miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51747_ptc-miR399a:pmrd
          Length = 120

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 74  taagctcactgccaaaggagatttgcccctcaattca 110
           ||||||| ||||||||||||||||||||| |||||||
Sbjct: 82  taagctcgctgccaaaggagatttgccccgcaattca 118




>51751_ptc-miR399e:pmrd
          Length = 114

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 77  gctcactgccaaaggagatttgcccctcaattca 110
           |||||||||||||| ||||||||||| |||||||
Sbjct: 79  gctcactgccaaagaagatttgccccgcaattca 112




>51750_ptc-miR399d:pmrd
          Length = 114

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 77  gctcactgccaaaggagatttgcccctcaattc 109
           |||||||||||||| ||||||||||| ||||||
Sbjct: 79  gctcactgccaaagaagatttgccccgcaattc 111




>47018_ath-miR399d:pmrd
          Length = 100

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 82  ctgccaaaggagatttgcccctcaattca 110
           ||||||||||||||||||||| |||||||
Sbjct: 69  ctgccaaaggagatttgccccgcaattca 97




>47535_ath-miRf10435-akr:pmrd
          Length = 92

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 82  ctgccaaaggagatttgcccctcaattc 109
           ||||||||||||||||||||| ||||||
Sbjct: 65  ctgccaaaggagatttgccccgcaattc 92




>54493_sbi-miR399e:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 80  cactgccaaaggagatttgccc 101
           ||||||||||||||||||||||
Sbjct: 84  cactgccaaaggagatttgccc 105




>47020_ath-miR399f:pmrd
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 76  agctcactgccaaaggagatttgccc 101
           ||||| ||||||||||||||||||||
Sbjct: 81  agctctctgccaaaggagatttgccc 106




>48755_mtr-miR399f:pmrd
          Length = 81

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 78  ctcactgccaaaggagatttgcccc 102
           ||||||||||||| |||||||||||
Sbjct: 56  ctcactgccaaagaagatttgcccc 80




>54881_vvi-miR399e:pmrd
          Length = 112

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 81  ctgccaaaggagatttgccc 100




>54494_sbi-miR399f:pmrd
          Length = 120

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 80  ctgccaaaggagatttgccc 99




>49373_osa-miRf10158-akr:pmrd
          Length = 112

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 84  ctgccaaaggagatttgccc 103




>48970_osa-miR399g:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 88  ctgccaaaggagatttgccc 107




>48969_osa-miR399f:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 86  ctgccaaaggagatttgccc 105




>48968_osa-miR399e:pmrd
          Length = 118

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 87  ctgccaaaggagatttgccc 106




>48754_mtr-miR399e:pmrd
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 94  ctgccaaaggagatttgccc 113




>48750_mtr-miR399a:pmrd
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 94  ctgccaaaggagatttgccc 113




>48377_bna-miR399:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 80  ctgccaaaggagatttgccc 99




>47015_ath-miR399a:pmrd
          Length = 123

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  ctgccaaaggagatttgccc 101
           ||||||||||||||||||||
Sbjct: 92  ctgccaaaggagatttgccc 111