miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53984_ptc-miRf12162-akr:pmrd
Length = 94
Score = 83.8 bits (42), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 35 tttccgtcggcaatgtttaccgacagaaataattccgtcggtaagtctgttggtgttatc 94
|||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||
Sbjct: 33 tttccgtcggcaatgtttaccgacggaaataatttcgtcggtaatgccgttggtgttatc 92
Query: 95 cg 96
||
Sbjct: 93 cg 94
>52664_ptc-miRf10842-akr:pmrd
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 15 cagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattccgtcg 74
||||| ||||||||||||||||||||| || ||| |||| ||| |||| ||||||||||
Sbjct: 15 cagattttgagacggaattatttccgttggtaataattacagac-gaaaaaattccgtcg 73
Query: 75 gtaagtctgttggt 88
|||| |||||||||
Sbjct: 74 gtaattctgttggt 87
>53599_ptc-miRf11777-akr:pmrd
Length = 109
Score = 63.9 bits (32), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||||||||||||||||| | |||||||| |||| ||||||
Sbjct: 37 ccgacagattttgagacggaattatttccgtcggtataaattaccgacggaaa-aattcc 95
Query: 71 gtcggtaa 78
||||||||
Sbjct: 96 gtcggtaa 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
||||||||| |||||||||| ||| | ||||||| ||||||||||||||
Sbjct: 98 gacggaatt-tttccgtcggtaatttataccgacggaaataattccgtc 51
>52486_ptc-miRf10664-akr:pmrd
Length = 109
Score = 63.9 bits (32), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||||||||||||||||| | |||||||| |||| ||||||
Sbjct: 73 ccgacagattttgagacggaattatttccgtcggtatatattaccgacggaaa-aattcc 15
Query: 71 gtcggtaa 78
||||||||
Sbjct: 14 gtcggtaa 7
Score = 50.1 bits (25), Expect = 3e-07
Identities = 44/49 (89%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
||||||||| |||||||||| ||| | ||||||| ||||||||||||||
Sbjct: 12 gacggaatt-tttccgtcggtaatatataccgacggaaataattccgtc 59
>52161_ptc-miRf10339-akr:pmrd
Length = 109
Score = 63.9 bits (32), Expect = 2e-11
Identities = 60/68 (88%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| ||||||||||||||| |||||||| | ||||||||||||| ||||||
Sbjct: 73 ccgacagattttgagacggaattatgtccgtcggtataaattaccgacagaaa-aattcc 15
Query: 71 gtcggtaa 78
||||||||
Sbjct: 14 gtcggtaa 7
>53950_ptc-miRf12128-akr:pmrd
Length = 105
Score = 58.0 bits (29), Expect = 1e-09
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
||||||||| |||||||||| ||||| ||||||| ||||||||||||||
Sbjct: 10 gacggaatt-tttccgtcggtaatgtataccgacggaaataattccgtc 57
Score = 56.0 bits (28), Expect = 5e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| |||||||||||||||||||||||| | |||||||| |||| ||||||
Sbjct: 71 ccgaccgattttgagacggaattatttccgtcggtatacattaccgacggaaa-aattcc 13
Query: 71 gtcggtaa 78
||||||||
Sbjct: 12 gtcggtaa 5
>52714_ptc-miRf10892-akr:pmrd
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
||||||||| |||||||||| ||| | ||||||||||||||||||||||
Sbjct: 88 gacggaatt-tttccgtcggtaatatataccgacagaaataattccgtc 41
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| |||||||||||||||||| |||||
Sbjct: 27 ccgacagattttgagacggaattatttctgtcgg 60
>54321_ptc-miRf12499-akr:pmrd
Length = 113
Score = 56.0 bits (28), Expect = 5e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| |||||| ||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-gaaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>53220_ptc-miRf11398-akr:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| ||||||||||||||||| |||||| | |||||||| | |||||||||
Sbjct: 38 ccgacagattttgagacggaattattttcgtcggtatatattaccgac-ggaataattcc 96
Query: 71 gtcggtaa 78
||||||||
Sbjct: 97 gtcggtaa 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
|||||||||||| ||||||| ||| | ||||||| |||||||||||||
Sbjct: 99 gacggaattatt-ccgtcggtaatatataccgacgaaaataattccgtc 52
>54094_ptc-miRf12272-akr:pmrd
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 35 tttccgtcggcaatgtttaccgacagaaataattccgtc 73
|||||||||| ||| | ||||||||||||||||||||||
Sbjct: 79 tttccgtcggtaatttataccgacagaaataattccgtc 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| | |||||||||||||||| |||||
Sbjct: 27 ccgacagatttggagacggaattatttctgtcgg 60
>54123_ptc-miRf12301-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 39 ccgacagattttgagacggaattatgtccgtcgg 72
>53802_ptc-miRf11980-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 39 ccgacagattttgagacggaattatgtccgtcgg 72
