||||||||||||||||||||||| || | |||||||||||
Sbjct: 17 tttccgggaaaccactttccaaactttcctgtgtttgtttgccacgaggaaagttggtca 76
Query: 87 acggaaaacactttcc 102
||||||||||||||||
Sbjct: 77 acggaaaacactttcc 92
>52140_ptc-miRf10318-akr:pmrd
Length = 144
Score = 95.6 bits (48), Expect = 1e-20
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||
Sbjct: 115 ggtcaacggaaaacactttccagtcaaagaaaaatttggtttggtttccaggaaaatgtt 56
Query: 142 ttcc 145
||||
Sbjct: 55 ttcc 52
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 142 aaagttggtcaacggaaaacactttccggtcaacggaaaa 103
>52935_ptc-miRf11113-akr:pmrd
Length = 78
Score = 93.7 bits (47), Expect = 6e-20
Identities = 72/79 (91%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 113 aaatttggcttgatttccaggaaagtgttttcctggaaaatttgggtggaaaacaatttc 172
|||||||||||||||||||||||||||||||||| | |||||| |||||||| ||||
Sbjct: 1 aaatttggcttgatttccaggaaagtgttttcct-tttattttgggcggaaaacactttc 59
Query: 173 cggaagttgtgaaaaattt 191
|||||||||||||||||||
Sbjct: 60 cggaagttgtgaaaaattt 78
>53306_ptc-miRf11484-akr:pmrd
Length = 96
Score = 91.7 bits (46), Expect = 2e-19
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 43 ttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacggaaaacactttcc 102
||||||||||||||||||||| ||| | || | |||||||||||||||||||||||||||
Sbjct: 66 ttccaaactttcctgtgtttgcttgcctttaggaaagttggtcaacggaaaacactttcc 7
Query: 103 agtcaa 108
||||||
Sbjct: 6 agtcaa 1
>54077_ptc-miRf12255-akr:pmrd
Length = 143
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
|||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||
Sbjct: 115 ggtcaacggaaaacactttccagtcaaaaaaaattttggtttggtttccaggaaagtgtt 56
Query: 142 ttcc 145
||||
Sbjct: 55 ttcc 52
Score = 52.0 bits (26), Expect = 2e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 74 gaaaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 143 gaaaagttggtcaacgg-aaacactttccggtcaacggaaaa 103
>54076_ptc-miRf12254-akr:pmrd
Length = 151
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
|||||||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||
Sbjct: 119 ggtcaacggaaaacactttccagtcaaaaaaaattttggtttggtttccaggaaagtgtt 60
Query: 142 ttcc 145
||||
Sbjct: 59 ttcc 56
Score = 52.0 bits (26), Expect = 2e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 74 gaaaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 147 gaaaagttggtcaacgg-aaacactttccggtcaacggaaaa 107
>52319_ptc-miRf10497-akr:pmrd
Length = 138
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||| ||||
Sbjct: 27 ggtcaacggaaaacactttccagtcaaagaaaaatttggtttggtttccagaaaaatgtt 86
Query: 142 ttcc 145
||||
Sbjct: 87 ttcc 90
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 77 aagttggtcaacggaaaacactttccagtcaaaggaaaa 115
|||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1 aagttggtcaacggaaaacactttccggtcaacggaaaa 39
>51908_ptc-miRf10086-akr:pmrd
Length = 164
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
|||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| ||||
Sbjct: 115 ggtcaacggaaaacactttccagtcaaaaaaaaatttggtttggtttccaggaaaatgtt 56
Query: 142 ttcc 145
||||
Sbjct: 55 ttcc 52
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaa 108
|||||||||||||||||||||||||||||||||
Sbjct: 162 aaagttggtcaacggaaaacactttccagtcaa 130
>51859_ptc-miRf10037-akr:pmrd
Length = 133
Score = 87.7 bits (44), Expect = 3e-18
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
|||||||| |||||||||| ||||||||| |||||||| ||||||||| |||||||||||
Sbjct: 110 ggtcaacgaaaaacacttttcagtcaaagaaaaatttgacttgatttcaaggaaagtgtt 51
Query: 142 ttcc 145
||||
Sbjct: 50 ttcc 47
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 84 tcaacggaaaacactttccagtcaa 108
||||||||||||||||||| |||||
Sbjct: 129 tcaacggaaaacactttccggtcaa 105
>52896_ptc-miRf11074-akr:pmrd
Length = 106
Score = 83.8 bits (42), Expect = 5e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 33 ggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacggaa 92
||||| || |||| |||||||| || ||||||||| |||| ||||||||||||||| |||
Sbjct: 26 ggaaaccactttctaaactttcatgcgtttgtttgtcattagaaaagttggtcaacagaa 85
