miRNEST 2.0, an integrative microRNA resource :: BLAST
>54999_zma-miR168a:pmrd
Length = 104
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacg 63
Query: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
|||||||||||||||||||||||||||||||||||
Sbjct: 64 gatcccgccttgcaccaagtgaatcggagccggcg 98
>55000_zma-miR168b:pmrd
Length = 104
Score = 184 bits (93), Expect = 8e-48
Identities = 99/101 (98%)
Strand = Plus / Plus
Query: 2 ccgccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggccgacggga 61
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccgccgcgccgtctcgggctcgcttggtgcagatcgggacccgccgcccggccgacggga 61
Query: 62 cggatcccgccttgcaccaagtgaatcggagccggcgcagc 102
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 62 cggatcccgccttgcatcaagtgaatcggagccggcgcagc 102
>54637_sof-miR168b:pmrd
Length = 103
Score = 159 bits (80), Expect = 5e-40
Identities = 87/88 (98%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 17 gggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 76
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 75
Query: 77 accaagtgaatcggagccggcgcagcca 104
||||||||||||||||||||||||||||
Sbjct: 76 accaagtgaatcggagccggcgcagcca 103
>54436_sbi-miR168:pmrd
Length = 106
Score = 131 bits (66), Expect = 1e-31
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 1 gccgccgcgccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacg 58
|||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||
Sbjct: 1 gccgccgcgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacg 60
Query: 59 ggacggatcccgccttgcaccaagtgaatcggagccggcgcagcc 103
|||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 61 ggacagatcccgccttgcaccaagtgaatccgagccggagcagcc 105
>55002_zma-miR168m:pmrd
Length = 65
Score = 129 bits (65), Expect = 4e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 60
Query: 81 agtga 85
|||||
Sbjct: 61 agtga 65
>54655_ssp-miR168:pmrd
Length = 65
Score = 129 bits (65), Expect = 4e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 60
Query: 81 agtga 85
|||||
Sbjct: 61 agtga 65
>48873_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 69 cgccttgcaccaagtgaatcggagccg 95
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>48872_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 69 cgccttgcaccaagtgaatcggagccg 95
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>48871_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 81/87 (93%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 11 cgcctcgggctcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcc 68
||||||||||||||||||||||||||||||||||||||| | || | | ||| |||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 69 cgccttgcaccaagtgaatcggagccg 95
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>48661_hvv-miR168:pmrd
Length = 66
Score = 91.7 bits (46), Expect = 9e-20
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggatcccgccttgcacc 79
||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 60
Query: 80 aagtga 85
||||||
Sbjct: 61 aagtga 66
>55001_zma-miR168c:pmrd
Length = 67
Score = 77.8 bits (39), Expect = 1e-15
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcagatcgggacccgccgcccggc-cgacgggacggatcccg-ccttgcac 78
||||||| |||||||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 1 tcgcttgttgcagatcgggacccgccgccccgcgcgacgggacggatcccgcccttgcat 60
Query: 79 caagtga 85
|||||||
Sbjct: 61 caagtga 67
>48875_osa-miR168m:pmrd
Length = 67
Score = 69.9 bits (35), Expect = 3e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 21 tcgcttggtgcagatcgggacccgccgcc-cggccgac-gggacggatcccgccttgcac 78
||||||||||||||||||||||||||||| | || | | ||| |||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgccttgcac 60
Query: 79 caagtga 85
|||||||
Sbjct: 61 caagtga 67
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 64 gatcccgccttgcaccaagtgaatcggagccggc 97
|||||||||||||| ||| |||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagacggc 132
>51651_ptc-miR168b:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcggag 92
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcgga 91
||||||||||||||| ||| |||||||||
Sbjct: 94 ggatcccgccttgcatcaactgaatcgga 122
>46957_ath-miR168a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 63 ggatcccgccttgcaccaagtgaatcgga 91
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