>53765_ptc-miRf11943-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 39 ccgacagattttgagacggaattatgtccgtcgg 72
>53764_ptc-miRf11942-akr:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 27 ccgacagattttgagacggaattatgtccgtcgg 60
>53737_ptc-miRf11915-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||| ||| ||||||||||||||||||||||||
Sbjct: 39 ccgaccgattttgagacggaattatttccgtcgg 72
>53627_ptc-miRf11805-akr:pmrd
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 26 ccgacagattttgagacggaattatgtccgtcgg 59
>53626_ptc-miRf11804-akr:pmrd
Length = 128
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 66 ccgacagattttgagacggaattatgtccgtcgg 99
>53322_ptc-miRf11500-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 39 ccgacagattttgagacggaattatgtccgtcgg 72
>53221_ptc-miRf11399-akr:pmrd
Length = 89
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||||| ||||||
Sbjct: 27 ccgacagattttgagacggaattattttcgtcgg 60
Score = 42.1 bits (21), Expect = 7e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Minus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
|||||||||||| ||||||| ||| | ||||||| |||||||||||||
Sbjct: 88 gacggaattatt-ccgtcggtaatatataccgacgaaaataattccgtc 41
>53203_ptc-miRf11381-akr:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 28 ccgacagattttgagacggaattatgtccgtcgg 61
>53099_ptc-miRf11277-akr:pmrd
Length = 113
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 39 ccgacagattttgagacggaattatgtccgtcgg 72
>52690_ptc-miRf10868-akr:pmrd
Length = 106
Score = 52.0 bits (26), Expect = 7e-08
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
||||||||||||||| |||||||||||| |||||||||
Sbjct: 61 ttaccgacagaaata-ttccgtcggtaaatctgttggt 97
>52539_ptc-miRf10717-akr:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 73 ccgacagattttgagacggaattatgtccgtcgg 40
>52502_ptc-miRf10680-akr:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 73 ccgacagattttgagacggaattatgtccgtcgg 40
>52444_ptc-miRf10622-akr:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 73 ccgacagattttgagacggaattatgtccgtcgg 40
>52137_ptc-miRf10315-akr:pmrd
Length = 109
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| ||||||||||||||| ||||||||
Sbjct: 73 ccgacagattttgagacggaattatgtccgtcgg 40
>54231_ptc-miRf12409-akr:pmrd
Length = 137
Score = 50.1 bits (25), Expect = 3e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 21 ttgagacggaattatttccgtcggcaatgtttaccgacagaaataattccgtcggtaagt 80
|||||||||||||| |||||||| || || ||||| |||| |||||||||||||| |
Sbjct: 61 ttgagacggaattagttccgtcgttaaaaatttccgac-gaaaaaattccgtcggtaatt 119
Query: 81 ctgttggtgttatccga 97
| ||||||||| |||||
Sbjct: 120 ccgttggtgttctccga 136
>54168_ptc-miRf12346-akr:pmrd
Length = 146
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
||||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaattattccgtcggtaaatccgttggt 137
>54196_ptc-miRf12374-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| ||||| |||||
Sbjct: 37 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgacggaaat-attcc 95
Query: 71 gtcggtaa 78
|||||||
Sbjct: 96 atcggtaa 103
>54039_ptc-miRf12217-akr:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 38 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 96
Query: 71 gtcggtaa 78
||||||||
Sbjct: 97 gtcggtaa 104
>54014_ptc-miRf12192-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>53295_ptc-miRf11473-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| || ||||| | | |||||||| |||||| ||||
Sbjct: 37 ccgaccgattttgagacggaattatgtctgtcggtattaattaccgac-gaaatatttcc 95
Query: 71 gtcggtaa 78
||||||||
Sbjct: 96 gtcggtaa 103
>53294_ptc-miRf11472-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| || ||||| | | |||||||| |||||| ||||
Sbjct: 39 ccgaccgattttgagacggaattatgtctgtcggtattaattaccgac-gaaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>53272_ptc-miRf11450-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 37 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 95
Query: 71 gtcggtaa 78
||||||||
Sbjct: 96 gtcggtaa 103
>53271_ptc-miRf11449-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>53193_ptc-miRf11371-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 23 gagacggaattatttccgtcggcaatgtttaccgac 58
||||||||||||| |||||||| |||| ||||||||
Sbjct: 38 gagacggaattatgtccgtcggtaatgattaccgac 73
