miRNEST 2.0, an integrative microRNA resource :: BLAST
>48791_oba-miR160:pmrd
Length = 90
Score = 163 bits (82), Expect = 4e-41
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 19 ttgtgcctggctccctgtatgccactggcttagaaactaatctatcaatagattagctac 78
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 1 ttgtgcctggctccctgtatgccactggcttagaaactaatctaccaatagattatctac 60
Query: 79 ggcgggtggcgtgcgaggagccaagcatac 108
||||||||||||||||||||||||||||||
Sbjct: 61 ggcgggtggcgtgcgaggagccaagcatac 90
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 74 ggtggcgtgcgaggagccaagcatactctc 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgccac 33
>51611_ptc-miR160d:pmrd
Length = 103
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 73 ggtggcgtgcgaggagccaagcatactctc 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51608_ptc-miR160a:pmrd
Length = 102
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 83 ggtggcgtgcgaggagccaagcatactctc 112
||||||||||||||||||||||||||||||
Sbjct: 72 ggtggcgtgcgaggagccaagcatactctc 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>54780_vvi-miR160c:pmrd
Length = 106
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 80 gcgggtggcgtgcgaggagccaagcatac 108
|||||||||||||||||||||||||||||
Sbjct: 69 gcgggtggcgtgcgaggagccaagcatac 97
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 gttgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||||
Sbjct: 7 gttgtgcctggctccctgtatgccac 32
>54407_sbi-miR160d:pmrd
Length = 100
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccactggcttag 51
||||||||||||||||||||||| ||||||
Sbjct: 1 tgcctggctccctgtatgccactcgcttag 30
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagca 105
|||| |||| |||||||||||||||||||||
Sbjct: 70 ctactgcggatggcgtgcgaggagccaagca 100
>54940_zma-miR160c:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>48828_osa-miR160c:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccact 44
|||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccact 29
>54939_zma-miR160b:pmrd
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgccac 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 78 gggtggcgtgcaaggagccaagcat 102
>54675_tae-miR160:pmrd
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 81 ctaccgcggatggcgtgcgaggagccaagcat 112
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccact 44
>48833_osa-miR160n:pmrd
Length = 131
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 100 ctactgcggatggcgtgcgaggagccaagcat 131
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>48829_osa-miR160d:pmrd
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 75 ctacggcgggtggcgtgcgaggagccaagcat 106
|||| |||| ||||||||||||||||||||||
Sbjct: 107 ctactgcggatggcgtgcgaggagccaagcat 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccact 30
>48827_osa-miR160b:pmrd
Length = 139
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccact 44
||||||||||||||||||||||||
Sbjct: 29 gtgcctggctccctgtatgccact 52
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcat 112
>48826_osa-miR160a:pmrd
Length = 88
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagcat 106
||||||||||| |||||||||||||
Sbjct: 62 gggtggcgtgcaaggagccaagcat 86
>54946_zma-miR160i:pmrd
Length = 81
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccact 24
>54942_zma-miR160e:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccact 31
>54941_zma-miR160d:pmrd
Length = 142
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccact 43
>54938_zma-miR160a:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 9 gtgcctggctccctgtatgccac 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>54408_sbi-miR160e:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>54406_sbi-miR160c:pmrd
Length = 83
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>51610_ptc-miR160c:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51363_ppt-miR160e:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccact 52
>48832_osa-miR160m:pmrd
Length = 82
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccact 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagca 105
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>48704_mtr-miR160e:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48542_gma-miR160a:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>46935_ath-miR160b:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccac 43
|||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccac 26
>54947_zma-miR160m:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagca 105
||||||||||| ||||||||||||
Sbjct: 58 gggtggcgtgcaaggagccaagca 81
>54945_zma-miR160h:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54944_zma-miR160g:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54405_sbi-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 82 gggtggcgtgcgaggagccaagca 105
||||||||||| ||||||||||||
Sbjct: 59 gggtggcgtgcaaggagccaagca 82
>54404_sbi-miR160a:pmrd
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>51334_pga-miR160:pmrd
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>46936_ath-miR160c:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>46865_aqc-miR160b:pmrd
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccactggcttag 51
||||||||||||||||||||| | ||||||
Sbjct: 1 tgcctggctccctgtatgccatttgcttag 30
>54783_vvi-miR160f:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gcctggctccctgtatgccac 43
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>48397_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24