miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>53444_ptc-miRf11622-akr:pmrd
Length = 75
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 60
Query: 67 ggcttgcttgtctc 80
||||||||||||||
Sbjct: 61 ggcttgcttgtctc 74
>53120_ptc-miRf11298-akr:pmrd
Length = 75
Score = 147 bits (74), Expect = 1e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 7 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 60
Query: 67 ggcttgcttgtctc 80
||||||||||||||
Sbjct: 61 ggcttgcttgtctc 74
>54308_ptc-miRf12486-akr:pmrd
Length = 69
Score = 137 bits (69), Expect = 1e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 7 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggggagtcctccaccatgtgctaagtgggagattaggtaatcccacttgcacatggtgg 60
Query: 67 ggcttgctt 75
|||||||||
Sbjct: 61 ggcttgctt 69
>53013_ptc-miRf11191-akr:pmrd
Length = 77
Score = 38.2 bits (19), Expect = 9e-04
Identities = 29/31 (93%), Gaps = 1/31 (3%)
Strand = Plus / Plus
Query: 24 tgtgctaagtgggagattaggtaatcccact 54
|||||||||||| |||||||||| |||||||
Sbjct: 1 tgtgctaagtgg-agattaggtattcccact 30
