miRNEST 2.0, an integrative microRNA resource :: BLAST
>54636_sof-miR168a:pmrd
Length = 104
Score = 159 bits (80), Expect = 5e-40
Identities = 87/88 (98%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 75
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 76
Query: 76 accaagtgaatcggagccggcgcagcca 103
||||||||||||||||||||||||||||
Sbjct: 77 accaagtgaatcggagccggcgcagcca 104
>55000_zma-miR168b:pmrd
Length = 104
Score = 155 bits (78), Expect = 7e-39
Identities = 95/98 (96%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 6 ccgcgccgtct-gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacgg 63
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 ccgcgccgtctcgggctcgcttggtgcagatcgggacccgccgcccggccgacgggacgg 64
Query: 64 atcccgccttgcaccaagtgaatcggagccggcgcagc 101
||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 atcccgccttgcatcaagtgaatcggagccggcgcagc 102
>54999_zma-miR168a:pmrd
Length = 104
Score = 147 bits (74), Expect = 2e-36
Identities = 81/82 (98%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 75
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gggctcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgc 76
Query: 76 accaagtgaatcggagccggcg 97
||||||||||||||||||||||
Sbjct: 77 accaagtgaatcggagccggcg 98
>55002_zma-miR168m:pmrd
Length = 65
Score = 113 bits (57), Expect = 3e-26
Identities = 64/65 (98%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 21 tcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 79
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 60
Query: 80 agtga 84
|||||
Sbjct: 61 agtga 65
>54655_ssp-miR168:pmrd
Length = 65
Score = 113 bits (57), Expect = 3e-26
Identities = 64/65 (98%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 21 tcgcttgg-gcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 79
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggccgacgggacggatcccgccttgcacca 60
Query: 80 agtga 84
|||||
Sbjct: 61 agtga 65
>54436_sbi-miR168:pmrd
Length = 106
Score = 83.8 bits (42), Expect = 2e-17
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcccggcc--gacgggacggatcccgcctt 73
|||||||||||| ||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 17 gggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcctt 76
Query: 74 gcaccaagtgaatcggagccggcgcagcc 102
|||||||||||||| ||||||| ||||||
Sbjct: 77 gcaccaagtgaatccgagccggagcagcc 105
>48873_osa-miR168a:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 9e-17
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcc-cggccgacgggac-ggatcccgcctt 73
|||||||||||| |||||||||||||||||||| | || | |||| | ||||||||||||
Sbjct: 7 gggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgcctt 66
Query: 74 gcaccaagtgaatcggagccg 94
|||||||||||||||||||||
Sbjct: 67 gcaccaagtgaatcggagccg 87
>48872_osa-miR168a:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 9e-17
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcc-cggccgacgggac-ggatcccgcctt 73
|||||||||||| |||||||||||||||||||| | || | |||| | ||||||||||||
Sbjct: 7 gggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgcctt 66
Query: 74 gcaccaagtgaatcggagccg 94
|||||||||||||||||||||
Sbjct: 67 gcaccaagtgaatcggagccg 87
>48871_osa-miR168a:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 9e-17
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 17 gggctcgcttgg-gcagatcgggacccgccgcc-cggccgacgggac-ggatcccgcctt 73
|||||||||||| |||||||||||||||||||| | || | |||| | ||||||||||||
Sbjct: 7 gggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgcctt 66
Query: 74 gcaccaagtgaatcggagccg 94
|||||||||||||||||||||
Sbjct: 67 gcaccaagtgaatcggagccg 87
>48661_hvv-miR168:pmrd
Length = 66
Score = 75.8 bits (38), Expect = 6e-15
Identities = 61/66 (92%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 21 tcgcttgg-gcagatcgggacccgccgcccggcc-gacgggacggatcccgccttgcacc 78
|||||||| |||||||||||||| ||||||| || |||||| ||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 60
Query: 79 aagtga 84
||||||
Sbjct: 61 aagtga 66
>55001_zma-miR168c:pmrd
Length = 67
Score = 67.9 bits (34), Expect = 1e-12
Identities = 54/58 (93%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 29 gcagatcgggacccgccgcccggc-cgacgggacggatcccg-ccttgcaccaagtga 84
||||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||
Sbjct: 10 gcagatcgggacccgccgccccgcgcgacgggacggatcccgcccttgcatcaagtga 67
>48875_osa-miR168m:pmrd
Length = 67
Score = 54.0 bits (27), Expect = 2e-08
Identities = 60/67 (89%), Gaps = 3/67 (4%)
Strand = Plus / Plus
Query: 21 tcgcttgg-gcagatcgggacccgccgcc-cggccgacgggac-ggatcccgccttgcac 77
|||||||| |||||||||||||||||||| | || | |||| | ||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgccttgcac 60
Query: 78 caagtga 84
|||||||
Sbjct: 61 caagtga 67
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 63 gatcccgccttgcaccaagtgaatcggagccggc 96
|||||||||||||| ||| |||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagacggc 132
>51651_ptc-miR168b:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 ggatcccgccttgcaccaagtgaatcggag 91
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 ggatcccgccttgcaccaagtgaatcggag 91
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 ggatcccgccttgcaccaagtgaatcggag 91
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 62 ggatcccgccttgcaccaagtgaatcgga 90
||||||||||||||| ||| |||||||||
Sbjct: 94 ggatcccgccttgcatcaactgaatcgga 122
>46957_ath-miR168a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 62 ggatcccgccttgcaccaagtgaatcgga 90
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
