miRNEST 2.0, an integrative microRNA resource :: BLAST
>55109_zma-miR437c:pmrd
Length = 177
Score = 73.8 bits (37), Expect = 4e-14
Identities = 101/121 (83%), Gaps = 1/121 (0%)
Strand = Plus / Plus
Query: 53 tagaatatcagatgagtttcattagattctttatgcaatatattttgatagagaatttat 112
||||| |||| || |||||||||| || | |||| ||| | ||||||| ||| ||||||
Sbjct: 57 tagaacatcaaattagtttcattattttttctatgaaatctgttttgatggagcatttat 116
Query: 113 ttgaacttgtaaatgtcagtatatttt-ctaaaagcacggtcaaagttagagaagtttga 171
||||||||||| ||| | |||||||| | |||||| ||||||||||||||||||||||
Sbjct: 117 ttgaacttgtagatgctaatatatttttcaaaaagcttggtcaaagttagagaagtttga 176
Query: 172 c 172
|
Sbjct: 177 c 177
>54518_sbi-miR437v:pmrd
Length = 114
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||||||| |||||||||||||
Sbjct: 114 aagtcaaacttctctaactttgtccaagtttatagaaaaa 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 caaagttagagaagtttgactt 174
||||||||||||||||||||||
Sbjct: 93 caaagttagagaagtttgactt 114
>54506_sbi-miR437j:pmrd
Length = 172
Score = 63.9 bits (32), Expect = 4e-11
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 68 gtttcattagattctttatgcaatatattttgatagagaatttatttgaacttgtaaatg 127
||||||||||||||| | | ||||| | ||||||| ||||||||| ||||||| |||
Sbjct: 65 gtttcattagattctccaagaaatatgtcttgatagcacatttatttgtacttgtagatg 124
Query: 128 tcagtatattttct-aaaagcacggtcaaagttagagaagtttgactt 174
| | | |||||| | |||| || |||||||||||||||||||||||||
Sbjct: 125 ttaatgtattttttgaaaaacatggtcaaagttagagaagtttgactt 172
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 3 gtcaaacttctttaactttgtccaggtttatagaaaa 39
||||||||||| |||||||| ||| ||||||||||||
Sbjct: 1 gtcaaacttctctaactttgaccaagtttatagaaaa 37
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgac 172
|||||||||||||||||||||||
Sbjct: 23 ggtcaaagttagagaagtttgac 1
>54504_sbi-miR437g:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 1e-10
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||||||| |||||||| ||| |||||||||||| | |||||||| || ||
Sbjct: 174 aagtcaaacttctctaactttgaccaagtttatagaaaattgcatcaacatctacaacat 115
Query: 61 cagatgagtttcattagattctttatgcaatatattttgatagagaatttatttgaactt 120
|| | ||||||| | ||||| |||| ||||| | ||||||| | ||||||||||||||
Sbjct: 114 caaactagtttcaccaaattctctatgaaatatgtcttgatagtgcatttatttgaactt 55
Query: 121 gta 123
|||
Sbjct: 54 gta 52
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 150 ggtcaaagttagagaagtttgacttag 176
>54516_sbi-miR437t:pmrd
Length = 170
Score = 58.0 bits (29), Expect = 2e-09
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatct 53
||||||||||||| |||||||| ||| ||||||||||||| | |||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttatagaaaaatgcacaaacatct 118
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 146 ggtcaaagttagagaagtttgactt 170
>54507_sbi-miR437k:pmrd
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgacttag 176
|||||||||| | |||||||||||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaagttagagaagtttgacttag 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| ||||||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttttagaaaaa 131
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgac 172
|||||||||||||||||||||||
Sbjct: 25 ggtcaaagttagagaagtttgac 3
>55112_zma-miR437f:pmrd
Length = 342
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 2 aagtcaaacttctctaactttgaccaagtttatagaaaaa 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgactta 175
||||||||||||||||||||||||||
Sbjct: 26 ggtcaaagttagagaagtttgactta 1
>55111_zma-miR437e:pmrd
Length = 182
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
|||||||||||||||||||| | ||| |||||||||||||
Sbjct: 180 aagtcaaacttctttaacttcgaccaagtttatagaaaaa 141
