miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51660_ptc-miR169c:pmrd
          Length = 102

 Score =  135 bits (68), Expect = 5e-33
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                      
Query: 1  cagccaaggatgatttgccgacgactcagtttttgcttccatatggtaggagagatgaag 60
          ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| 
Sbjct: 11 cagccaaggatgacttgccgacgactcaatttttgcttccatatggtagaagagatgaat 70

                                  
Query: 61 aggttggcaggttttccttggcta 84
          ||||||||||||||||||||||||
Sbjct: 71 aggttggcaggttttccttggcta 94




>52003_ptc-miRf10181-akr:pmrd
          Length = 113

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                
Query: 1  cagccaaggatgatttgccgacgactcagtttttgctt 38
          ||||||||||||| ||||||||||||| ||||||||||
Sbjct: 10 cagccaaggatgacttgccgacgactc-gtttttgctt 46




>51659_ptc-miR169b:pmrd
          Length = 113

 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 36/38 (94%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                
Query: 1  cagccaaggatgatttgccgacgactcagtttttgctt 38
          ||||||||||||| ||||||||||||| ||||||||||
Sbjct: 11 cagccaaggatgacttgccgacgactc-gtttttgctt 47




>54367_ptr-miR169a:pmrd
          Length = 101

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 1  cagccaaggatgatttgccgacgactc 27
          ||||||||||||| |||||||||||||
Sbjct: 1  cagccaaggatgacttgccgacgactc 27




>46859_ama-miR169:pmrd
          Length = 100

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 2  agccaaggatgatttgccgacga 24
          |||||||||||| ||||||||||
Sbjct: 15 agccaaggatgacttgccgacga 37