miRNEST 2.0, an integrative microRNA resource :: BLAST
>54504_sbi-miR437g:pmrd
Length = 176
Score = 111 bits (56), Expect = 1e-25
Identities = 80/88 (90%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||| ||| ||||| ||||||| |||||| ||||||||||||||||| |||||||||||
Sbjct: 87 tcatagagaatttggtgaaactagtttgatgttgtagatgttgatgcaattttctataaa 146
Query: 87 cttggacaaagttagagaagtttgactt 114
||||| ||||||||||||||||||||||
Sbjct: 147 cttggtcaaagttagagaagtttgactt 174
>54500_sbi-miR437b:pmrd
Length = 171
Score = 89.7 bits (45), Expect = 4e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 119 agatgttggtgcatttttctataaacttggtcaaagttagagaagtttgactt 171
>54651_sof-miR437:pmrd
Length = 149
Score = 87.7 bits (44), Expect = 2e-18
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||||||| |||| ||| |||| ||||||||| ||||| ||| ||||||||||||||||
Sbjct: 89 tcatggagaatttaatggaactagtttgatattctagattttggtgcatttttctataaa 30
Query: 87 cttggacaaagttagagaagtttgactt 114
|||| |||||||||||| |||||||||
Sbjct: 29 cttgatcaaagttagagaggtttgactt 2
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| ||||||| ||||||||||||||||||||||
Sbjct: 109 tttttctaaaaacttgatcaaagttagagaagtttgactt 148
>54516_sbi-miR437t:pmrd
Length = 170
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 62 agatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 118 agatgtttgtgcatttttctataaacttggtcaaagttagagaagtttgactt 170
Score = 42.1 bits (21), Expect = 9e-05
Identities = 52/62 (83%), Gaps = 4/62 (6%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
|||||||||||||||||| || ||||||| ||||||| ||||| |||| |||||||
Sbjct: 58 tttgatattgtagatgttaatatatttttc----aacttggtcaaagatagacaagtttg 3
Query: 111 ac 112
||
Sbjct: 2 ac 1
>55112_zma-miR437f:pmrd
Length = 342
Score = 75.8 bits (38), Expect = 6e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 42 tgaaactgctttgatattgtagatgttgatgcattttt-ctataaacttggacaaagtta 100
|||||||| |||||| ||||| || || ||||||||| |||||||||||| ||||||||
Sbjct: 75 tgaaactgatttgatgttgtatatatttgtgcattttttctataaacttggtcaaagtta 16
Query: 101 gagaagtttgactt 114
||||||||||||||
Sbjct: 15 gagaagtttgactt 2
>55107_zma-miR437a:pmrd
Length = 342
Score = 75.8 bits (38), Expect = 6e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 42 tgaaactgctttgatattgtagatgttgatgcatttt-tctataaacttggacaaagtta 100
|||||||| |||||| ||||| || || |||||||| ||||||||||||| ||||||||
Sbjct: 268 tgaaactgatttgatgttgtatatatttgtgcattttttctataaacttggtcaaagtta 327
Query: 101 gagaagtttgactt 114
||||||||||||||
Sbjct: 328 gagaagtttgactt 341
>54512_sbi-miR437p:pmrd
Length = 188
Score = 73.8 bits (37), Expect = 2e-14
Identities = 77/89 (86%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcattttt-ctataa 85
|||||| | ||||||||||||| |||||| ||||| ||||| | ||||||| | ||||
Sbjct: 98 tcatggtggatttgatgaaactaatttgattttgtatgtgttggtccattttttcaataa 157
Query: 86 acttggacaaagttagagaagtttgactt 114
|||||| ||||||||||||||||||||||
Sbjct: 158 acttggtcaaagttagagaagtttgactt 186
>54503_sbi-miR437f:pmrd
Length = 174
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
|||| ||| ||| |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 116 ttgttgatcttggtgcacttttctataaacttggtcaaagttagagaagtttgactt 172
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 93 caaagttagagaagtttgact 113
|||||||||||||||||||||
Sbjct: 21 caaagttagagaagtttgact 1
>48988_osa-miR437:pmrd
Length = 213
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>48987_osa-miR437:pmrd
Length = 213
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>48986_osa-miR437:pmrd
Length = 213
Score = 73.8 bits (37), Expect = 2e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 135 atttttctataaacttggtcaaagttagagaagtttgactt 175
>54505_sbi-miR437i:pmrd
Length = 170