Query: 93 aacactttccagtcaaag 110
|||| |||||||||||||
Sbjct: 86 aacattttccagtcaaag 103
>52895_ptc-miRf11073-akr:pmrd
Length = 101
Score = 83.8 bits (42), Expect = 5e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 31 cgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacgg 90
||||||| || |||| |||||||| |||||||||||| |||| | ||| |||||||||||
Sbjct: 80 cgggaaaccactttctaaactttcttgtgtttgtttgccattaggaaaattggtcaacgg 21
Query: 91 aaaacactttccagtcaa 108
|||||||||||| |||||
Sbjct: 20 aaaacactttccggtcaa 3
>52894_ptc-miRf11072-akr:pmrd
Length = 114
Score = 83.8 bits (42), Expect = 5e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 31 cgggaaatcattttccaaactttcctgtgtttgtttgacatttgaaaagttggtcaacgg 90
||||||| || |||| |||||||| |||||||||||| |||| | ||| |||||||||||
Sbjct: 88 cgggaaaccactttctaaactttcttgtgtttgtttgccattaggaaaattggtcaacgg 29
Query: 91 aaaacactttccagtcaa 108
|||||||||||| |||||
Sbjct: 28 aaaacactttccggtcaa 11
>52395_ptc-miRf10573-akr:pmrd
Length = 166
Score = 83.8 bits (42), Expect = 5e-17
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaaa-ggaaaatttggcttgatttccaggaaagtg 139
|||| |||||||||||||||||||||||| |||||||||| |||| ||| ||||||||||
Sbjct: 117 tggttaacggaaaacactttccagtcaaaaggaaaatttgacttggttttcaggaaagtg 58
Query: 140 ttttcc 145
||||||
Sbjct: 57 ttttcc 52
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
|||| |||||||||||||||||||||| ||||||| ||||
Sbjct: 164 aaaggtggtcaacggaaaacactttccggtcaaagaaaaa 125
>52890_ptc-miRf11068-akr:pmrd
Length = 92
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgt 140
|||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 73 tggtcaacaaaaaatactttccagttaaaggaaaatttggcttgggttccaggaaagtgt 14
Query: 141 tttcc 145
|||||
Sbjct: 13 tttcc 9
>53153_ptc-miRf11331-akr:pmrd
Length = 143
Score = 79.8 bits (40), Expect = 9e-16
Identities = 58/64 (90%)
Strand = Plus / Plus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||| | ||
Sbjct: 29 ggtcaacagaaaacactttccagtcaaagaaaaatttggtttggtttccaggaaaatatt 88
Query: 142 ttcc 145
||||
Sbjct: 89 ttcc 92
>51961_ptc-miRf10139-akr:pmrd
Length = 144
Score = 79.8 bits (40), Expect = 9e-16
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||||||||||||||||||||||||| | ||||||| || |||||||||||||||
Sbjct: 115 ggtcaacggaaaacactttccagtcaaagaacaatttggtttagattccaggaaagtgtt 56
Query: 142 ttcc 145
||||
Sbjct: 55 ttcc 52
Score = 63.9 bits (32), Expect = 5e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaaaggaaaa 115
||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 142 aaagttggtcaacggaaaacactttccggtcaacggaaaa 103
>53122_ptc-miRf11300-akr:pmrd
Length = 144
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||| ||||||||| ||||||||| ||| |||||||||||
Sbjct: 115 ggtcaacgaaaaacacttttcagtcaaagaaaaatttggtttggtttccaggaaa 61
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaa 108
||||||||||||||||||||||||||| |||||
Sbjct: 142 aaagttggtcaacggaaaacactttccggtcaa 110
>52524_ptc-miRf10702-akr:pmrd
Length = 131
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||| ||||||||| ||||||||| ||| |||||||||||
Sbjct: 109 ggtcaacgaaaaacacttttcagtcaaagaaaaatttggtttggtttccaggaaa 55
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaa 108
|||||||||||||||||||||| |||||
Sbjct: 131 tggtcaacggaaaacactttccggtcaa 104
>52523_ptc-miRf10701-akr:pmrd
Length = 144
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||| ||||||||| ||||||||| ||| |||||||||||
Sbjct: 115 ggtcaacgaaaaacacttttcagtcaaagaaaaatttggtttggtttccaggaaa 61
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaa 108
||||||||||||||||||||||||||| |||||
Sbjct: 142 aaagttggtcaacggaaaacactttccggtcaa 110
>52110_ptc-miRf10288-akr:pmrd
Length = 131
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||||||||||||| ||||||||| ||| |||| ||||||
Sbjct: 109 ggtcaacgaaaaacactttccagtcaaagaaaaatttggtttggtttctaggaaa 55
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaa 108
|||||||||||||||||||||| |||||
Sbjct: 131 tggtcaacggaaaacactttccggtcaa 104
>52053_ptc-miRf10231-akr:pmrd
Length = 144
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||| ||||||||| ||||||||| ||| |||||||||||