>55107_zma-miR437a:pmrd
Length = 342
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 341 aagtcaaacttctctaactttgaccaagtttatagaaaaa 302
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactta 175
||||||||||||||||||||||||||
Sbjct: 317 ggtcaaagttagagaagtttgactta 342
>54500_sbi-miR437b:pmrd
Length = 171
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 171 aagtcaaacttctctaactttgaccaagtttatagaaaaa 132
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 147 ggtcaaagttagagaagtttgactt 171
>48988_osa-miR437:pmrd
Length = 213
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 175 aagtcaaacttctctaactttgaccaagtttatagaaaaa 136
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 151 ggtcaaagttagagaagtttgacttag 177
>48987_osa-miR437:pmrd
Length = 213
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 175 aagtcaaacttctctaactttgaccaagtttatagaaaaa 136
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 151 ggtcaaagttagagaagtttgacttag 177
>48986_osa-miR437:pmrd
Length = 213
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 175 aagtcaaacttctctaactttgaccaagtttatagaaaaa 136
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 151 ggtcaaagttagagaagtttgacttag 177
>54526_sbi-miR1435a:pmrd
Length = 287
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 107 atttatttgaacttgtaaatgtcagtatattttctaaaa 145
||||||||||||||||| |||| | ||||||||||||||
Sbjct: 132 atttatttgaacttgtagatgttaatatattttctaaaa 94
>54512_sbi-miR437p:pmrd
Length = 188
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 162 ggtcaaagttagagaagtttgacttag 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||||| ||||||
Sbjct: 186 aagtcaaacttctctaactttgaccaagtttattgaaaaa 147
>54503_sbi-miR437f:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaa 39
||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 172 aagtcaaacttctctaactttgaccaagtttatagaaaa 134
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgacttag 176
|||||||||||||||||||||||||||
Sbjct: 148 ggtcaaagttagagaagtttgacttag 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 152 tcaaagttagagaagtttgact 173
||||||||||||||||||||||
Sbjct: 22 tcaaagttagagaagtttgact 1
>54517_sbi-miR437u:pmrd
Length = 164
Score = 52.0 bits (26), Expect = 1e-07
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||||||| ||||||| ||| ||||||||||||| || | || ||||| | ||
Sbjct: 164 aagtcaaacttctctaactttcaccaagtttatagaaaaatacgccaatatctatgacat 105
Query: 61 cagatgagtttcattagattct 82
|| || |||||||||| |||||
Sbjct: 104 caaattagtttcattaaattct 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactt 174
|||||||||||||||||||||
Sbjct: 144 aaagttagagaagtttgactt 164
>54514_sbi-miR437r:pmrd
Length = 180
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaa 38
||||||||||||| |||||||| ||| |||||||||||
Sbjct: 178 aagtcaaacttctctaactttggccaagtttatagaaa 141
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 153 caaagttagagaagtttgacttag 176
||||||||||||||||||||||||
Sbjct: 157 caaagttagagaagtttgacttag 180
>54511_sbi-miR437o:pmrd
Length = 175
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 151 gtcaaagttagagaagtttgacttag 176
||||||||||||||||||||||||||
Sbjct: 150 gtcaaagttagagaagtttgacttag 175
>54502_sbi-miR437e:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 150 ggtcaaagttagagaagtttgactt 174
|||||||||||||||||||||||||
Sbjct: 77 ggtcaaagttagagaagtttgactt 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| |||||||
Sbjct: 101 aagtcaaacttctctaactttgaccaagttttcagaaaaa 62
>55108_zma-miR437b:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 152 tcaaagttagagaagtttgactta 175
||||||||||||||||||||||||
Sbjct: 145 tcaaagttagagaagtttgactta 168
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaa 39
