miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 49/55 (89%), Gaps = 2/55 (3%)
 Strand = Plus / Plus

                                                                  
Query: 87  ctactccctccgttctaaaatacatgactcaacttcgtagtataaagttgagtca 141
           ||||||||||||| | ||||||  |||||||||||  ||||||||||||||||||
Sbjct: 5   ctactccctccgtcccaaaataagtgactcaactt--tagtataaagttgagtca 57




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 85  tactactccctccgttctaaaatacatgactcaactt 121
           ||||||||||||||||| | |||| ||||||||||||
Sbjct: 116 tactactccctccgttccagaatagatgactcaactt 80




>46908_ata-miR1120:pmrd
          Length = 85

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 94  ctccgttctaaaatacatgactcaactt 121
           ||||||||||||||| ||||||||||||
Sbjct: 85  ctccgttctaaaatagatgactcaactt 58



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 1  tccaaaatagatgacccaactttatacta 29
          ||||||||||||||| ||||||| |||||
Sbjct: 7  tccaaaatagatgactcaactttgtacta 35



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 94  ctccgttctaaaatacatgactcaactt 121
           |||||||| |||||| ||||||||||||
Sbjct: 1   ctccgttccaaaatagatgactcaactt 28



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 124 tagtataaagttgagtcatgtattttag 151
           ||||| ||||||||||||| ||||||||
Sbjct: 51  tagtacaaagttgagtcatctattttag 78




>50920_osa-miRf11705-akr:pmrd
          Length = 134

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 86  actactccctccgttctaaaata 108
           |||||||||||||||||||||||
Sbjct: 10  actactccctccgttctaaaata 32