miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>55006_zma-miR169d:pmrd
Length = 128
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatgtcctttgtttacaaaggacctgaatgtgtggaccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tagccaaggatgacttgcctatgtcctttgtttacaaaggacctgaatgtgtggaccatt 50
Query: 61 gagaggttcataggcagtctccttggcta 89
|||||||||||||||||||||||||||||
Sbjct: 49 gagaggttcataggcagtctccttggcta 21
>55014_zma-miR169l:pmrd
Length = 89
Score = 99.6 bits (50), Expect = 3e-22
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcctttgtttacaaaggacctgaatgtgtggaccatt 60
||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||
Sbjct: 1 tagccaaggatgacttgcctatgtcctttgtttacaaaggatcagaat-tgtggaccttt 59
Query: 61 gag-aggttcataggcagtctccttggcta 89
| | ||||| |||||||||||||||||||
Sbjct: 60 gtgttggttcgtaggcagtctccttggcta 89
>55010_zma-miR169h:pmrd
Length = 128
Score = 99.6 bits (50), Expect = 3e-22
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcctttgtttacaaaggacctgaatgtgtggaccatt 60
||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||
Sbjct: 21 tagccaaggatgacttgcctatgtcctttgtttacaaaggatcagaat-tgtggaccttt 79
Query: 61 gag-aggttcataggcagtctccttggcta 89
| | ||||| |||||||||||||||||||
Sbjct: 80 gtgttggttcgtaggcagtctccttggcta 109
>55007_zma-miR169e:pmrd
Length = 128
Score = 99.6 bits (50), Expect = 3e-22
Identities = 82/90 (91%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatgtcctttgtttacaaaggacctgaatgtgtggaccatt 60
||||||||||||||||||||||||||||||||||||||||| | |||| |||||||| ||
Sbjct: 109 tagccaaggatgacttgcctatgtcctttgtttacaaaggatcagaat-tgtggaccttt 51
Query: 61 gag-aggttcataggcagtctccttggcta 89
| | ||||| |||||||||||||||||||
Sbjct: 50 gtgttggttcgtaggcagtctccttggcta 21
>54448_sbi-miR169l:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatgtcctttgt 31
|||||||||||||||||||| ||||||||||
Sbjct: 94 tagccaaggatgacttgcctgtgtcctttgt 64
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 65 ggttcataggcagtctccttggcta 89
|||||||||||||||||||||||||
Sbjct: 27 ggttcataggcagtctccttggcta 3
>48884_osa-miR169i:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 ggttcataggcagtctccttggcta 89
|||||||||||||||||||||||||
Sbjct: 74 ggttcataggcagtctccttggcta 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcctt 28
|||||||||||||||||||| |||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtcctt 38
>48883_osa-miR169h:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcctt 28
|||||||||||||||||||| |||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtcctt 38
>54450_sbi-miR169n:pmrd
Length = 93
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcct 27
|||||||||||||||||||||| ||||
Sbjct: 3 tagccaaggatgacttgcctatatcct 29
>54449_sbi-miR169m:pmrd
Length = 92
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcct 27
|||||||||||||||||||||| ||||
Sbjct: 1 tagccaaggatgacttgcctatatcct 27
>51675_ptc-miR169r:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcct 27
|||||||||||||||||||||| ||||
Sbjct: 11 tagccaaggatgacttgcctatttcct 37
>48892_osa-miR169q:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcctatgtcct 27
|||||||||||||||||||| ||||||
Sbjct: 98 tagccaaggatgacttgcctgtgtcct 72
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 65 ggttcataggcagtctccttggcta 89
||||||| |||||||||||||||||
Sbjct: 35 ggttcatgggcagtctccttggcta 11
>48887_osa-miR169l:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtcct 27
|||||||||||||||||||| ||||||
Sbjct: 11 tagccaaggatgacttgcctgtgtcct 37
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 ggttcataggcagtctccttggcta 89
||||||| |||||||||||||||||
Sbjct: 74 ggttcatgggcagtctccttggcta 98
>48882_osa-miR169g:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcctat 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 ataggcagtctccttggcta 89
||||||||||||||||||||
Sbjct: 96 ataggcagtctccttggcta 115
>48354_bna-miR169e:pmrd
Length = 276
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 251 tagccaaggatgacttgcctat 272
>48352_bna-miR169c:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctat 22
||||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgcctat 47
>55009_zma-miR169g:pmrd
Length = 140
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>55008_zma-miR169f:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>54826_vvi-miR169x:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgccta 32
