miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53618_ptc-miRf11796-akr:pmrd
Length = 78
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 19
Query: 61 aggtttaataacagtacc 78
||||||||||||||||||
Sbjct: 18 aggtttaataacagtacc 1
>52253_ptc-miRf10431-akr:pmrd
Length = 92
Score = 155 bits (78), Expect = 5e-39
Identities = 78/78 (100%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 26
Query: 61 aggtttaataacagtacc 78
||||||||||||||||||
Sbjct: 25 aggtttaataacagtacc 8
>53956_ptc-miRf12134-akr:pmrd
Length = 91
Score = 105 bits (53), Expect = 4e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>53498_ptc-miRf11676-akr:pmrd
Length = 97
Score = 105 bits (53), Expect = 4e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 56
>52796_ptc-miRf10974-akr:pmrd
Length = 96
Score = 105 bits (53), Expect = 4e-24
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 57
>53112_ptc-miRf11290-akr:pmrd
Length = 71
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 63
||||||||||||||||||||||| ||| ||||| |||||||||| |||||||||||| ||
Sbjct: 1 cttttattaaacccggaccggtctagctaccggatcgaccgggttccgggccgggccggg 60
Query: 64 tttaataacag 74
|||||||||||
Sbjct: 61 tttaataacag 71
>53249_ptc-miRf11427-akr:pmrd
Length = 77
Score = 99.6 bits (50), Expect = 3e-22
Identities = 67/72 (93%), Gaps = 3/72 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggcc 57
Query: 61 aggtttaataac 72
|||||||||||
Sbjct: 58 gggtttaataac 69
>54259_ptc-miRf12437-akr:pmrd
Length = 84
Score = 97.6 bits (49), Expect = 1e-21
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggcc 60
Query: 61 aggtttaataacagt 75
|||||||||||||
Sbjct: 61 gagtttaataacagt 75
>53790_ptc-miRf11968-akr:pmrd
Length = 91
Score = 97.6 bits (49), Expect = 1e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>53671_ptc-miRf11849-akr:pmrd
Length = 94
Score = 97.6 bits (49), Expect = 1e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcttttgttaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>53352_ptc-miRf11530-akr:pmrd
Length = 75
Score = 97.6 bits (49), Expect = 1e-21
Identities = 69/75 (92%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccaggccgggcc 57
Query: 61 aggtttaataacagt 75
||||||||||||||
Sbjct: 58 gggtttaataacagt 72
>52916_ptc-miRf11094-akr:pmrd
Length = 99
Score = 97.6 bits (49), Expect = 1e-21
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgatcgggtcccggg 56
>53340_ptc-miRf11518-akr:pmrd
Length = 94
Score = 95.6 bits (48), Expect = 4e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 gtcttttattaaacccggaccggtccagccactgggtcgaccgggtcccggg 56
>54062_ptc-miRf12240-akr:pmrd
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 47
>53888_ptc-miRf12066-akr:pmrd
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 47
>53720_ptc-miRf11898-akr:pmrd
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 47
>53648_ptc-miRf11826-akr:pmrd
Length = 79
Score = 93.7 bits (47), Expect = 2e-20
Identities = 67/73 (91%), Gaps = 3/73 (4%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 75 ggtcttttattaaacccggaccggtccagccaccgggtcgacc---tgctgggccgggcc 19
Query: 61 aggtttaataaca 73
||||||||||||
Sbjct: 18 gggtttaataaca 6
>53000_ptc-miRf11178-akr:pmrd
Length = 78
Score = 93.7 bits (47), Expect = 2e-20
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 47
>54046_ptc-miRf12224-akr:pmrd
Length = 97
Score = 91.7 bits (46), Expect = 7e-20
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtccc 50
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4 ggtcttttattaaacccggaccggtccagccaccgggtcgaccggatccc 53
>53858_ptc-miRf12036-akr:pmrd
Length = 77
Score = 89.7 bits (45), Expect = 3e-19
Identities = 68/75 (90%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcc 60