>53188_ptc-miRf11366-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>53003_ptc-miRf11181-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||| |||| |||||||| | |||||||| |||||| ||||
Sbjct: 39 ccgacagattttgagacggacttatgtccgtcggtataaattaccgac-gaaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>52528_ptc-miRf10706-akr:pmrd
Length = 116
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| || ||||| | | |||||||| |||||| ||||
Sbjct: 76 ccgaccgattttgagacggaattatgtctgtcggtattaattaccgac-gaaatatttcc 18
Query: 71 gtcggtaa 78
||||||||
Sbjct: 17 gtcggtaa 10
>52495_ptc-miRf10673-akr:pmrd
Length = 113
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| | |||| ||||
Sbjct: 75 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgac-ggaatatttcc 17
Query: 71 gtcggtaa 78
||||||||
Sbjct: 16 gtcggtaa 9
>52492_ptc-miRf10670-akr:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| | ||||||||||||| |||||||| | |||||||| |||| ||||||
Sbjct: 70 ccgacagatttggagacggaattatgtccgtcggtataaattaccgacggaaa-aattcc 12
Query: 71 gtcggtaa 78
||||||||
Sbjct: 11 gtcggtaa 4
Score = 42.1 bits (21), Expect = 7e-05
Identities = 43/49 (87%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 25 gacggaattatttccgtcggcaatgtttaccgacagaaataattccgtc 73
||||||||| |||||||||| ||| | ||||||| || |||||||||||
Sbjct: 9 gacggaatt-tttccgtcggtaatttataccgacggacataattccgtc 56
>52164_ptc-miRf10342-akr:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| |||||||| | | |||||||| ||||| |||||
Sbjct: 73 ccgaccgattttgagacggaattatgtccgtcggtattaattaccgacggaaat-attcc 15
Query: 71 gtcggtaa 78
|||||||
Sbjct: 14 atcggtaa 7
>54251_ptc-miRf12429-akr:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| | |||||||| |||||||||||||
Sbjct: 39 ccgacagatttggagacggacttatttccgtcgg 72
>54120_ptc-miRf12298-akr:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||| ||| ||||||||||||||||| ||||||
Sbjct: 49 ttaccgacggaacaaattccgtcggtaagtccgttggt 12
>54067_ptc-miRf12245-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 77 ccgacagattttgagacggaattatt 52
>54066_ptc-miRf12244-akr:pmrd
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 77 ccgacagattttgagacggaattatt 52
>54040_ptc-miRf12218-akr:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||| ||| ||||||||||||||| ||||||||
Sbjct: 66 ccgaccgattttgagacggaattatgtccgtcgg 99
>54012_ptc-miRf12190-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||||| ||||||||||||| || ||||||
Sbjct: 102 ttaccgacagaaat-attccgtcggtaaatccgttggt 138
>53878_ptc-miRf12056-akr:pmrd
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||| |||| |||||||||||||| | |||||||
Sbjct: 22 ttaccgacggaaaaaattccgtcggtaaatttgttggt 59
>53822_ptc-miRf12000-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||||| ||||||||||||| || ||||||
Sbjct: 61 ttaccgacagaaat-attccgtcggtaaatccgttggt 97
>53696_ptc-miRf11874-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||| ||| ||||||||||||||| ||||||||
Sbjct: 53 ccgaccgattttgagacggaattatgtccgtcgg 86
>53586_ptc-miRf11764-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||| |||||| |||||||||||| |||||||||
Sbjct: 61 ttaccgaccgaaata-ttccgtcggtaaatctgttggt 97
>53529_ptc-miRf11707-akr:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||||| ||||||||||||| || ||||||
Sbjct: 102 ttaccgacagaaat-attccgtcggtaaatccgttggt 138
>53337_ptc-miRf11515-akr:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||| ||| ||||||||||||||||| ||||||
Sbjct: 49 ttaccgacggaacaaattccgtcggtaagtccgttggt 12
>53273_ptc-miRf11451-akr:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||| ||| ||||||||||||||| ||||||||
Sbjct: 28 ccgaccgattttgagacggaattatgtccgtcgg 61
>53260_ptc-miRf11438-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 26 ccgacagattttgagacggaattatt 51
>53259_ptc-miRf11437-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 35 ccgacagattttgagacggaattatt 60
>53258_ptc-miRf11436-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 26 ccgacagattttgagacggaattatt 51
>53257_ptc-miRf11435-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatt 36
||||||||| ||||||||||||||||
Sbjct: 35 ccgacagattttgagacggaattatt 60
>53047_ptc-miRf11225-akr:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| | ||||| ||||||||||||||||
Sbjct: 26 ccgacagatttggagacagaattatttccgtcgg 59