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 71 tgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 127 tgcatttttctataaactttgtcaaagttagagaagtttgactt 170
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 77 tttctataaacttggacaaagttagagaagtttgac 112
|||||| |||||||| |||||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
>54517_sbi-miR437u:pmrd
Length = 164
Score = 69.9 bits (35), Expect = 4e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 28 catggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaac 87
||||||| |||| |||||||| |||||| | ||||| ||| | ||||||||||||||
Sbjct: 78 catggagaatttaatgaaactaatttgatgtcatagatattggcgtatttttctataaac 137
Query: 88 ttggacaaagttagagaagtttgactt 114
|||| |||||||||||||||||||||
Sbjct: 138 ttggtgaaagttagagaagtttgactt 164
>54508_sbi-miR437l:pmrd
Length = 170
Score = 69.9 bits (35), Expect = 4e-13
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 60 gtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| || ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 116 gtagatgttaatatatttttctaaaaacttggccaaagttagagaagtttgactt 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 65 tgttgatgcatttttctataaacttggacaaagtta 100
||||| |||||||||||||||| |||| ||| ||||
Sbjct: 48 tgttggtgcatttttctataaatttggtcaatgtta 13
>54514_sbi-miR437r:pmrd
Length = 180
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 77 tttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||| ||||||||||||||||||||||
Sbjct: 141 tttctataaacttggccaaagttagagaagtttgactt 178
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 73 catttttctataaacttggacaaagttagagaagttt 109
|||||||||||| |||||| |||| | ||||||||||
Sbjct: 41 catttttctatagacttggtcaaaataagagaagttt 5
>54501_sbi-miR437d:pmrd
Length = 136
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 53 tgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgac 112
|||| ||||| || ||| |||||||| |||||||||||| |||||||||||||||||||
Sbjct: 73 tgatgttgtaaatattggtgcattttcctataaacttggttaaagttagagaagtttgac 132
Query: 113 tt 114
||
Sbjct: 133 tt 134
>54507_sbi-miR437k:pmrd
Length = 172
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 130 atttttctaaaaacttggtcaaagttagagaagtttgactt 170
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 65 tgttgatgcatttttctataaacttggacaaagttagagaagtttgac 112
||||| || |||||||||||| |||| ||||||||||||||||||||
Sbjct: 50 tgttggtgtatttttctataagtttggtcaaagttagagaagtttgac 3
>54506_sbi-miR437j:pmrd
Length = 172
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagagaagtttgac 112
|||||||||||||||| ||||||||||||||||||||
Sbjct: 37 ttttctataaacttggtcaaagttagagaagtttgac 1
Score = 58.0 bits (29), Expect = 1e-09
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 58 ttgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||| ||| |||||| | |||| ||| ||||||||||||||||||||||
Sbjct: 116 ttgtagatgttaatgtattttttgaaaaacatggtcaaagttagagaagtttgactt 172
>54515_sbi-miR437s:pmrd
Length = 176
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||| |||||||||||| |||||||||||||
Sbjct: 40 tttttctataaacctggacaaagttaaagaagtttgactt 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 caaagttagagaagtttgactt 114
||||||||||||||||||||||
Sbjct: 153 caaagttagagaagtttgactt 174
>54526_sbi-miR1435a:pmrd
Length = 287
Score = 61.9 bits (31), Expect = 9e-11
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||||||| |||| ||||||| ||||| |||||||||||||||||| ||||| ||||
Sbjct: 157 tcatggaggatttaatgaaacaaacttgatgttgtagatgttgatgcatctttctgtaaa 216
Query: 87 cttggacaaag 97
||||| |||||
Sbjct: 217 cttggtcaaag 227
>51322_pci-miR437:pmrd
Length = 166
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 77 tttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||| ||||| ||||||||||||||||
Sbjct: 78 tttctataaacttggtcaaagctagagaagtttgactt 41
>55111_zma-miR437e:pmrd
Length = 182
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| | |||||| |||||||||||||