>54550_sly-miR169d:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 39 tagccaaggatgacttgccta 59
>54440_sbi-miR169d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgccta 41
>48885_osa-miR169j:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgtc 25
|||||||||||||||||||| ||||
Sbjct: 11 tagccaaggatgacttgcctgtgtc 35
>48881_osa-miR169f:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgccta 31
>48355_bna-miR169f:pmrd
Length = 201
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 31 tagccaaggatgacttgccta 51
>48353_bna-miR169d:pmrd
Length = 220
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgccta 60
>46874_aqc-miR169b:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 65 ggttcataggcagtctccttggcta 89
|||| ||||||||||||||||||||
Sbjct: 154 ggttaataggcagtctccttggcta 178
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 1 tagccaaggatgacttgcct 20
>46873_aqc-miR169a:pmrd
Length = 158
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgccta 21
|||||||||||||||||||||
Sbjct: 26 tagccaaggatgacttgccta 46
>55013_zma-miR169k:pmrd
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55012_zma-miR169j:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>55011_zma-miR169i:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54807_vvi-miR169e:pmrd
Length = 149
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcct 31
>54548_sly-miR169b:pmrd
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 171 tagccaaggatgacttgcct 190
>54444_sbi-miR169h:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54443_sbi-miR169g:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54442_sbi-miR169f:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>54441_sbi-miR169e:pmrd
Length = 240
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 21 tagccaaggatgacttgcct 40
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34
>51678_ptc-miR169u:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 ggttcataggcagtctcctt 84
||||||||||||||||||||
Sbjct: 89 ggttcataggcagtctcctt 108
>51670_ptc-miR169m:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51669_ptc-miR169l:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51667_ptc-miR169j:pmrd
Length = 137
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>51666_ptc-miR169i:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48889_osa-miR169n:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcctatgt 24
|||||||| |||||||||||||||
Sbjct: 11 tagccaagaatgacttgcctatgt 34
>48888_osa-miR169m:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48886_osa-miR169k:pmrd
Length = 156
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 11 tagccaaggatgacttgcct 30
>48487_ghb-miR169a:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 50 tagccaaggatgacttgcct 69
>48361_bna-miR169l:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 25 tagccaaggatgacttgcct 44
>48360_bna-miR169k:pmrd
Length = 155
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 34 tagccaaggatgacttgcct 53
>48359_bna-miR169j:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 9 tagccaaggatgacttgcct 28
>48358_bna-miR169i:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 15 tagccaaggatgacttgcct 34
>48357_bna-miR169h:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56
>48356_bna-miR169g:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 37 tagccaaggatgacttgcct 56
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 121 tagccaaggatgacttgcct 102
>46974_ath-miR169n:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 45 tagccaaggatgacttgcct 64
>46973_ath-miR169m:pmrd
Length = 212
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 42 tagccaaggatgacttgcct 61
>46972_ath-miR169l:pmrd
Length = 211
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 44 tagccaaggatgacttgcct 63
>46971_ath-miR169k:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 43 tagccaaggatgacttgcct 62
>46970_ath-miR169j:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 51 tagccaaggatgacttgcct 70
>46969_ath-miR169i:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 40 tagccaaggatgacttgcct 59
>46968_ath-miR169h:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tagccaaggatgacttgcct 20
||||||||||||||||||||
Sbjct: 46 tagccaaggatgacttgcct 65