||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||
Sbjct: 2 ggtcttttattaaacccggaccggtccagccaccgggtcgacccg---ccggaccgggcc 58
Query: 61 aggtttaataacagt 75
|||||||||||||
Sbjct: 59 gagtttaataacagt 73
>52973_ptc-miRf11151-akr:pmrd
Length = 68
Score = 89.7 bits (45), Expect = 3e-19
Identities = 65/71 (91%), Gaps = 3/71 (4%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 63
||||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||
Sbjct: 68 cttttattaaacccggaccggtccaaccaccgggtcgacc---tgccgggccgggccggg 12
Query: 64 tttaataacag 74
|||||||||||
Sbjct: 11 tttaataacag 1
>52986_ptc-miRf11164-akr:pmrd
Length = 78
Score = 87.7 bits (44), Expect = 1e-18
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgggtcccggg 47
>52827_ptc-miRf11005-akr:pmrd
Length = 74
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/74 (91%), Gaps = 4/74 (5%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggcca 61
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||
Sbjct: 2 gtcttttattaaacccggaccggtccagccaccgggtc--ctggg--ccgggccgggccg 57
Query: 62 ggtttaataacagt 75
||||||||||||||
Sbjct: 58 ggtttaataacagt 71
>52383_ptc-miRf10561-akr:pmrd
Length = 84
Score = 87.7 bits (44), Expect = 1e-18
Identities = 47/48 (97%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccg 51
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 84 cttttattaaacccggaccggtccagccaccgggttgaccgggtcccg 37
>53350_ptc-miRf11528-akr:pmrd
Length = 78
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgactgggtcccggg 47
>53068_ptc-miRf11246-akr:pmrd
Length = 86
Score = 85.7 bits (43), Expect = 4e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 taaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
>52967_ptc-miRf11145-akr:pmrd
Length = 62
Score = 85.7 bits (43), Expect = 4e-18
Identities = 60/65 (92%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccaggttt 66
||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggccgggttt 57
Query: 67 aataa 71
|||||
Sbjct: 58 aataa 62
>52951_ptc-miRf11129-akr:pmrd
Length = 62
Score = 85.7 bits (43), Expect = 4e-18
Identities = 60/65 (92%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccaggttt 66
||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggccgggttt 57
Query: 67 aataa 71
|||||
Sbjct: 58 aataa 62
>53332_ptc-miRf11510-akr:pmrd
Length = 84
Score = 83.8 bits (42), Expect = 2e-17
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcc 49
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cttttattaaacccggaccggtccagccaccggatcgaccgggtcc 46
>52971_ptc-miRf11149-akr:pmrd
Length = 68
Score = 83.8 bits (42), Expect = 2e-17
Identities = 62/68 (91%), Gaps = 3/68 (4%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 63
||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct: 68 cttttattaaacccggaccggtccagccaccgggtcgac---ttgccgggccgggccggg 12
Query: 64 tttaataa 71
||||||||
Sbjct: 11 tttaataa 4
>52823_ptc-miRf11001-akr:pmrd
Length = 129
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccggg 58
||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 68 ggtcttttaataaacccagaccggtccagccaccgggtcgatcgggtcccgggtcggg 125
>54318_ptc-miRf12496-akr:pmrd
Length = 92
Score = 81.8 bits (41), Expect = 6e-17
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 1 ggtcttttagtaaacccggaccggtccagccaccggatcgaccaggtcccggg 53
>53305_ptc-miRf11483-akr:pmrd
Length = 68
Score = 81.8 bits (41), Expect = 6e-17
Identities = 64/71 (90%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccagg 63
||||||||||||||||||||||| ||||||||| |||||| | |||||||||||| ||
Sbjct: 1 cttttattaaacccggaccggtctagccaccggatcgacccg---ccgggccgggccggg 57
Query: 64 tttaataacag 74
|||||||||||
Sbjct: 58 tttaataacag 68
>54232_ptc-miRf12410-akr:pmrd
