miRNEST 2.0, an integrative microRNA resource :: BLAST
>53831_ptc-miRf12009-akr:pmrd
Length = 138
Score = 196 bits (99), Expect = 4e-51
Identities = 131/141 (92%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 22 catgaagataagagcttgtttggtagccaaggacgacttgtccgccaccatcttagttag 81
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 1 catgaagataagagcttgtttggtagccaaggacgacttgcccaccaccatcttagttgg 60
Query: 82 ttccagtataatattactgggcaccttccatttggttttgggcaagcaccttggctaact 141
|||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gtccaatata---ttactgggcaccttccatttggttttgggcaagcaccttggctagct 117
Query: 142 gacaagctcttatcaatcatg 162
||||| |||||||||||||||
Sbjct: 118 gacaaactcttatcaatcatg 138
>53746_ptc-miRf11924-akr:pmrd
Length = 138
Score = 188 bits (95), Expect = 1e-48
Identities = 130/141 (92%), Gaps = 3/141 (2%)
Strand = Plus / Plus
Query: 22 catgaagataagagcttgtttggtagccaaggacgacttgtccgccaccatcttagttag 81
|||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| |
Sbjct: 1 catgaagataagagcttgtttggtagccaaggacgacttgcccaccaccatctcagttgg 60
Query: 82 ttccagtataatattactgggcaccttccatttggttttgggcaagcaccttggctaact 141
|||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 61 gtccaatata---ttactgggcaccttccatttggttttgggcaagcaccttggctagct 117
Query: 142 gacaagctcttatcaatcatg 162
||||| |||||||||||||||
Sbjct: 118 gacaaactcttatcaatcatg 138
>51658_ptc-miR169af:pmrd
Length = 107
Score = 147 bits (74), Expect = 3e-36
Identities = 100/108 (92%), Gaps = 3/108 (2%)
Strand = Plus / Plus
Query: 38 tgtttggtagccaaggacgacttgtccgccaccatcttagttagttccagtataatatta 97
|||||||||||||||||||||||| || |||||||||||||| | ||||||||| |||
Sbjct: 3 tgtttggtagccaaggacgacttgcccaccaccatcttagttgggtccagtata---tta 59
Query: 98 ctgggcaccttccatttggttttgggcaagcaccttggctaactgaca 145
||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 60 ctgggcaccttccatttggttttgggcaagcaccttggctagctgaca 107
>51657_ptc-miR169ae:pmrd
Length = 107
Score = 143 bits (72), Expect = 5e-35
Identities = 101/110 (91%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttgtccgccaccatcttagttagttccagtataatat 95
|||||||||||||||||||||||||| || |||||||||||||| | |||| |||| |
Sbjct: 1 cttgtttggtagccaaggacgacttgcccaccaccatcttagttgggtccaatata---t 57
Query: 96 tactgggcaccttccatttggttttgggcaagcaccttggctaactgaca 145
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 58 tactgggcaccttccatttggttttgggcaagcaccttggctagctgaca 107
>51654_ptc-miR169ab:pmrd
Length = 107
Score = 135 bits (68), Expect = 1e-32
Identities = 100/110 (90%), Gaps = 3/110 (2%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttgtccgccaccatcttagttagttccagtataatat 95
|||||||||||||||||||||||||| || ||||||||| |||| | |||| |||| |
Sbjct: 1 cttgtttggtagccaaggacgacttgcccaccaccatctcagttgggtccaatata---t 57
Query: 96 tactgggcaccttccatttggttttgggcaagcaccttggctaactgaca 145
||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 58 tactgggcaccttccatttggttttgggcaagcaccttggctagctgaca 107
>48487_ghb-miR169a:pmrd
Length = 189
Score = 46.1 bits (23), Expect = 9e-06
Identities = 40/43 (93%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 21 acatgaagataa-gag-cttgtttggtagccaaggacgacttg 61
|||||||||||| ||| ||||||||||||||||||| ||||||
Sbjct: 24 acatgaagataaagagtcttgtttggtagccaaggatgacttg 66
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttg 61
||||||||||||||||||| ||||||
Sbjct: 6 cttgtttggtagccaaggatgacttg 31
>51670_ptc-miR169m:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttg 61
||||||||||||||||||| ||||||
Sbjct: 2 cttgtttggtagccaaggatgacttg 27
>51668_ptc-miR169k:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttg 61
||||||||||||||||||| ||||||
Sbjct: 2 cttgtttggtagccaaggatgacttg 27
>51666_ptc-miR169i:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 36 cttgtttggtagccaaggacgacttg 61
||||||||||||||||||| ||||||
Sbjct: 2 cttgtttggtagccaaggatgacttg 27
>51680_ptc-miR169w:pmrd
Length = 109
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 tgtttggtagccaaggacgacttg 61
||||||||||||||||| ||||||
Sbjct: 3 tgtttggtagccaaggatgacttg 26
>51679_ptc-miR169v:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 tgtttggtagccaaggacgacttg 61
||||||||||||||||| ||||||
Sbjct: 3 tgtttggtagccaaggatgacttg 26
>51656_ptc-miR169ad:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 38 tgtttggtagccaaggacgacttg 61
|||| |||||||||||||||||||
Sbjct: 3 tgttcggtagccaaggacgacttg 26