Sbjct: 115 ggtcaacgaaaaacacttttcagtcaaagaaaaatttggtttggtttccaggaaa 61
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaa 108
||||||||||||||||||||||||||| |||||
Sbjct: 142 aaagttggtcaacggaaaacactttccggtcaa 110
>52052_ptc-miRf10230-akr:pmrd
Length = 131
Score = 69.9 bits (35), Expect = 8e-13
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaa 136
|||||||| |||||||||| ||||||||| ||||||||| ||| |||||||||||
Sbjct: 109 ggtcaacgaaaaacacttttcagtcaaagaaaaatttggtttggtttccaggaaa 55
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaa 108
|||||||||||||||||||||| |||||
Sbjct: 131 tggtcaacggaaaacactttccggtcaa 104
>53759_ptc-miRf11937-akr:pmrd
Length = 149
Score = 61.9 bits (31), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaaatttggcttgatttccaggaaagtgtt 141
||||||| |||||||||||||| | ||| ||||||||| ||| ||| ||||||||||||
Sbjct: 117 ggtcaacagaaaacactttccaattaaaaaaaaatttggtttggttttcaggaaagtgtt 58
Query: 142 ttc 144
|||
Sbjct: 57 ttc 55
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 74 gaaaagttggtcaacggaaaacactttccagtcaa 108
||||||||||||||||||||||||||||| |||||
Sbjct: 146 gaaaagttggtcaacggaaaacactttccggtcaa 112
>52909_ptc-miRf11087-akr:pmrd
Length = 115
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 84 tcaacggaaaacactttccagtcaaaggaaaattt 118
||||||||||||||||||||||||||| |||||||
Sbjct: 36 tcaacggaaaacactttccagtcaaagaaaaattt 2
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 90 gaaaacactttccagtcaaaggaaaattt 118
||||||||||||||||||||| |||||||
Sbjct: 86 gaaaacactttccagtcaaagaaaaattt 114
>52487_ptc-miRf10665-akr:pmrd
Length = 152
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 76 aaagttggtcaacggaaaacactttccagtcaaaggaaa 114
||||||||||||||||||||||||||| ||||| |||||
Sbjct: 151 aaagttggtcaacggaaaacactttccggtcaacggaaa 113
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 114 aatttggcttgatttccaggaaagtgttttcct 146
||||||| ||| ||| |||||||||||||||||
Sbjct: 82 aatttggtttggttttcaggaaagtgttttcct 50
>52458_ptc-miRf10636-akr:pmrd
Length = 138
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 76 aaagttggtcaacggaaaacactttccagtcaa 108
||||||||||||||||||||||||||| |||||
Sbjct: 1 aaagttggtcaacggaaaacactttccggtcaa 33
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaa 114
|||||||| ||||||||||| |||||| |||||
Sbjct: 28 ggtcaacgaaaaacactttctagtcaacggaaa 60
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 83 gtcaacggaaaacactttcc 102
||||||||||||||||||||
Sbjct: 70 gtcaacggaaaacactttcc 89
>52085_ptc-miRf10263-akr:pmrd
Length = 161
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaa 114
||||||||||||||||||||||||||| |||||
Sbjct: 119 ggtcaacggaaaacactttccagtcaacggaaa 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 81 tggtcaacggaaaacactttccagtcaaaggaaa 114
|||||||||||||||||||||| ||||| |||||
Sbjct: 161 tggtcaacggaaaacactttccggtcaacggaaa 128
>54023_ptc-miRf12201-akr:pmrd
Length = 66
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 84 tcaacggaaaacactttccagtcaaaggaaa 114
||||||||||||||||||||||||| |||||
Sbjct: 66 tcaacggaaaacactttccagtcaacggaaa 36
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaa 108
|||||||||||||| ||||||||||||
Sbjct: 27 ggtcaacggaaaacgctttccagtcaa 1
>53267_ptc-miRf11445-akr:pmrd
Length = 75
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaa 114
||||||||||||||| ||||||||||| |||||
Sbjct: 72 ggtcaacggaaaacattttccagtcaacggaaa 40
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaa 108
||||||||||||||| |||||||||||
Sbjct: 31 ggtcaacggaaaacattttccagtcaa 5
>51924_ptc-miRf10102-akr:pmrd
Length = 120
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaa 114
||||||||||||||||||||| ||||| |||||
Sbjct: 119 ggtcaacggaaaacactttccggtcaacggaaa 87
>53581_ptc-miRf11759-akr:pmrd
Length = 75
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaa 108
||||||||||||||| |||||||||||
Sbjct: 31 ggtcaacggaaaacattttccagtcaa 5
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 82 ggtcaacggaaaacactttccagtcaaaggaaa 114
|||||||| |||||| ||||||||||| |||||
Sbjct: 72 ggtcaacgaaaaacattttccagtcaacggaaa 40
