miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Minus
Query: 11 tactccctccataaagaaatataagaacatttaggtcactactttagttatctaaacgct 70
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Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34
Query: 71 cttatatttctttacagagggagtaca 97
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Sbjct: 33 ctaatatttctttacagagggagtaca 7
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 55 tagttatctaaacgctcttatatttctttacagagggagtac 96
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Sbjct: 53 tagtgatctaaacgctcttatatttctttacggagggagtac 94
>48304_ave-miR1120:pmrd
Length = 85
Score = 79.8 bits (40), Expect = 4e-16
Identities = 75/87 (86%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 10 atactccctccataaagaaatataagaacatttaggtcactactttagttatctaaacgc 69
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Sbjct: 83 atactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgc 30
Query: 70 tcttatatttctttacagagggagtac 96
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Sbjct: 29 tcttatatttctttacagagggagtac 3
Score = 75.8 bits (38), Expect = 6e-15
Identities = 73/85 (85%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 11 tactccctccataaagaaatataagaacatttaggtcactactttagttatctaaacgct 70
||||||||| ||||||||||||||| | ||||| |||||| | |||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 57
Query: 71 cttatatttctttacagagggagta 95
|||||||||||||||||||||||||
Sbjct: 58 cttatatttctttacagagggagta 82
>54756_tmo-miR1120:pmrd
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 11 tactccctccataaagaaatataagaacatttaggtcactactttagttatctaaacgct 70
||||||||| |||| ||||||||| | ||||| ||||||||||||| ||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 71 cttatatttctttacagaggga 92
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Sbjct: 25 cttatattagtttacagaggga 4
Score = 48.1 bits (24), Expect = 1e-06
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 28 aatataagaacatttaggtcactactttagttatctaaacgctcttatatttctttacag 87
||||||||| | ||||| |||||| |||| ||||||| | ||||||||| |||||||
Sbjct: 18 aatataagaccttttagatcactaaagtagtgatctaaaaggtcttatattagtttacag 77
Query: 88 agggagta 95
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Sbjct: 78 agggagta 85
>54753_tae-miR2033b:pmrd
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 55 tagttatctaaacgctcttatatttctttacagagggagta 95
|||| |||||||| |||||||||||||||||||| ||||||
Sbjct: 32 tagtgatctaaacactcttatatttctttacagaaggagta 72
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tactccctccataaagaaatataaga 36
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Sbjct: 1 tactccctccataaagaaatataaga 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 66 acgctcttatatttctttacagagggagta 95
||||||||||||||||||| |||||||||
Sbjct: 30 acgctcttatatttctttatggagggagta 1
>54761_tur-miR1120:pmrd
Length = 84
Score = 52.0 bits (26), Expect = 8e-08
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 11 tactccctccataaagaaatataagaacatttaggtcactactttagttatctaaacgct 70
||||||||| |||| ||||||||| | ||||| ||||||||| ||| ||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaaggt 26
Query: 71 cttatatttctttacagaggga 92
|||||||| ||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4
Score = 42.1 bits (21), Expect = 8e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 55 tagttatctaaacgctcttatatttctttacagagggagta 95
|||| ||||||| | ||||||||| |||||||||||||||
Sbjct: 44 tagtgatctaaaaggtcttatattagtttacagagggagta 84
>54752_tae-miR2033a:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 74 atatttctttacagagggagta 95
||||||||||||||||||||||
Sbjct: 75 atatttctttacagagggagta 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tcttatatttctttacagag 89
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Sbjct: 41 tcttatatttctttacagag 60