Length = 78
Score = 79.8 bits (40), Expect = 3e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgaccgagtcccggg 47
>53728_ptc-miRf11906-akr:pmrd
Length = 62
Score = 79.8 bits (40), Expect = 3e-16
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Plus
Query: 10 ttaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccaggtttaat 69
|||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||
Sbjct: 4 ttaaacccggaccggtccagccaccgggtcgacccg---ccgggccgggccgggtttaat 60
Query: 70 aa 71
||
Sbjct: 61 aa 62
>53383_ptc-miRf11561-akr:pmrd
Length = 94
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 6 tttattaaacccggaccggtccagccaccgggtcgaccgg 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttattaaacccggaccggtccagccaccgggtcgaccgg 48
>53672_ptc-miRf11850-akr:pmrd
Length = 78
Score = 77.8 bits (39), Expect = 1e-15
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccactgggtcgatcgggtcccggg 47
>52772_ptc-miRf10950-akr:pmrd
Length = 62
Score = 77.8 bits (39), Expect = 1e-15
Identities = 59/65 (90%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggtcccgggccgggccaggttt 66
||||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgggtcaacc---tgccgggccgggccgggttt 57
Query: 67 aataa 71
|||||
Sbjct: 58 aataa 62
>53576_ptc-miRf11754-akr:pmrd
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
|||||||||||||||||||||| ||||||| |||||||||| |||||||||||
Sbjct: 2 ggtcttttattaaacccggacc-gtccagcgaccgggtcgatcgggtcccggg 53
>52979_ptc-miRf11157-akr:pmrd
Length = 72
Score = 71.9 bits (36), Expect = 6e-14
Identities = 66/75 (88%), Gaps = 7/75 (9%)
Strand = Plus / Minus
Query: 4 cttttattaaacccggaccggtccagccac----cgggtcgaccgggtcccgggccgggc 59
|||||||||||||||||||||||||||||| |||||||||| | |||||||||||
Sbjct: 72 cttttattaaacccggaccggtccagccaccggtcgggtcgacccg---ccgggccgggc 16
Query: 60 caggtttaataacag 74
| |||||||||||||
Sbjct: 15 cgggtttaataacag 1
>54015_ptc-miRf12193-akr:pmrd
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||||
Sbjct: 5 ttttattaaacccggaccggtccagccaccgggtc 39
>51830_ptc-miRf10008-akr:pmrd
Length = 84
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 81 ggtcttttattaaacccggaccggtccagccaccaggtc 43
>53952_ptc-miRf12130-akr:pmrd
Length = 77
Score = 65.9 bits (33), Expect = 4e-12
Identities = 65/75 (86%), Gaps = 8/75 (10%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtcgaccgggtc------ccgggccgg 57
||||||||||||||| |||||||||||||||||||| ||||||| |||||||||
Sbjct: 1 cttttattaaacccgaaccggtccagccaccgggtc--ccgggtcgacccgccgggccgg 58
Query: 58 gccaggtttaataac 72
||| |||||||||||
Sbjct: 59 gccgggtttaataac 73
>52284_ptc-miRf10462-akr:pmrd
Length = 105
Score = 65.9 bits (33), Expect = 4e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 3 tcttttattaaacccggaccggtccagccaccgggtcgacc 43
||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 63 tcttttattaaacccagaccggtccagccaccgggttgacc 103
>52005_ptc-miRf10183-akr:pmrd
Length = 78
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgacc 43
|||||||||||||||||||||||| ||||||||||||
Sbjct: 78 ttattaaacccggaccggtccagctaccgggtcgacc 42
>53964_ptc-miRf12142-akr:pmrd
Length = 75
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 4 cttttattaaacccggaccggtccagccaccgggtc 39
||||||||||||||||||||||| ||||||||||||
Sbjct: 1 cttttattaaacccggaccggtctagccaccgggtc 36
>53405_ptc-miRf11583-akr:pmrd
Length = 77
Score = 61.9 bits (31), Expect = 6e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 5 ttttattaaacccggaccggtccagccaccgggtc 39
||||| |||||||||||||||||||||||||||||
Sbjct: 5 ttttagtaaacccggaccggtccagccaccgggtc 39
>51920_ptc-miRf10098-akr:pmrd
Length = 84
Score = 61.9 bits (31), Expect = 6e-11
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 5 ttttattaaacccggaccggtccagccaccgggtcgaccgggtcccg 51
