miRNEST 2.0, an integrative microRNA resource :: BLAST
>54686_tae-miR319a:pmrd
Length = 196
Score = 389 bits (196), Expect = e-109
Identities = 196/196 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaagcatggaggaggaaagagagaacaatctcccgctgcattc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gggagctcccttcagtccaagcatggaggaggaaagagagaacaatctcccgctgcattc 137
Query: 67 gctcattcgcacagtacatattgtaacatactggtatgccctggactagtctcatatcta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 gctcattcgcacagtacatattgtaacatactggtatgccctggactagtctcatatcta 77
Query: 127 ctgtgtgctcgagtgaatgagtcggcagctcgttcaatccccgctacctcccatgagtgg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 ctgtgtgctcgagtgaatgagtcggcagctcgttcaatccccgctacctcccatgagtgg 17
Query: 187 actgaagtgagctccc 202
||||||||||||||||
Sbjct: 16 actgaagtgagctccc 1
>46993_ath-miR319b:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaagcat 30
|||||||||||||||||||||||||
Sbjct: 172 agggagctcccttcagtccaagcat 148
>54846_vvi-miR319f:pmrd
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaagca 29
||||||||||||||||||||||||
Sbjct: 182 agggagctcccttcagtccaagca 159
>54844_vvi-miR319c:pmrd
Length = 182
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaagca 29
||||||||||||||||||||||||
Sbjct: 171 agggagctcccttcagtccaagca 148
Score = 44.1 bits (22), Expect = 4e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 140 tgaatgagtcggcagctcgttcaatccccgctacctcccatgagtggactgaag 193
||||||||||||||||| |||||| || || || ||||||||||||||||||
Sbjct: 72 tgaatgagtcggcagctaattcaat-cctactgccacccatgagtggactgaag 20
>51710_ptc-miR319d:pmrd
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaagca 29
||||||||||||||||||||||||
Sbjct: 185 agggagctcccttcagtccaagca 162
>51709_ptc-miR319c:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaagca 29
||||||||||||||||||||||||
Sbjct: 188 agggagctcccttcagtccaagca 165
>54843_vvi-miR319b:pmrd
Length = 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 183 agggagctcccttcagtccaag 162
>54754_tar-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>54670_svi-miR159:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>54583_smo-miR319:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 206 agggagctcccttcagtccaag 185
>54391_rin-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>51713_ptc-miR319g:pmrd
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaagca 29
||||||||||||||||||||||
Sbjct: 194 ggagctcccttcagtccaagca 173
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 131 gtgctcgagtgaatgagtcggcagctcgttcaa 163
||||| || ||||||||||||||||| ||||||
Sbjct: 84 gtgcttgaatgaatgagtcggcagctagttcaa 52
>51712_ptc-miR319f:pmrd
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaagca 29
||||||||||||||||||||||
Sbjct: 192 ggagctcccttcagtccaagca 171
>51707_ptc-miR319a:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 47/54 (87%), Gaps = 1/54 (1%)
Strand = Plus / Minus
Query: 140 tgaatgagtcggcagctcgttcaatccccgctacctcccatgagtggactgaag 193
||||||||||||||||| || ||||| ||||| ||||||||||||||||||
Sbjct: 72 tgaatgagtcggcagctaattaaatccta-ctaccacccatgagtggactgaag 20
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 180 agggagctcccttcagtccaag 159
>51351_ppl-miR319:pmrd
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaagca 29
||||||||||||||||||||||
Sbjct: 192 ggagctcccttcagtccaagca 171
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 131 gtgctcgagtgaatgagtcggcagctcgttcaatccc 167
||||| || ||||||||||||||||| |||||||||
Sbjct: 83 gtgcttgaatgaatgagtcggcagctaattcaatccc 47
>48788_nof-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>48694_mma-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>48573_gma-miR319b:pmrd
Length = 208
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 190 agggagctcccttcagtccaag 169
>48572_gma-miR319a:pmrd
Length = 207
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 189 agggagctcccttcagtccaag 168
>48479_fal-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>48476_dso-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>48422_cor-miR159:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 183 gagggagctcccttcagtccaa 162
>48421_cmi-miR159:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 183 gagggagctcccttcagtccaa 162
>48415_bvl-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>47656_ath-miRf10556-akr:pmrd
Length = 203
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 16 gagggagctcccttcagtccaa 37
>46992_ath-miR319a:pmrd
Length = 176
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 175 gagggagctcccttcagtccaa 154
>46884_aqc-miR319:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaag 27
||||||||||||||||||||||
Sbjct: 175 agggagctcccttcagtccaag 154
>46860_ape-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>46856_ahi-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>46855_aha-miR159:pmrd
Length = 192
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 182 gagggagctcccttcagtccaa 161
>46846_acb-miR159:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaa 26
||||||||||||||||||||||
Sbjct: 181 gagggagctcccttcagtccaa 160
>55052_zma-miR319d:pmrd
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaagca 29
|||||||| ||||||||||||||||
Sbjct: 195 gagggagcacccttcagtccaagca 171
>55050_zma-miR319b:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaagca 29
|||||||| ||||||||||||||||
Sbjct: 196 gagggagcacccttcagtccaagca 172
>54468_sbi-miR319:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaagca 29
|||||||| ||||||||||||||||
Sbjct: 212 gagggagcacccttcagtccaagca 188
>54380_pvu-miR319c:pmrd
Length = 734
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaagc 28
|||||||||||||||||||||
Sbjct: 428 ggagctcccttcagtccaagc 408
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 9 gagctcccttcagtccaagca 29
|||||||||||||||||||||
Sbjct: 170 gagctcccttcagtccaagca 150
>51708_ptc-miR319b:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaa 26
|||||||||||||||||||||
Sbjct: 177 agggagctcccttcagtccaa 157
>51390_ppt-miR319e:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 167 gggagctcccttcagtccaag 147
>51389_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 165 gggagctcccttcagtccaag 145
>51388_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 165 gggagctcccttcagtccaag 145
>51387_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 165 gggagctcccttcagtccaag 145
>51386_ppt-miR319c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 174 gggagctcccttcagtccaag 154
>48915_osa-miR319b:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 5 gagggagctcccttcagtccaagca 29
|||||||| ||||||||||||||||
Sbjct: 189 gagggagcacccttcagtccaagca 165
>48687_ltu-miR319:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaag 27
|||||||||||||||||||||
Sbjct: 167 gggagctcccttcagtccaag 147
>48478_ech-miR159:pmrd
Length = 192
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaa 26
|||||||||||||||||||||
Sbjct: 181 agggagctcccttcagtccaa 161
>48429_crb-miR159:pmrd
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 agggagctcccttcagtccaa 26
|||||||||||||||||||||
Sbjct: 183 agggagctcccttcagtccaa 163
>54847_vvi-miR319g:pmrd
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 gggagctcccttcagtccaa 26
||||||||||||||||||||
Sbjct: 211 gggagctcccttcagtccaa 192
>51385_ppt-miR319b:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaag 27
||||||||||||||||||||
Sbjct: 159 ggagctcccttcagtccaag 140
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 8 ggagctcccttcagtccaag 27
||||||||||||||||||||
Sbjct: 167 ggagctcccttcagtccaag 148