Sbjct: 140 atttttctataaacttggtcgaagttaaagaagtttgactt 180
>54519_sbi-miR437w:pmrd
Length = 173
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttgg 91
|||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 60 tttgatgttggaaatgttgatgcatttttctataaacttgg 20
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| |||||||| |||||||||||||||||||||
Sbjct: 134 tttttctaaaaacttggtgaaagttagagaagtttgactt 173
>54510_sbi-miR437n:pmrd
Length = 182
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 140 atttttctacaaacttggttaaagttagagaagtttgactt 180
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagaga 104
|||||||||||||||| ||||||| ||||
Sbjct: 39 ttttctataaacttggtcaaagttggaga 11
>54502_sbi-miR437e:pmrd
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||| |||||||| ||||||||||||||||||||||
Sbjct: 61 atttttctgaaaacttggtcaaagttagagaagtttgactt 101
>55110_zma-miR437d:pmrd
Length = 179
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 72 gcatttttctataaacttggacaaagttagagaagtttgactt 114
||||||||||||||| ||| | ||||||||||||||||||||
Sbjct: 133 gcatttttctataaatttgatctaagttagagaagtttgactt 175
>55108_zma-miR437b:pmrd
Length = 168
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||| ||||| || |||||||||||||
Sbjct: 40 ttttctataaacttggtcaaagatacagaagtttgactt 2
Score = 52.0 bits (26), Expect = 9e-08
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 73 catttttctataaacttggacaaagttagagaagtttgactt 114
||||| |||| ||||||| ||||||||||||||||||||||
Sbjct: 126 catttctctagaaacttgttcaaagttagagaagtttgactt 167
>54509_sbi-miR437m:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 9e-08
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 51 tttgatattgtagatgttgatgcatttttctataaacttggacaaagttagagaagtttg 110
||||||||| ||||||||| |||||||||||| |||||| ||||||||| ||||||
Sbjct: 62 tttgatattctagatgttggtgcatttttctagtaacttgtttaaagttagatgagtttg 3
Query: 111 ac 112
||
Sbjct: 2 ac 1
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/41 (90%), Gaps = 2/41 (4%)
Strand = Plus / Plus
Query: 76 ttttctataaacttggacaaa--gttagagaagtttgactt 114
||||||| |||||||| |||| ||||||||||||||||||
Sbjct: 132 ttttctaaaaacttggtcaaaaagttagagaagtttgactt 172
>54511_sbi-miR437o:pmrd
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 75 tttttctataaacttggacaaagttagagaagtttgactt 114
||||| || |||||| | ||||||||||||||||||||||
Sbjct: 134 tttttataaaaacttagtcaaagttagagaagtttgactt 173
Score = 42.1 bits (21), Expect = 9e-05
Identities = 51/61 (83%)
Strand = Plus / Minus
Query: 27 tcatggagcatttgatgaaactgctttgatattgtagatgttgatgcatttttctataaa 86
|||| ||| |||| |||||||| |||||| ||||||| | || |||||||||||| |||
Sbjct: 85 tcatagagaatttaatgaaactaatttgatgttgtagaggatggtgcatttttctaaaaa 26
Query: 87 c 87
|
Sbjct: 25 c 25
>55109_zma-miR437c:pmrd
Length = 177
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 74 atttttctataaacttggacaaagttagagaagtttgac 112
||||||| | || ||||| ||||||||||||||||||||
Sbjct: 139 atttttcaaaaagcttggtcaaagttagagaagtttgac 177
Score = 42.1 bits (21), Expect = 9e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 76 ttttctataaacttggacaaagttagagaagtttgac 112
|||||||||||||||| ||||| | |||||||||||
Sbjct: 37 ttttctataaacttggtcaaagctgaagaagtttgac 1
>54513_sbi-miR437q:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 77 tttctataaacttggacaaagttagagaagtttgactt 114
|||||||| | |||| |||||||||||||||||||||
Sbjct: 121 tttctatagagttggtaaaagttagagaagtttgactt 158
>48328_bdi-miR2504b:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 74 atttttctataaacttggacaaagttagagaagtttgactt 114
|||||||||||||||||| |||| | |||||||||||||
Sbjct: 41 atttttctataaacttggtcaaacatgaagaagtttgactt 1
>55113_zma-miR437g:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 aaagttagagaagtttgact 113
||||||||||||||||||||
Sbjct: 154 aaagttagagaagtttgact 173
