miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54372_pts-miR157:pmrd
Length = 356
Score = 706 bits (356), Expect = 0.0
Identities = 356/356 (100%)
Strand = Plus / Plus
Query: 1 gtgcatctaagctaaatgtcaaactagatactgaccttcacttaatttgttaagatgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcatctaagctaaatgtcaaactagatactgaccttcacttaatttgttaagatgaat 60
Query: 61 acatcgcttcagcagtaagtcatctggatggaattgaagtcattcccctttgatgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatcgcttcagcagtaagtcatctggatggaattgaagtcattcccctttgatgttctt 120
Query: 121 aacagctgaaactcttgaaagtaactgctaccatcagtgtgacgtcaaggtatgcacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacagctgaaactcttgaaagtaactgctaccatcagtgtgacgtcaaggtatgcacttg 180
Query: 181 agagtcagttgacggttgctcagtccgccaatactctgatgaagcaagtggtgagttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagtcagttgacggttgctcagtccgccaatactctgatgaagcaagtggtgagttttg 240
Query: 241 gggtataacttgcagcacagactgagtggtgtgatttgtatgcatgggttgttcaaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtataacttgcagcacagactgagtggtgtgatttgtatgcatgggttgttcaaatga 300
Query: 301 aatagattgcggttcacgtgaaccccatgaattgtttgacagaagagagagagcac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aatagattgcggttcacgtgaaccccatgaattgtttgacagaagagagagagcac 356
>54365_ptr-miR156:pmrd
Length = 373
Score = 618 bits (312), Expect = e-178
Identities = 321/324 (99%)
Strand = Plus / Plus
Query: 33 gaccttcacttaatttgttaagatgaatacatcgcttcagcagtaagtcatctggatgga 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gaccttcacttaatttgttaagatgaatacatcgcttcagcagtaagtcatctggatgga 109
Query: 93 attgaagtcattcccctttgatgttcttaacagctgaaactcttgaaagtaactgctacc 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 attgaagtcattcccctttgatgttcttaacagctgaaactcttgaaagtaactgctacc 169
Query: 153 atcagtgtgacgtcaaggtatgcacttgagagtcagttgacggttgctcagtccgccaat 212
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atcagtgtgacgtcgaggtatgcacttgagagtcagttgacggttgctcagtccgccaat 229
Query: 213 actctgatgaagcaagtggtgagttttggggtataacttgcagcacagactgagtggtgt 272
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 actctgatgaagccagtggtgagttttggggtataacttgcagcacagactgagtggtgt 289
Query: 273 gatttgtatgcatgggttgttcaaatgaaatagattgcggttcacgtgaaccccatgaat 332
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 290 gatttgtatgcatgggttgttcaaatgaaatagattgcggttcacgcgaaccccatgaat 349
Query: 333 tgtttgacagaagagagagagcac 356
||||||||||||||||||||||||
Sbjct: 350 tgtttgacagaagagagagagcac 373
>54662_stu-miR157b:pmrd
Length = 617
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 319 tgaaccccatgaattgtttgacagaagagagagagcac 356
||||||||| ||||| |||||||||||||||||||||
Sbjct: 514 tgaaccccaggaattagttgacagaagagagagagcac 551
>48786_nbe-miR157a:pmrd
Length = 169
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 335 tttgacagaagagagagagcac 356
||||||||||||||||||||||
Sbjct: 148 tttgacagaagagagagagcac 169
>48785_nbe-miR156b:pmrd
Length = 169
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 335 tttgacagaagagagagagcac 356
||||||||||||||||||||||
Sbjct: 148 tttgacagaagagagagagcac 169
>48633_gra-miR157d:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 335 tttgacagaagagagagagcac 356
||||||||||||||||||||||
Sbjct: 68 tttgacagaagagagagagcac 89
>54928_zma-miR157m:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54926_zma-miR156q:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54925_zma-miR156p:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 169 ttgacagaagagagagagcac 189
>54909_zel-miR157:pmrd
Length = 69
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54663_stu-miR157c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>54627_sof-miR156u:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 62 ttgacagaagagagagagcac 82
>54531_sin-miR157:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>51321_par-miR157:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>51319_pam-miR157:pmrd
Length = 216
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48787_nbe-miR157b:pmrd
Length = 207
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48688_mdo-miR156a:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 89 ttgacagaagagagagagcac 109
>48684_lsa-miR157:pmrd
Length = 357
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48676_lja-miR157b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48653_hvv-miR156b:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 66 ttgacagaagagagagagcac 86
>48643_han-miR157b:pmrd
Length = 364
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48632_gra-miR157c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48538_gma-miR157r:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 127 ttgacagaagagagagagcac 147
>48529_gma-miR156b:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 20 ttgacagaagagagagagcac 40
>48418_can-miR157:pmrd
Length = 155
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 1 ttgacagaagagagagagcac 21
>48305_bdi-miR156:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 100 ttgacagaagagagagagcac 120
>46928_ath-miR157m:pmrd
Length = 50
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 30 ttgacagaagagagagagcac 50
>46903_aqc-miR529:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 17 ttgacagaagagagagagcac 37
>46857_ahy-miR157k:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 336 ttgacagaagagagagagcac 356
|||||||||||||||||||||
Sbjct: 21 ttgacagaagagagagagcac 41