||||| ||||||||||||||||| || || |||||||||||||||||
Sbjct: 81 ttttagtaaacccggaccggtccggctactgggtcgaccgggtcccg 35
>53848_ptc-miRf12026-akr:pmrd
Length = 90
Score = 60.0 bits (30), Expect = 2e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 2 gtcttttattaaacccggaccggtccagccaccgggtcgaccgggt 47
|||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 1 gtcttttaacaaactcggaccggtccagccatcgggtcgaccgggt 46
>53829_ptc-miRf12007-akr:pmrd
Length = 66
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgg 36
||||||||||||||||||||||||||||||
Sbjct: 1 ttattaaacccggaccggtccagccaccgg 30
>53131_ptc-miRf11309-akr:pmrd
Length = 56
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 ttattaaacccggaccggtccagccaccgggtc 39
|||||||||||||||||||||||||||| ||||
Sbjct: 1 ttattaaacccggaccggtccagccacccggtc 33
>52059_ptc-miRf10237-akr:pmrd
Length = 97
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 12 aaacccggaccggtccagccaccgggtcgacc 43
|||||||||| |||||||||||||||||||||
Sbjct: 42 aaacccggactggtccagccaccgggtcgacc 11
>52317_ptc-miRf10495-akr:pmrd
Length = 125
Score = 54.0 bits (27), Expect = 1e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 13 aacccggaccggtccagccaccgggtcgaccgggtcccg 51
|||| ||| ||||||||||||||||| ||||||||||||
Sbjct: 78 aaccaggaacggtccagccaccgggttgaccgggtcccg 116
>54004_ptc-miRf12182-akr:pmrd
Length = 127
Score = 52.0 bits (26), Expect = 6e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 12 aaacccggaccggtccagccaccgggtcgaccgggtcccggg 53
||||||| |||||||||||| |||||||| ||||||| ||||
Sbjct: 72 aaacccgaaccggtccagcccccgggtcggccgggtctcggg 113
>52391_ptc-miRf10569-akr:pmrd
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 14 acccggaccggtccagccaccg 35
||||||||||||||||||||||
Sbjct: 38 acccggaccggtccagccaccg 17
>52233_ptc-miRf10411-akr:pmrd
Length = 114
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 16 ccggaccggtccagccaccgggtcga 41
||||||||||||||||||| ||||||
Sbjct: 46 ccggaccggtccagccaccaggtcga 21
>51921_ptc-miRf10099-akr:pmrd
Length = 67
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 49 ccgggccgggccaggtttaataacag 74
|||||||||||| |||||||||||||
Sbjct: 26 ccgggccgggccgggtttaataacag 1
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 33 ccgggtcgaccgggtcccggg 53
|||||||||||||||||||||
Sbjct: 55 ccgggtcgaccgggtcccggg 35
>54338_ptc-miRf12516-akr:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1 ggtcttttattaaacccggaccggtccagccac 33
||||||||| ||||||| ||||||||||||||
Sbjct: 93 ggtcttttaacaaacccgaaccggtccagccac 61
>54211_ptc-miRf12389-akr:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ggaccggtccagccaccgggt 38
|||||||||||||||||||||
Sbjct: 68 ggaccggtccagccaccgggt 88
>53054_ptc-miRf11232-akr:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 33 ccgggtcgaccgggtcccggg 53
|||||||||||||||||||||
Sbjct: 90 ccgggtcgaccgggtcccggg 110
>52818_ptc-miRf10996-akr:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggt 47
|||||||||||| |||| ||||||||| | ||||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggt 38
>52817_ptc-miRf10995-akr:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 7 ttattaaacccggaccggtccagccaccgggtcgaccgggt 47
|||||||||||| |||| ||||||||| | ||||||||||
Sbjct: 78 ttattaaacccgaaccgatccagccactgaatcgaccgggt 38
>51849_ptc-miRf10027-akr:pmrd
Length = 115
Score = 42.1 bits (21), Expect = 6e-05
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 tcttttattaaacccggaccggtccagccaccg 35
||||||| ||||| || ||||||||||||||||
Sbjct: 63 tcttttaataaactcgaaccggtccagccaccg 31
>52543_ptc-miRf10721-akr:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 20 accggtccagccaccgggtcgacc 43
||||||||| ||||||||||||||
Sbjct: 38 accggtccaaccaccgggtcgacc 15