>53046_ptc-miRf11224-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| | ||||| ||||||||||||||||
Sbjct: 35 ccgacagatttggagacagaattatttccgtcgg 68
>52193_ptc-miRf10371-akr:pmrd
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcgg 44
||||||||| | |||||||| |||||||||||||
Sbjct: 71 ccgacagatttggagacggacttatttccgtcgg 38
>52139_ptc-miRf10317-akr:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 51 ttaccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||||| ||||||||||||| || ||||||
Sbjct: 61 ttaccgacagaaat-attccgtcggtaaatccgttggt 97
>54079_ptc-miRf12257-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 64 taattccgtcggtaagtctgt 84
|||||||||||||||||||||
Sbjct: 79 taattccgtcggtaagtctgt 99
>53779_ptc-miRf11957-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaaatattccgtcggtaaatccgttggt 137
>53778_ptc-miRf11956-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 61 taccgacagaaaatattccgtcggtaaatccgttggt 97
>53512_ptc-miRf11690-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaaatattccgtcggtaaatccgttggt 137
>53329_ptc-miRf11507-akr:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 61 taccgacagaaaatattccgtcggtaaatccgttggt 97
>53328_ptc-miRf11506-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaaatattccgtcggtaaatccgttggt 137
>53230_ptc-miRf11408-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaaatattccgtcggtaaatccgttggt 137
>53161_ptc-miRf11339-akr:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 58 taccgacagaaaatattccgtcggtaaatccgttggt 94
>53160_ptc-miRf11338-akr:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 taccgacagaaataattccgtcggtaagtctgttggt 88
|||||||||||| ||||||||||||| || ||||||
Sbjct: 101 taccgacagaaaatattccgtcggtaaatccgttggt 137
>54093_ptc-miRf12271-akr:pmrd
Length = 181
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 65 aattccgtcggtaagtctgttggt 88
|||||||||||||| |||||||||
Sbjct: 165 aattccgtcggtaattctgttggt 142
>53863_ptc-miRf12041-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtc 42
||||| ||| ||||||||||||||| ||||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtc 70
>53664_ptc-miRf11842-akr:pmrd
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 65 aattccgtcggtaagtctgttggt 88
||||||||||||||||| ||||||
Sbjct: 35 aattccgtcggtaagtccgttggt 12
>53563_ptc-miRf11741-akr:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 23 gagacggaattatttccgtcggcaatgtttaccgac 58
||||||||||||| |||||||| ||| ||||||||
Sbjct: 39 gagacggaattatgtccgtcggtaataattaccgac 74
>53408_ptc-miRf11586-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtc 42
||||| ||| ||||||||||||||| ||||||
Sbjct: 39 ccgaccgattttgagacggaattatgtccgtc 70
>53130_ptc-miRf11308-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||| ||| ||||||||||||||| || ||||| | | |||||||| | |||| ||||
Sbjct: 37 ccgaccgattttgagacggaattatgtctgtcggtattaattaccgac-ggaatatttcc 95
Query: 71 gtcggtaa 78
||||||||
Sbjct: 96 gtcggtaa 103
>53026_ptc-miRf11204-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 35 tttccgtcggcaatgtttaccgacagaaataattcc 70
|||||||||| ||| | ||||||| |||||||||||
Sbjct: 87 tttccgtcggtaatttataccgacggaaataattcc 52
>52802_ptc-miRf10980-akr:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||| |||| |||||||| | ||||||| || |||| ||||
Sbjct: 37 ccgacagattttgagacggacttatgtccgtcggtataaattaccga-aggaatatttcc 95
Query: 71 gtcggtaa 78
||||||||
Sbjct: 96 gtcggtaa 103
>52801_ptc-miRf10979-akr:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||| |||| |||||||| | ||||||| || |||| ||||
Sbjct: 39 ccgacagattttgagacggacttatgtccgtcggtataaattaccga-aggaatatttcc 97
Query: 71 gtcggtaa 78
||||||||
Sbjct: 98 gtcggtaa 105
>52553_ptc-miRf10731-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||| |||||||| |||||||| | |||||||| ||| || ||||
Sbjct: 71 ccgacagattttgagatggaattatgtccgtcggtataaattaccgacggaa-tatttcc 13
Query: 71 gtcggtaa 78
||||||||
Sbjct: 12 gtcggtaa 5
>52307_ptc-miRf10485-akr:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 3e-04
Identities = 57/68 (83%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 ccgacagatgttgagacggaattatttccgtcggcaatgtttaccgacagaaataattcc 70
||||||||| |||||||||| |||| |||||||| | ||||||| || |||| ||||
Sbjct: 71 ccgacagattttgagacggacttatgtccgtcggtataaattaccga-aggaatatttcc 13
Query: 71 gtcggtaa 78
||||||||
Sbjct: 12 gtcggtaa 5
