miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>54920_zma-miR156j:pmrd
          Length = 125

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 321 cgatgacagaagagagagagcac 343
           |||||||||||||||||||||||
Sbjct: 18  cgatgacagaagagagagagcac 40




>54657_stu-miR156b:pmrd
          Length = 382

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 361 gatgacagaagagagagagcac 382




>54396_sbi-miR156d:pmrd
          Length = 125

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 19  gatgacagaagagagagagcac 40




>51340_ppd-miR156:pmrd
          Length = 146

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 125 gatgacagaagagagagagcac 146




>48811_osa-miR156k:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 9   gatgacagaagagagagagcac 30




>48535_gma-miR156h:pmrd
          Length = 147

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 126 gatgacagaagagagagagcac 147




>48534_gma-miR156g:pmrd
          Length = 209

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 188 gatgacagaagagagagagcac 209




>48472_csi-miR156b:pmrd
          Length = 515

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 494 gatgacagaagagagagagcac 515




>48470_cru-miR156:pmrd
          Length = 67

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 46  gatgacagaagagagagagcac 67




>48426_cpt-miR156b:pmrd
          Length = 185

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 9   gatgacagaagagagagagcac 30




>46919_ath-miR156o:pmrd
          Length = 245

 Score = 44.1 bits (22), Expect = 7e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 322 gatgacagaagagagagagcac 343
           ||||||||||||||||||||||
Sbjct: 224 gatgacagaagagagagagcac 245




>48492_ghr-miR157:pmrd
          Length = 152

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 323 atgacagaagagagagagcac 343
           |||||||||||||||||||||
Sbjct: 1   atgacagaagagagagagcac 21