||||||||||||| || ||||| ||| ||||||||||||
Sbjct: 2 aagtcaaacttctgtatctttgaccaagtttatagaaaa 40
>54651_sof-miR437:pmrd
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 152 tcaaagttagagaagtttgactta 175
||||||||||||||||||||||||
Sbjct: 126 tcaaagttagagaagtttgactta 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaacactcaaacatctagaatat 60
||||||||| ||| |||||||| || ||||||||||||| | | || |||||||||||
Sbjct: 2 aagtcaaacctctctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatat 61
Query: 61 ca 62
||
Sbjct: 62 ca 63
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| || |||| ||||||||
Sbjct: 148 aagtcaaacttctctaactttgatcaagtttttagaaaaa 109
>54508_sbi-miR437l:pmrd
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| ||| |||| ||||||||
Sbjct: 170 aagtcaaacttctctaactttggccaagtttttagaaaaa 131
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgactt 174
|||||||||| | || ||||||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggccaaagttagagaagtttgactt 170
>54505_sbi-miR437i:pmrd
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 3 gtcaaacttctttaactttgtccaggtttatagaaa 38
|||||||||||||||||||| ||| |||| ||||||
Sbjct: 1 gtcaaacttctttaactttgaccaagtttctagaaa 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| |||||||| | | |||||||||||||
Sbjct: 170 aagtcaaacttctctaactttgacaaagtttatagaaaaa 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 151 gtcaaagttagagaagtttgactt 174
||||||||||||||||||||||||
Sbjct: 147 gtcaaagttagagaagtttgactt 170
>54519_sbi-miR437w:pmrd
Length = 173
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 136 ttttctaaaagcacggtcaaagttagagaagtttgactt 174
|||||||||| | ||| |||||||||||||||||||||
Sbjct: 135 ttttctaaaaacttggtgaaagttagagaagtttgactt 173
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||| ||||||||
Sbjct: 173 aagtcaaacttctctaactttcaccaagtttttagaaaaa 134
>54513_sbi-miR437q:pmrd
Length = 160
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgacttag 176
|||||||||||||||||||||||
Sbjct: 138 aaagttagagaagtttgacttag 160
>54509_sbi-miR437m:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgacttag 176
|||||||||||||||||||||||
Sbjct: 152 aaagttagagaagtttgacttag 174
>55110_zma-miR437d:pmrd
Length = 179
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 aagttagagaagtttgacttag 176
||||||||||||||||||||||
Sbjct: 156 aagttagagaagtttgacttag 177
>54510_sbi-miR437n:pmrd
Length = 182
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactta 175
||||||||||||||||||||||
Sbjct: 160 aaagttagagaagtttgactta 181
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||| ||||||||
Sbjct: 180 aagtcaaacttctctaactttaaccaagtttgtagaaaaa 141
>51322_pci-miR437:pmrd
Length = 166
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 150 ggtcaaagttagagaagtttgactta 175
|||||||| |||||||||||||||||
Sbjct: 65 ggtcaaagctagagaagtttgactta 40
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaa 38
||||||||||||| || ||||| ||| |||||||||||
Sbjct: 41 aagtcaaacttctctagctttgaccaagtttatagaaa 78
>54501_sbi-miR437d:pmrd
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgactt 174
|||||||||||||||||||||
Sbjct: 114 aaagttagagaagtttgactt 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
||||||||||||| ||||||| ||| |||||||| ||||
Sbjct: 134 aagtcaaacttctctaactttaaccaagtttataggaaaa 95
>55113_zma-miR437g:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 aaagttagagaagtttgact 173
||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgact 173
>48328_bdi-miR2504b:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1 aagtcaaacttctttaactttgtccaggtttatagaaaaa 40
|||||||||||||| | |||| ||| |||||||||||||
Sbjct: 1 aagtcaaacttcttcatgtttgaccaagtttatagaaaaa 40
