miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54773_vvi-miR156h:pmrd
Length = 228
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 97 atgacagaagagagagagcatgct 120
||||||||||||||||||||||||
Sbjct: 10 atgacagaagagagagagcatgct 33
>46919_ath-miR156o:pmrd
Length = 245
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 aggatgacagaagagagagagca 116
|||||||||||||||||||||||
Sbjct: 222 aggatgacagaagagagagagca 244
>48470_cru-miR156:pmrd
Length = 67
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 ggatgacagaagagagagagca 116
||||||||||||||||||||||
Sbjct: 45 ggatgacagaagagagagagca 66
>54920_zma-miR156j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagca 39
>54657_stu-miR156b:pmrd
Length = 382
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 361 gatgacagaagagagagagca 381
>54626_sof-miR156h:pmrd
Length = 343
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 322 gatgacagaagagagagagca 342
>54396_sbi-miR156d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 19 gatgacagaagagagagagca 39
>51340_ppd-miR156:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 125 gatgacagaagagagagagca 145
>48811_osa-miR156k:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 9 gatgacagaagagagagagca 29
>48535_gma-miR156h:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 126 gatgacagaagagagagagca 146
>48534_gma-miR156g:pmrd
Length = 209
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 188 gatgacagaagagagagagca 208
>48472_csi-miR156b:pmrd
Length = 515
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 494 gatgacagaagagagagagca 514
>48426_cpt-miR156b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 96 gatgacagaagagagagagca 116
|||||||||||||||||||||
Sbjct: 9 gatgacagaagagagagagca 29
>51321_par-miR157:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tgacagaagagagagagcatgcta 121
||||||||||||||||||| ||||
Sbjct: 2 tgacagaagagagagagcacgcta 25
>51320_par-miR156:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tgacagaagagagagagcatgcta 121
||||||||||||||||||| ||||
Sbjct: 1 tgacagaagagagagagcacgcta 24
>48670_ini-miR157b:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tgacagaagagagagagcatgcta 121
|||||||||| |||||||||||||
Sbjct: 2 tgacagaagatagagagcatgcta 25
>48669_ini-miR157a:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tgacagaagagagagagcatgcta 121
|||||||||| |||||||||||||
Sbjct: 2 tgacagaagatagagagcatgcta 25
>48668_iba-miR157:pmrd
Length = 283
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 98 tgacagaagagagagagcatgcta 121
|||||||||| |||||||||||||
Sbjct: 2 tgacagaagatagagagcatgcta 25
>48492_ghr-miR157:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 97 atgacagaagagagagagca 116
||||||||||||||||||||
Sbjct: 1 atgacagaagagagagagca 20
