miRNEST 2.0, an integrative microRNA resource :: BLAST
>46958_ath-miR168b:pmrd
Length = 124
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 1 ttaccggcggtctctaattcgcttggtgcaggtcgggaactgattggct 49
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ttaccggcggtctcggattcgcttggtgcaggtcgggaactgattggct 49
>51651_ptc-miR168b:pmrd
Length = 136
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 9 ggtctctaattcgcttggtgcaggtcgggaactgatt 45
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaactgatt 37
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 104 gaaagtgaattggatcccgccttgcatcaactgaatcg 141
||||| ||||||||||||||||||||||||||||||||
Sbjct: 95 gaaagagaattggatcccgccttgcatcaactgaatcg 132
>48560_gma-miR168:pmrd
Length = 125
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 110 gaattggatcccgccttgcatcaactgaatcgaagaccggggtgaa 155
|||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct: 79 gaattggatcccgccttgcatcaactgaatcggaggccgcggtgaa 124
>51650_ptc-miR168a:pmrd
Length = 160
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 9 ggtctctaattcgcttggtgcaggtcgggaactgatt 45
||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggtctctgattcgcttggtgcaggtcgggaactgatt 37
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 110 gaattggatcccgccttgcatcaactgaatcg 141
||||||||||||||||||||||||||||||||
Sbjct: 125 gaattggatcccgccttgcatcaactgaatcg 156
>48349_bna-miR168:pmrd
Length = 133
Score = 65.9 bits (33), Expect = 8e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 5 cggcggtctctaattcgcttggtgcaggtcgggaactgattggct 49
|||||| |||| | |||||||||||||||||||||||||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgattggct 48
>54802_vvi-miR168:pmrd
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 9 ggtctctaattcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||||||||||||
Sbjct: 1 ggtctctaattcgcttggtgcaggtcgggaac 32
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 116 gatcccgccttgcatcaactgaatcgaagac 146
|||||||||||||||||||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagac 129
>54374_pts-miR168a:pmrd
Length = 118
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 104 gaaagtgaattggatcccgccttgcatcaactga 137
||||| ||||||||||||||||||||||||||||
Sbjct: 85 gaaagagaattggatcccgccttgcatcaactga 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcgggaactgatt 45
|||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgatt 27
>54366_ptr-miR168:pmrd
Length = 118
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 104 gaaagtgaattggatcccgccttgcatcaactga 137
||||| ||||||||||||||||||||||||||||
Sbjct: 85 gaaagagaattggatcccgccttgcatcaactga 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcgggaactgatt 45
|||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgatt 27
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 112 attggatcccgccttgcatcaactgaatcg 141
||||||||||||||||||||||||||||||
Sbjct: 91 attggatcccgccttgcatcaactgaatcg 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 attcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||||
Sbjct: 11 attcgcttggtgcaggtcgggaac 34
>46957_ath-miR168a:pmrd
Length = 138
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 112 attggatcccgccttgcatcaactgaatcg 141
||||||||||||||||||||||||||||||
Sbjct: 96 attggatcccgccttgcatcaactgaatcg 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 attcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||||
Sbjct: 16 attcgcttggtgcaggtcgggaac 39
>54375_pts-miR168b:pmrd
Length = 140
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 110 gaattggatcccgccttgcatcaactga 137
||||||||||||||||||||||||||||
Sbjct: 113 gaattggatcccgccttgcatcaactga 140
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcgggaactgatt 45
|||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactgatt 27
>46959_ath-miR168m:pmrd
Length = 104
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 112 attggatcccgccttgcatcaactga 137
||||||||||||||||||||||||||
Sbjct: 79 attggatcccgccttgcatcaactga 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcgggaac 40
||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaac 22
>48649_hte-miR168:pmrd
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcgggaactg 42
||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggaactg 24
>55000_zma-miR168b:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 115 ggatcccgccttgcatcaactgaatcg 141
||||||||||||||||||| |||||||
Sbjct: 63 ggatcccgccttgcatcaagtgaatcg 89
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 113 ttggatcccgccttgcatcaactga 137
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcggga 38
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54546_sly-miR168:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tcgcttggtgcaggtcggga 38
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
